RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 WDFY4Q6ZS81 3184 aa7.49□□□□□ -1.21
SPG11-201ENST00000261866 LCA10Q71F78 164 aa7.48□□□□□ -1.21
SPG11-201ENST00000261866 A0A1B0GU33 70 aa7.48□□□□□ -1.21
SPG11-201ENST00000261866 MAST4O15021 2626 aa7.48□□□□□ -1.21
SPG11-201ENST00000261866 Q1T7F1 81 aa7.48□□□□□ -1.21
SPG11-201ENST00000261866 KRTAP10-1P60331 282 aa7.47□□□□□ -1.21
SPG11-201ENST00000261866 KLKP1Q107X0 134 aa7.46□□□□□ -1.21
SPG11-201ENST00000261866 PLAC8Q9NZF1 115 aa7.46□□□□□ -1.21
SPG11-201ENST00000261866 DNAH14Q0VDD8 3507 aa7.44□□□□□ -1.22
SPG11-201ENST00000261866 HRES1P13985 223 aa7.44□□□□□ -1.22
SPG11-201ENST00000261866 PRAC1Q96KF2 57 aa7.44□□□□□ -1.22
SPG11-201ENST00000261866 A0A0C4DFX4 3053 aa7.43□□□□□ -1.22
SPG11-201ENST00000261866 SZT2Q5T011 3432 aa7.42□□□□□ -1.22
SPG11-201ENST00000261866 Q8N9P0 234 aaPredicted RBP7.42□□□□□ -1.22
SPG11-201ENST00000261866 CENPEQ02224 2701 aa7.41□□□□□ -1.22
SPG11-201ENST00000261866 R4GN34 69 aa7.4□□□□□ -1.22
SPG11-201ENST00000261866 LCE6AA0A183 80 aa7.4□□□□□ -1.23
SPG11-201ENST00000261866 ZCCHC13Q8WW36 166 aaKnown RBP7.38□□□□□ -1.23
SPG11-201ENST00000261866 FAM229BQ4G0N7 80 aa7.38□□□□□ -1.23
SPG11-201ENST00000261866 CSAG1Q6PB30 78 aa7.37□□□□□ -1.23
SPG11-201ENST00000261866 SPINK7P58062 85 aa7.36□□□□□ -1.23
SPG11-201ENST00000261866 AKAP13Q12802 2813 aa7.36□□□□□ -1.23
SPG11-201ENST00000261866 PANO1I0J062 215 aa7.35□□□□□ -1.23
SPG11-201ENST00000261866 OCR1Q9BZK8 76 aa7.35□□□□□ -1.23
SPG11-201ENST00000261866 REV3LO60673 3130 aa7.35□□□□□ -1.23
SPG11-201ENST00000261866 TEP1Q99973 2627 aaKnown RBP7.35□□□□□ -1.23
SPG11-201ENST00000261866 MMP24-AS1A0A0U1RRL7 71 aa7.34□□□□□ -1.23
SPG11-201ENST00000261866 H1FX-AS1Q4G0G2 97 aa7.32□□□□□ -1.24
SPG11-201ENST00000261866 SPANXA2-OT1Q8N9U9 137 aa7.32□□□□□ -1.24
SPG11-201ENST00000261866 TEX15Q9BXT5 2789 aa7.32□□□□□ -1.24
SPG11-201ENST00000261866 VPS13AQ96RL7 3174 aa7.31□□□□□ -1.24
SPG11-201ENST00000261866 Q5W150 140 aa7.3□□□□□ -1.24
SPG11-201ENST00000261866 M0QZ58 72 aa7.3□□□□□ -1.24
SPG11-201ENST00000261866 CHD6Q8TD26 2715 aa7.28□□□□□ -1.24
SPG11-201ENST00000261866 TRANK1O15050 2925 aa7.27□□□□□ -1.24
SPG11-201ENST00000261866 PLAC4Q8WY50 150 aa7.27□□□□□ -1.25
SPG11-201ENST00000261866 VCANP13611 3396 aa7.27□□□□□ -1.25
SPG11-201ENST00000261866 SPRR1AP35321 89 aa7.26□□□□□ -1.25
SPG11-201ENST00000261866 H3BS24 57 aa7.26□□□□□ -1.25
SPG11-201ENST00000261866 SEC61BP60468 96 aaKnown RBP7.26□□□□□ -1.25
SPG11-201ENST00000261866 KRTAP26-1Q6PEX3 210 aa7.25□□□□□ -1.25
SPG11-201ENST00000261866 COL6A3P12111 3177 aa7.25□□□□□ -1.25
SPG11-201ENST00000261866 DMAC1Q96GE9 116 aa7.24□□□□□ -1.25
SPG11-201ENST00000261866 SPATA8Q6RVD6 105 aa7.24□□□□□ -1.25
SPG11-201ENST00000261866 DSPP15924 2871 aaKnown RBP7.23□□□□□ -1.25
SPG11-201ENST00000261866 ADM2Q7Z4H4 148 aa7.23□□□□□ -1.25
SPG11-201ENST00000261866 LINC00472Q9H8W2 130 aa7.21□□□□□ -1.26
SPG11-201ENST00000261866 A0A087X002 238 aa7.2□□□□□ -1.26
SPG11-201ENST00000261866 SETXQ7Z333 2677 aaKnown RBP7.2□□□□□ -1.26
SPG11-201ENST00000261866 FRYQ5TBA9 3013 aa7.19□□□□□ -1.26
SPG11-201ENST00000261866 A0A0A0MQY5 61 aa7.19□□□□□ -1.26
SPG11-201ENST00000261866 CYSTM1Q9H1C7 97 aa7.18□□□□□ -1.26
SPG11-201ENST00000261866 SPTBN5Q9NRC6 3674 aaKnown RBP7.17□□□□□ -1.26
SPG11-201ENST00000261866 Q75L30 129 aa7.15□□□□□ -1.27
SPG11-201ENST00000261866 MAP1AP78559 2803 aaPredicted RBP7.15□□□□□ -1.27
SPG11-201ENST00000261866 LAMA1P25391 3075 aa7.14□□□□□ -1.27
SPG11-201ENST00000261866 FP248Q71RG6 208 aaPredicted RBP7.14□□□□□ -1.27
SPG11-201ENST00000261866 BAHCC1Q9P281 2608 aa7.14□□□□□ -1.27
SPG11-201ENST00000261866 STAB1Q9NY15 2570 aa7.13□□□□□ -1.27
SPG11-201ENST00000261866 ZNF292O60281 2723 aa7.13□□□□□ -1.27
SPG11-201ENST00000261866 SPRR1BP22528 89 aa7.13□□□□□ -1.27
SPG11-201ENST00000261866 KRTAP11-1Q8IUC1 163 aa7.12□□□□□ -1.27
SPG11-201ENST00000261866 Q6ZR54 194 aa7.12□□□□□ -1.27
SPG11-201ENST00000261866 CFAP47Q6ZTR5 3102 aa7.1□□□□□ -1.27
SPG11-201ENST00000261866 COL6A5A8TX70 2615 aa7.1□□□□□ -1.27
SPG11-201ENST00000261866 ROMO1P60602 79 aa7.1□□□□□ -1.27
SPG11-201ENST00000261866 GCN1Q92616 2671 aaKnown RBP7.09□□□□□ -1.27
SPG11-201ENST00000261866 NBEAL2Q6ZNJ1 2754 aa7.08□□□□□ -1.28
SPG11-201ENST00000261866 NBEAL1Q6ZS30 2694 aa7.08□□□□□ -1.28
SPG11-201ENST00000261866 NOTCH2NLQ7Z3S9 236 aa7.08□□□□□ -1.28
SPG11-201ENST00000261866 RPL37P61927 97 aaKnown RBP7.07□□□□□ -1.28
SPG11-201ENST00000261866 Q5VV11 94 aa7.07□□□□□ -1.28
SPG11-201ENST00000261866 IGSF10Q6WRI0 2623 aa7.07□□□□□ -1.28
SPG11-201ENST00000261866 C20orf166-AS1Q96NR2 134 aa7.06□□□□□ -1.28
SPG11-201ENST00000261866 LINC01558Q9Y6Z2 57 aa7.06□□□□□ -1.28
SPG11-201ENST00000261866 SPEGQ15772 3267 aa7.05□□□□□ -1.28
SPG11-201ENST00000261866 CRYBG3Q68DQ2 2970 aa7.05□□□□□ -1.28
SPG11-201ENST00000261866 OXTP01178 125 aa7.04□□□□□ -1.28
SPG11-201ENST00000261866 UNC79Q9P2D8 2635 aa7.04□□□□□ -1.28
SPG11-201ENST00000261866 BOD1L1Q8NFC6 3051 aa7.04□□□□□ -1.28
SPG11-201ENST00000261866 KALRNO60229 2985 aa7□□□□□ -1.29
SPG11-201ENST00000261866 EYSQ5T1H1 3165 aa7□□□□□ -1.29
SPG11-201ENST00000261866 NOTCH1P46531 2555 aa7□□□□□ -1.29
SPG11-201ENST00000261866 KRTAP4-16G5E9R7 235 aaPredicted RBP7□□□□□ -1.29
SPG11-201ENST00000261866 Q5XG85 94 aa6.99□□□□□ -1.29
SPG11-201ENST00000261866 LRBAP50851 2863 aa6.99□□□□□ -1.29
SPG11-201ENST00000261866 ATMQ13315 3056 aa6.98□□□□□ -1.29
SPG11-201ENST00000261866 A8MU10 97 aa6.98□□□□□ -1.29
SPG11-201ENST00000261866 DMBT1Q9UGM3 2413 aaPredicted RBP6.98□□□□□ -1.29
SPG11-201ENST00000261866 Q6ZRN7 208 aaPredicted RBP6.97□□□□□ -1.29
SPG11-201ENST00000261866 TACC2O95359 2948 aa6.96□□□□□ -1.3
SPG11-201ENST00000261866 USP34Q70CQ2 3546 aa6.96□□□□□ -1.3
SPG11-201ENST00000261866 DMXL2Q8TDJ6 3036 aa6.95□□□□□ -1.3
SPG11-201ENST00000261866 MYO15AQ9UKN7 3530 aa6.94□□□□□ -1.3
SPG11-201ENST00000261866 FRYLO94915 3013 aa6.94□□□□□ -1.3
SPG11-201ENST00000261866 KRTAP7-1Q8IUC3 87 aa6.93□□□□□ -1.3
SPG11-201ENST00000261866 COL12A1Q99715 3063 aa6.93□□□□□ -1.3
SPG11-201ENST00000261866 UBR5O95071 2799 aaPredicted RBP6.92□□□□□ -1.3
SPG11-201ENST00000261866 ITPR2Q14571 2701 aa6.92□□□□□ -1.3
SPG11-201ENST00000261866 KRTAP13-2Q52LG2 175 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms