RNA–Protein interactions for RNA: ENST00000261439.8

TBC1D1-201, Transcript of TBC1 domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBC1D1, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-201ENST00000261439 CHD7Q9P2D1 2997 aa8.91□□□□□ -0.98
TBC1D1-201ENST00000261439 Q5W150 140 aa8.91□□□□□ -0.98
TBC1D1-201ENST00000261439 Q6ZSA8 131 aa8.91□□□□□ -0.98
TBC1D1-201ENST00000261439 ZCCHC13Q8WW36 166 aaKnown RBP8.9□□□□□ -0.98
TBC1D1-201ENST00000261439 CAMK2N1Q7Z7J9 78 aa8.89□□□□□ -0.99
TBC1D1-201ENST00000261439 AKAP13Q12802 2813 aa8.89□□□□□ -0.99
TBC1D1-201ENST00000261439 DMAC1Q96GE9 116 aa8.85□□□□□ -0.99
TBC1D1-201ENST00000261439 PLAC8Q9NZF1 115 aa8.84□□□□□ -0.99
TBC1D1-201ENST00000261439 SPRR1BP22528 89 aa8.83□□□□□ -1
TBC1D1-201ENST00000261439 CENPEQ02224 2701 aa8.82□□□□□ -1
TBC1D1-201ENST00000261439 MKI67P46013 3256 aaKnown RBP8.82□□□□□ -1
TBC1D1-201ENST00000261439 CHD6Q8TD26 2715 aa8.81□□□□□ -1
TBC1D1-201ENST00000261439 CHD9Q3L8U1 2897 aa8.8□□□□□ -1
TBC1D1-201ENST00000261439 S4R3F8 94 aa8.79□□□□□ -1
TBC1D1-201ENST00000261439 KRTAP26-1Q6PEX3 210 aa8.78□□□□□ -1
TBC1D1-201ENST00000261439 LINC00483Q53H64 154 aa8.77□□□□□ -1.01
TBC1D1-201ENST00000261439 KRTAP1-5Q9BYS1 174 aa8.77□□□□□ -1.01
TBC1D1-201ENST00000261439 CFAP46Q8IYW2 2715 aa8.73□□□□□ -1.01
TBC1D1-201ENST00000261439 HELZ2Q9BYK8 2649 aaKnown RBP8.71□□□□□ -1.01
TBC1D1-201ENST00000261439 NBEAL1Q6ZS30 2694 aa8.69□□□□□ -1.02
TBC1D1-201ENST00000261439 STAB1Q9NY15 2570 aa8.68□□□□□ -1.02
TBC1D1-201ENST00000261439 MGAQ8IWI9 3026 aa8.68□□□□□ -1.02
TBC1D1-201ENST00000261439 TRANK1O15050 2925 aa8.68□□□□□ -1.02
TBC1D1-201ENST00000261439 LAMA2P24043 3122 aaKnown RBP8.68□□□□□ -1.02
TBC1D1-201ENST00000261439 FLG2Q5D862 2391 aaPredicted RBP8.66□□□□□ -1.02
TBC1D1-201ENST00000261439 M0R2T5 61 aa8.66□□□□□ -1.02
TBC1D1-201ENST00000261439 RPL37P61927 97 aaKnown RBP8.65□□□□□ -1.02
TBC1D1-201ENST00000261439 R4GN34 69 aa8.65□□□□□ -1.02
TBC1D1-201ENST00000261439 GCN1Q92616 2671 aaKnown RBP8.65□□□□□ -1.02
TBC1D1-201ENST00000261439 RANBP2P49792 3224 aaKnown RBP8.65□□□□□ -1.02
TBC1D1-201ENST00000261439 ROMO1P60602 79 aa8.65□□□□□ -1.03
TBC1D1-201ENST00000261439 KRTAP29-1A8MX34 341 aaPredicted RBP8.64□□□□□ -1.03
TBC1D1-201ENST00000261439 UNC79Q9P2D8 2635 aa8.64□□□□□ -1.03
TBC1D1-201ENST00000261439 Q6ZR54 194 aa8.63□□□□□ -1.03
TBC1D1-201ENST00000261439 KRTAP4-16G5E9R7 235 aaPredicted RBP8.63□□□□□ -1.03
TBC1D1-201ENST00000261439 H1FX-AS1Q4G0G2 97 aa8.63□□□□□ -1.03
TBC1D1-201ENST00000261439 LAMA3Q16787 3333 aa8.63□□□□□ -1.03
TBC1D1-201ENST00000261439 A0A0A0MQY5 61 aa8.62□□□□□ -1.03
TBC1D1-201ENST00000261439 CDH23Q9H251 3354 aa8.62□□□□□ -1.03
TBC1D1-201ENST00000261439 TEX15Q9BXT5 2789 aa8.61□□□□□ -1.03
TBC1D1-201ENST00000261439 SPATA8Q6RVD6 105 aa8.6□□□□□ -1.03
TBC1D1-201ENST00000261439 PANO1I0J062 215 aa8.59□□□□□ -1.03
TBC1D1-201ENST00000261439 NOTCH1P46531 2555 aa8.58□□□□□ -1.04
TBC1D1-201ENST00000261439 KRTAP10-1P60331 282 aa8.55□□□□□ -1.04
TBC1D1-201ENST00000261439 WDFY4Q6ZS81 3184 aa8.55□□□□□ -1.04
TBC1D1-201ENST00000261439 KRTAP10-2P60368 255 aa8.55□□□□□ -1.04
TBC1D1-201ENST00000261439 FREM2Q5SZK8 3169 aa8.55□□□□□ -1.04
TBC1D1-201ENST00000261439 A0A087X002 238 aa8.55□□□□□ -1.04
TBC1D1-201ENST00000261439 NOTCH2NLQ7Z3S9 236 aa8.55□□□□□ -1.04
TBC1D1-201ENST00000261439 NBEAL2Q6ZNJ1 2754 aa8.54□□□□□ -1.04
TBC1D1-201ENST00000261439 TRIOO75962 3097 aa8.54□□□□□ -1.04
TBC1D1-201ENST00000261439 DMBT1Q9UGM3 2413 aaPredicted RBP8.52□□□□□ -1.05
TBC1D1-201ENST00000261439 M0QZ58 72 aa8.52□□□□□ -1.05
TBC1D1-201ENST00000261439 TEP1Q99973 2627 aaKnown RBP8.51□□□□□ -1.05
TBC1D1-201ENST00000261439 UNC80Q8N2C7 3258 aa8.49□□□□□ -1.05
TBC1D1-201ENST00000261439 MAP1AP78559 2803 aaPredicted RBP8.48□□□□□ -1.05
TBC1D1-201ENST00000261439 ASB16-AS1Q495Z4 193 aa8.47□□□□□ -1.05
TBC1D1-201ENST00000261439 ADM2Q7Z4H4 148 aa8.46□□□□□ -1.06
TBC1D1-201ENST00000261439 XIRP2A4UGR9 3374 aa8.45□□□□□ -1.06
TBC1D1-201ENST00000261439 SZT2Q5T011 3432 aa8.45□□□□□ -1.06
TBC1D1-201ENST00000261439 A6NN06 94 aa8.45□□□□□ -1.06
TBC1D1-201ENST00000261439 Q5VSD8 79 aa8.44□□□□□ -1.06
TBC1D1-201ENST00000261439 FRYQ5TBA9 3013 aa8.44□□□□□ -1.06
TBC1D1-201ENST00000261439 KRTAP11-1Q8IUC1 163 aa8.44□□□□□ -1.06
TBC1D1-201ENST00000261439 COL6A5A8TX70 2615 aa8.42□□□□□ -1.06
TBC1D1-201ENST00000261439 SEC61BP60468 96 aaKnown RBP8.41□□□□□ -1.06
TBC1D1-201ENST00000261439 SPTBN5Q9NRC6 3674 aaKnown RBP8.41□□□□□ -1.06
TBC1D1-201ENST00000261439 A8MU10 97 aa8.4□□□□□ -1.07
TBC1D1-201ENST00000261439 STAB2Q8WWQ8 2551 aa8.38□□□□□ -1.07
TBC1D1-201ENST00000261439 PRUNE2Q8WUY3 3088 aa8.37□□□□□ -1.07
TBC1D1-201ENST00000261439 DNAH14Q0VDD8 3507 aa8.37□□□□□ -1.07
TBC1D1-201ENST00000261439 VPS13AQ96RL7 3174 aa8.37□□□□□ -1.07
TBC1D1-201ENST00000261439 LCE6AA0A183 80 aa8.36□□□□□ -1.07
TBC1D1-201ENST00000261439 KRTAP7-1Q8IUC3 87 aa8.36□□□□□ -1.07
TBC1D1-201ENST00000261439 KRTAP25-1Q3LHN0 102 aa8.35□□□□□ -1.07
TBC1D1-201ENST00000261439 ZNF292O60281 2723 aa8.34□□□□□ -1.07
TBC1D1-201ENST00000261439 CELSR3Q9NYQ7 3312 aa8.34□□□□□ -1.07
TBC1D1-201ENST00000261439 SETXQ7Z333 2677 aaKnown RBP8.33□□□□□ -1.08
TBC1D1-201ENST00000261439 UBR5O95071 2799 aaPredicted RBP8.31□□□□□ -1.08
TBC1D1-201ENST00000261439 DSPP15924 2871 aaKnown RBP8.3□□□□□ -1.08
TBC1D1-201ENST00000261439 KALRNO60229 2985 aa8.28□□□□□ -1.08
TBC1D1-201ENST00000261439 KRTAP16-1A8MUX0 517 aa8.27□□□□□ -1.08
TBC1D1-201ENST00000261439 REV3LO60673 3130 aa8.27□□□□□ -1.09
TBC1D1-201ENST00000261439 BAHCC1Q9P281 2608 aa8.25□□□□□ -1.09
TBC1D1-201ENST00000261439 PLAC4Q8WY50 150 aa8.22□□□□□ -1.09
TBC1D1-201ENST00000261439 Q6ZRN7 208 aaPredicted RBP8.2□□□□□ -1.1
TBC1D1-201ENST00000261439 NSD1Q96L73 2696 aaPredicted RBP8.19□□□□□ -1.1
TBC1D1-201ENST00000261439 NDUFAF8A1L188 74 aa8.19□□□□□ -1.1
TBC1D1-201ENST00000261439 KRTAP13-2Q52LG2 175 aa8.19□□□□□ -1.1
TBC1D1-201ENST00000261439 TNRC18O15417 2968 aaPredicted RBP8.17□□□□□ -1.1
TBC1D1-201ENST00000261439 KRTAP13-1Q8IUC0 172 aa8.17□□□□□ -1.1
TBC1D1-201ENST00000261439 EYSQ5T1H1 3165 aa8.17□□□□□ -1.1
TBC1D1-201ENST00000261439 DMXL2Q8TDJ6 3036 aa8.17□□□□□ -1.1
TBC1D1-201ENST00000261439 NBEAQ8NFP9 2946 aa8.17□□□□□ -1.1
TBC1D1-201ENST00000261439 LAMA1P25391 3075 aa8.16□□□□□ -1.1
TBC1D1-201ENST00000261439 A8MUU9 505 aa8.16□□□□□ -1.1
TBC1D1-201ENST00000261439 ASH1LQ9NR48 2969 aaKnown RBP8.15□□□□□ -1.1
TBC1D1-201ENST00000261439 VCANP13611 3396 aa8.14□□□□□ -1.11
TBC1D1-201ENST00000261439 IGSF10Q6WRI0 2623 aa8.13□□□□□ -1.11
TBC1D1-201ENST00000261439 TACC2O95359 2948 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms