RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 UTRNP46939 3433 aa7.55□□□□□ -1.2
ARFGEF1-201ENST00000262215 ADM2Q7Z4H4 148 aa7.54□□□□□ -1.2
ARFGEF1-201ENST00000262215 MAST4O15021 2626 aa7.54□□□□□ -1.2
ARFGEF1-201ENST00000262215 Q5VSD8 79 aa7.53□□□□□ -1.2
ARFGEF1-201ENST00000262215 PRRC2CQ9Y520 2896 aaKnown RBP7.51□□□□□ -1.21
ARFGEF1-201ENST00000262215 SEC61BP60468 96 aaKnown RBP7.49□□□□□ -1.21
ARFGEF1-201ENST00000262215 CEP350Q5VT06 3117 aa7.49□□□□□ -1.21
ARFGEF1-201ENST00000262215 PLAC8Q9NZF1 115 aa7.49□□□□□ -1.21
ARFGEF1-201ENST00000262215 LINC00472Q9H8W2 130 aa7.48□□□□□ -1.21
ARFGEF1-201ENST00000262215 KRTAP1-3Q8IUG1 177 aa7.47□□□□□ -1.21
ARFGEF1-201ENST00000262215 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.22
ARFGEF1-201ENST00000262215 KRTAP16-1A8MUX0 517 aa7.45□□□□□ -1.22
ARFGEF1-201ENST00000262215 KRTAP1-1Q07627 177 aa7.45□□□□□ -1.22
ARFGEF1-201ENST00000262215 KRTAP26-1Q6PEX3 210 aa7.42□□□□□ -1.22
ARFGEF1-201ENST00000262215 ITPR3Q14573 2671 aa7.41□□□□□ -1.22
ARFGEF1-201ENST00000262215 STAB1Q9NY15 2570 aa7.38□□□□□ -1.23
ARFGEF1-201ENST00000262215 KRTAP10-1P60331 282 aa7.38□□□□□ -1.23
ARFGEF1-201ENST00000262215 DMBT1Q9UGM3 2413 aaPredicted RBP7.38□□□□□ -1.23
ARFGEF1-201ENST00000262215 SPRR1AP35321 89 aa7.38□□□□□ -1.23
ARFGEF1-201ENST00000262215 KRTAP10-2P60368 255 aa7.38□□□□□ -1.23
ARFGEF1-201ENST00000262215 A8MU10 97 aa7.37□□□□□ -1.23
ARFGEF1-201ENST00000262215 KRTAP1-5Q9BYS1 174 aa7.37□□□□□ -1.23
ARFGEF1-201ENST00000262215 Q6ZR54 194 aa7.37□□□□□ -1.23
ARFGEF1-201ENST00000262215 AKAP13Q12802 2813 aa7.37□□□□□ -1.23
ARFGEF1-201ENST00000262215 C5orf42Q9H799 3197 aa7.32□□□□□ -1.24
ARFGEF1-201ENST00000262215 NDUFAF8A1L188 74 aa7.32□□□□□ -1.24
ARFGEF1-201ENST00000262215 STAB2Q8WWQ8 2551 aa7.31□□□□□ -1.24
ARFGEF1-201ENST00000262215 NBEAL1Q6ZS30 2694 aa7.3□□□□□ -1.24
ARFGEF1-201ENST00000262215 A6NN06 94 aa7.29□□□□□ -1.24
ARFGEF1-201ENST00000262215 SPRR1BP22528 89 aa7.28□□□□□ -1.24
ARFGEF1-201ENST00000262215 DNAH12Q6ZR08 3092 aa7.28□□□□□ -1.24
ARFGEF1-201ENST00000262215 PANO1I0J062 215 aa7.28□□□□□ -1.24
ARFGEF1-201ENST00000262215 CFAP46Q8IYW2 2715 aa7.28□□□□□ -1.24
ARFGEF1-201ENST00000262215 FLNAP21333 2647 aaKnown RBP7.28□□□□□ -1.24
ARFGEF1-201ENST00000262215 A0A087X002 238 aa7.27□□□□□ -1.25
ARFGEF1-201ENST00000262215 NOTCH2NLQ7Z3S9 236 aa7.27□□□□□ -1.25
ARFGEF1-201ENST00000262215 A0A0C4DFX4 3053 aa7.25□□□□□ -1.25
ARFGEF1-201ENST00000262215 PCNTO95613 3336 aa7.25□□□□□ -1.25
ARFGEF1-201ENST00000262215 KRTAP25-1Q3LHN0 102 aa7.23□□□□□ -1.25
ARFGEF1-201ENST00000262215 A8MUU9 505 aa7.23□□□□□ -1.25
ARFGEF1-201ENST00000262215 C10orf95Q9H7T3 257 aa7.22□□□□□ -1.25
ARFGEF1-201ENST00000262215 CHD6Q8TD26 2715 aa7.22□□□□□ -1.25
ARFGEF1-201ENST00000262215 KRTAP29-1A8MX34 341 aaPredicted RBP7.19□□□□□ -1.26
ARFGEF1-201ENST00000262215 CFAP54Q96N23 3096 aa7.17□□□□□ -1.26
ARFGEF1-201ENST00000262215 LCE6AA0A183 80 aa7.16□□□□□ -1.26
ARFGEF1-201ENST00000262215 CENPEQ02224 2701 aa7.13□□□□□ -1.27
ARFGEF1-201ENST00000262215 ASB16-AS1Q495Z4 193 aa7.13□□□□□ -1.27
ARFGEF1-201ENST00000262215 TEX15Q9BXT5 2789 aa7.12□□□□□ -1.27
ARFGEF1-201ENST00000262215 FREM2Q5SZK8 3169 aa7.1□□□□□ -1.27
ARFGEF1-201ENST00000262215 NOTCH1P46531 2555 aa7.09□□□□□ -1.28
ARFGEF1-201ENST00000262215 HELZ2Q9BYK8 2649 aaKnown RBP7.08□□□□□ -1.28
ARFGEF1-201ENST00000262215 SETXQ7Z333 2677 aaKnown RBP7.06□□□□□ -1.28
ARFGEF1-201ENST00000262215 KRTAP4-16G5E9R7 235 aaPredicted RBP7.06□□□□□ -1.28
ARFGEF1-201ENST00000262215 KRTAP11-1Q8IUC1 163 aa7.06□□□□□ -1.28
ARFGEF1-201ENST00000262215 LAMA2P24043 3122 aaKnown RBP7.04□□□□□ -1.28
ARFGEF1-201ENST00000262215 TNP1P09430 55 aa7.04□□□□□ -1.28
ARFGEF1-201ENST00000262215 BAHCC1Q9P281 2608 aa7.02□□□□□ -1.28
ARFGEF1-201ENST00000262215 TEP1Q99973 2627 aaKnown RBP7.02□□□□□ -1.29
ARFGEF1-201ENST00000262215 UNC79Q9P2D8 2635 aa7.01□□□□□ -1.29
ARFGEF1-201ENST00000262215 BRCA2P51587 3418 aa7□□□□□ -1.29
ARFGEF1-201ENST00000262215 COL6A5A8TX70 2615 aa6.98□□□□□ -1.29
ARFGEF1-201ENST00000262215 A0A1B0GVY2 172 aa6.96□□□□□ -1.3
ARFGEF1-201ENST00000262215 KRTAP10-8P60410 259 aa6.95□□□□□ -1.3
ARFGEF1-201ENST00000262215 GCN1Q92616 2671 aaKnown RBP6.95□□□□□ -1.3
ARFGEF1-201ENST00000262215 NBEAL2Q6ZNJ1 2754 aa6.93□□□□□ -1.3
ARFGEF1-201ENST00000262215 KRTAP13-2Q52LG2 175 aa6.9□□□□□ -1.3
ARFGEF1-201ENST00000262215 CHD7Q9P2D1 2997 aa6.88□□□□□ -1.31
ARFGEF1-201ENST00000262215 FRYQ5TBA9 3013 aa6.88□□□□□ -1.31
ARFGEF1-201ENST00000262215 KMT2BQ9UMN6 2715 aaPredicted RBP6.88□□□□□ -1.31
ARFGEF1-201ENST00000262215 KRTAP7-1Q8IUC3 87 aa6.86□□□□□ -1.31
ARFGEF1-201ENST00000262215 NSD1Q96L73 2696 aaPredicted RBP6.82□□□□□ -1.32
ARFGEF1-201ENST00000262215 MGAQ8IWI9 3026 aa6.82□□□□□ -1.32
ARFGEF1-201ENST00000262215 MAP1AP78559 2803 aaPredicted RBP6.78□□□□□ -1.32
ARFGEF1-201ENST00000262215 TRIOO75962 3097 aa6.76□□□□□ -1.33
ARFGEF1-201ENST00000262215 Q6ZRN7 208 aaPredicted RBP6.75□□□□□ -1.33
ARFGEF1-201ENST00000262215 RPS29P62273 56 aaKnown RBP6.75□□□□□ -1.33
ARFGEF1-201ENST00000262215 IGSF10Q6WRI0 2623 aa6.74□□□□□ -1.33
ARFGEF1-201ENST00000262215 LAMA3Q16787 3333 aa6.73□□□□□ -1.33
ARFGEF1-201ENST00000262215 MKI67P46013 3256 aaKnown RBP6.73□□□□□ -1.33
ARFGEF1-201ENST00000262215 WDFY4Q6ZS81 3184 aa6.72□□□□□ -1.33
ARFGEF1-201ENST00000262215 CELSR3Q9NYQ7 3312 aa6.71□□□□□ -1.34
ARFGEF1-201ENST00000262215 XIRP2A4UGR9 3374 aa6.7□□□□□ -1.34
ARFGEF1-201ENST00000262215 REV3LO60673 3130 aa6.7□□□□□ -1.34
ARFGEF1-201ENST00000262215 HTTP42858 3142 aa6.69□□□□□ -1.34
ARFGEF1-201ENST00000262215 CDH23Q9H251 3354 aa6.68□□□□□ -1.34
ARFGEF1-201ENST00000262215 CHD9Q3L8U1 2897 aa6.68□□□□□ -1.34
ARFGEF1-201ENST00000262215 DNAH14Q0VDD8 3507 aa6.67□□□□□ -1.34
ARFGEF1-201ENST00000262215 DMXL2Q8TDJ6 3036 aa6.66□□□□□ -1.34
ARFGEF1-201ENST00000262215 PRUNE2Q8WUY3 3088 aa6.66□□□□□ -1.34
ARFGEF1-201ENST00000262215 TRANK1O15050 2925 aa6.66□□□□□ -1.34
ARFGEF1-201ENST00000262215 KRTAP10-10P60014 251 aa6.65□□□□□ -1.34
ARFGEF1-201ENST00000262215 KRTAP13-1Q8IUC0 172 aa6.65□□□□□ -1.34
ARFGEF1-201ENST00000262215 CRYBG3Q68DQ2 2970 aa6.65□□□□□ -1.35
ARFGEF1-201ENST00000262215 UNC80Q8N2C7 3258 aa6.65□□□□□ -1.35
ARFGEF1-201ENST00000262215 RANBP2P49792 3224 aaKnown RBP6.65□□□□□ -1.35
ARFGEF1-201ENST00000262215 P0C880 135 aa6.65□□□□□ -1.35
ARFGEF1-201ENST00000262215 ASH1LQ9NR48 2969 aaKnown RBP6.64□□□□□ -1.35
ARFGEF1-201ENST00000262215 UBR5O95071 2799 aaPredicted RBP6.64□□□□□ -1.35
ARFGEF1-201ENST00000262215 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
ARFGEF1-201ENST00000262215 ZNF292O60281 2723 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms