RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 PKIGQ9Y2B9 76 aa13.47□□□□□ -0.25
CLN6-201ENST00000249806 IGKV4-1P06312 121 aa13.45□□□□□ -0.26
CLN6-201ENST00000249806 IGFL1Q6UW32 110 aa13.45□□□□□ -0.26
CLN6-201ENST00000249806 H0Y9J4 135 aa13.44□□□□□ -0.26
CLN6-201ENST00000249806 UBE2AP49459 152 aa13.43□□□□□ -0.26
CLN6-201ENST00000249806 Q6ZR54 194 aa13.43□□□□□ -0.26
CLN6-201ENST00000249806 BCE1O60756 84 aa13.42□□□□□ -0.26
CLN6-201ENST00000249806 SPACA4Q8TDM5 124 aa13.42□□□□□ -0.26
CLN6-201ENST00000249806 TRAV7A0A075B6U4 112 aa13.41□□□□□ -0.26
CLN6-201ENST00000249806 C20orf197Q8N268 126 aa13.39□□□□□ -0.27
CLN6-201ENST00000249806 IGLV8-61A0A075B6I0 122 aa13.38□□□□□ -0.27
CLN6-201ENST00000249806 FBN3Q75N90 2809 aa13.38□□□□□ -0.27
CLN6-201ENST00000249806 RTL8CO15255 209 aa13.37□□□□□ -0.27
CLN6-201ENST00000249806 SMIM20Q8N5G0 67 aa13.36□□□□□ -0.27
CLN6-201ENST00000249806 KRTAP13-1Q8IUC0 172 aa13.35□□□□□ -0.27
CLN6-201ENST00000249806 DNAH17Q9UFH2 4485 aa13.35□□□□□ -0.27
CLN6-201ENST00000249806 SPRR1BP22528 89 aa13.34□□□□□ -0.27
CLN6-201ENST00000249806 DSCR10P59022 87 aa13.32□□□□□ -0.28
CLN6-201ENST00000249806 A0A087WSZ3 146 aa13.31□□□□□ -0.28
CLN6-201ENST00000249806 LY6G6CO95867 125 aa13.31□□□□□ -0.28
CLN6-201ENST00000249806 C1orf134Q5TEV5 83 aa13.3□□□□□ -0.28
CLN6-201ENST00000249806 DEFB116Q30KQ4 102 aa13.29□□□□□ -0.28
CLN6-201ENST00000249806 FRAS1Q86XX4 4008 aa13.29□□□□□ -0.28
CLN6-201ENST00000249806 DNAH8Q96JB1 4490 aa13.27□□□□□ -0.28
CLN6-201ENST00000249806 K7EQZ3 153 aa13.27□□□□□ -0.28
CLN6-201ENST00000249806 SNURFQ9Y675 71 aa13.27□□□□□ -0.29
CLN6-201ENST00000249806 TMEM258P61165 79 aa13.26□□□□□ -0.29
CLN6-201ENST00000249806 IGLV5-52A0A0A0MRZ9 124 aa13.25□□□□□ -0.29
CLN6-201ENST00000249806 OCR1Q9BZK8 76 aa13.24□□□□□ -0.29
CLN6-201ENST00000249806 PSORS1C2Q9UIG4 136 aa13.23□□□□□ -0.29
CLN6-201ENST00000249806 KLKP1Q107X0 134 aa13.22□□□□□ -0.29
CLN6-201ENST00000249806 PLAC8Q9NZF1 115 aa13.21□□□□□ -0.29
CLN6-201ENST00000249806 DNAH6Q9C0G6 4158 aa13.21□□□□□ -0.3
CLN6-201ENST00000249806 H7BZZ5 65 aa13.19□□□□□ -0.3
CLN6-201ENST00000249806 IGLV9-49A0A0B4J1Y8 123 aa13.17□□□□□ -0.3
CLN6-201ENST00000249806 RPL37AP61513 92 aaKnown RBP13.16□□□□□ -0.3
CLN6-201ENST00000249806 FAM30AQ9NZY2 134 aa13.16□□□□□ -0.3
CLN6-201ENST00000249806 SVIPQ8NHG7 77 aa13.16□□□□□ -0.3
CLN6-201ENST00000249806 TMEM254Q8TBM7 123 aa13.15□□□□□ -0.31
CLN6-201ENST00000249806 DNAH5Q8TE73 4624 aa13.12□□□□□ -0.31
CLN6-201ENST00000249806 HCG22E2RYF7 251 aa13.11□□□□□ -0.31
CLN6-201ENST00000249806 LINC00483Q53H64 154 aa13.11□□□□□ -0.31
CLN6-201ENST00000249806 ANAPC11Q9NYG5 84 aa13.1□□□□□ -0.31
CLN6-201ENST00000249806 ZNF861PO60384 105 aa13.09□□□□□ -0.31
CLN6-201ENST00000249806 LINC00472Q9H8W2 130 aa13.09□□□□□ -0.31
CLN6-201ENST00000249806 DNAH11Q96DT5 4516 aa13.09□□□□□ -0.31
CLN6-201ENST00000249806 J3KT08 172 aa13.09□□□□□ -0.31
CLN6-201ENST00000249806 KRTAP10-2P60368 255 aa13.09□□□□□ -0.31
CLN6-201ENST00000249806 WWC2-AS2Q96NR7 200 aa13.09□□□□□ -0.31
CLN6-201ENST00000249806 HYDINQ4G0P3 5121 aa13.07□□□□□ -0.32
CLN6-201ENST00000249806 RPS28P62857 69 aaKnown RBP13.07□□□□□ -0.32
CLN6-201ENST00000249806 WFDC13Q8IUB5 93 aa13.06□□□□□ -0.32
CLN6-201ENST00000249806 FAM236DA0A1B0GTK5 79 aa13.05□□□□□ -0.32
CLN6-201ENST00000249806 FAM236CP0DP71 79 aa13.05□□□□□ -0.32
CLN6-201ENST00000249806 ZNF706Q9Y5V0 76 aaPredicted RBP13.05□□□□□ -0.32
CLN6-201ENST00000249806 A0A0U1RQV1 116 aa13.05□□□□□ -0.32
CLN6-201ENST00000249806 HRCT1Q6UXD1 115 aa13.05□□□□□ -0.32
CLN6-201ENST00000249806 ALMS1Q8TCU4 4167 aa13.03□□□□□ -0.32
CLN6-201ENST00000249806 OXTP01178 125 aa13.03□□□□□ -0.32
CLN6-201ENST00000249806 NDUFC1O43677 76 aa13.01□□□□□ -0.33
CLN6-201ENST00000249806 MOBPQ13875 183 aa13.01□□□□□ -0.33
CLN6-201ENST00000249806 PRR15Q8IV56 129 aa13.01□□□□□ -0.33
CLN6-201ENST00000249806 PKD1P98161 4303 aa13□□□□□ -0.33
CLN6-201ENST00000249806 A8MWP4 228 aa13□□□□□ -0.33
CLN6-201ENST00000249806 CIRBP-AS1Q8TBR5 109 aa13□□□□□ -0.33
CLN6-201ENST00000249806 IGLV7-43P04211 117 aa12.99□□□□□ -0.33
CLN6-201ENST00000249806 FAT2Q9NYQ8 4349 aa12.99□□□□□ -0.33
CLN6-201ENST00000249806 LCE6AA0A183 80 aa12.98□□□□□ -0.33
CLN6-201ENST00000249806 KRTAP21-3Q3LHN1 58 aa12.97□□□□□ -0.33
CLN6-201ENST00000249806 KRTAP29-1A8MX34 341 aaPredicted RBP12.96□□□□□ -0.33
CLN6-201ENST00000249806 Q96NJ1 140 aa12.95□□□□□ -0.34
CLN6-201ENST00000249806 CASC2Q6XLA1 102 aa12.93□□□□□ -0.34
CLN6-201ENST00000249806 KRTAP10-1P60331 282 aa12.9□□□□□ -0.34
CLN6-201ENST00000249806 C5orf47Q569G3 176 aa12.89□□□□□ -0.35
CLN6-201ENST00000249806 LRP1BQ9NZR2 4599 aa12.89□□□□□ -0.35
CLN6-201ENST00000249806 NDUFB1O75438 58 aa12.86□□□□□ -0.35
CLN6-201ENST00000249806 SERP1Q9Y6X1 66 aa12.86□□□□□ -0.35
CLN6-201ENST00000249806 Q6ZSA8 131 aa12.85□□□□□ -0.35
CLN6-201ENST00000249806 ZCCHC13Q8WW36 166 aaKnown RBP12.85□□□□□ -0.35
CLN6-201ENST00000249806 MMP24-AS1A0A0U1RRL7 71 aa12.85□□□□□ -0.35
CLN6-201ENST00000249806 ATP5EP56381 51 aaPredicted RBP12.8□□□□□ -0.36
CLN6-201ENST00000249806 hDV103S1A0JD37 113 aa12.79□□□□□ -0.36
CLN6-201ENST00000249806 MP68P56378 58 aa12.76□□□□□ -0.37
CLN6-201ENST00000249806 VPS13BQ7Z7G8 4022 aa12.76□□□□□ -0.37
CLN6-201ENST00000249806 IGHV6-1A0A0B4J1U7 121 aa12.76□□□□□ -0.37
CLN6-201ENST00000249806 LINC00208Q96KT6 92 aa12.76□□□□□ -0.37
CLN6-201ENST00000249806 C8orf17Q9NRJ1 99 aa12.74□□□□□ -0.37
CLN6-201ENST00000249806 SACSQ9NZJ4 4579 aa12.73□□□□□ -0.37
CLN6-201ENST00000249806 H0Y9P7 68 aa12.73□□□□□ -0.37
CLN6-201ENST00000249806 A0A1B0GVX0 72 aa12.73□□□□□ -0.37
CLN6-201ENST00000249806 PKHD1P08F94 4074 aa12.72□□□□□ -0.37
CLN6-201ENST00000249806 A0A087X002 238 aa12.72□□□□□ -0.37
CLN6-201ENST00000249806 ASB16-AS1Q495Z4 193 aa12.72□□□□□ -0.37
CLN6-201ENST00000249806 CDK2AP2O75956 126 aa12.71□□□□□ -0.37
CLN6-201ENST00000249806 Q5XG85 94 aa12.71□□□□□ -0.37
CLN6-201ENST00000249806 SPINK6Q6UWN8 80 aa12.71□□□□□ -0.37
CLN6-201ENST00000249806 SSBP3-AS1Q7Z2R9 100 aa12.7□□□□□ -0.38
CLN6-201ENST00000249806 NOTCH2NLQ7Z3S9 236 aa12.7□□□□□ -0.38
CLN6-201ENST00000249806 TRAV22A0A0B4J277 110 aa12.67□□□□□ -0.38
CLN6-201ENST00000249806 KRTAP13-2Q52LG2 175 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms