RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 A0A0D9SG42 100 aa11.46□□□□□ -0.58
CLIP2-201ENST00000223398 CD164Q04900 197 aa11.41□□□□□ -0.58
CLIP2-201ENST00000223398 SPINT4Q6UDR6 99 aa11.4□□□□□ -0.58
CLIP2-201ENST00000223398 MIR22HGQ0VDD5 57 aa11.4□□□□□ -0.58
CLIP2-201ENST00000223398 LCE6AA0A183 80 aa11.39□□□□□ -0.59
CLIP2-201ENST00000223398 KLKP1Q107X0 134 aa11.39□□□□□ -0.59
CLIP2-201ENST00000223398 Q8NDZ9 215 aa11.38□□□□□ -0.59
CLIP2-201ENST00000223398 Q5VSD8 79 aa11.38□□□□□ -0.59
CLIP2-201ENST00000223398 CDH23Q9H251 3354 aa11.38□□□□□ -0.59
CLIP2-201ENST00000223398 FAM229BQ4G0N7 80 aa11.37□□□□□ -0.59
CLIP2-201ENST00000223398 GCN1Q92616 2671 aaKnown RBP11.35□□□□□ -0.59
CLIP2-201ENST00000223398 NBEAL1Q6ZS30 2694 aa11.35□□□□□ -0.59
CLIP2-201ENST00000223398 KRTAP10-2P60368 255 aa11.35□□□□□ -0.59
CLIP2-201ENST00000223398 KRTAP10-1P60331 282 aa11.34□□□□□ -0.59
CLIP2-201ENST00000223398 H7BZZ5 65 aa11.32□□□□□ -0.6
CLIP2-201ENST00000223398 CRIPTQ9P021 101 aa11.31□□□□□ -0.6
CLIP2-201ENST00000223398 CYP4F30PQ9H0H9 118 aa11.3□□□□□ -0.6
CLIP2-201ENST00000223398 UBR5O95071 2799 aaPredicted RBP11.29□□□□□ -0.6
CLIP2-201ENST00000223398 VPS13AQ96RL7 3174 aa11.28□□□□□ -0.6
CLIP2-201ENST00000223398 FRYQ5TBA9 3013 aa11.25□□□□□ -0.61
CLIP2-201ENST00000223398 SPRR1AP35321 89 aa11.23□□□□□ -0.61
CLIP2-201ENST00000223398 NBEAL2Q6ZNJ1 2754 aa11.2□□□□□ -0.62
CLIP2-201ENST00000223398 HRES1P13985 223 aa11.2□□□□□ -0.62
CLIP2-201ENST00000223398 KRTAP26-1Q6PEX3 210 aa11.19□□□□□ -0.62
CLIP2-201ENST00000223398 ZCCHC13Q8WW36 166 aaKnown RBP11.19□□□□□ -0.62
CLIP2-201ENST00000223398 SPANXA2-OT1Q8N9U9 137 aa11.18□□□□□ -0.62
CLIP2-201ENST00000223398 OCR1Q9BZK8 76 aa11.17□□□□□ -0.62
CLIP2-201ENST00000223398 MMP24-AS1A0A0U1RRL7 71 aa11.15□□□□□ -0.62
CLIP2-201ENST00000223398 CELSR3Q9NYQ7 3312 aa11.15□□□□□ -0.62
CLIP2-201ENST00000223398 Q8N9P0 234 aaPredicted RBP11.14□□□□□ -0.63
CLIP2-201ENST00000223398 PANO1I0J062 215 aa11.13□□□□□ -0.63
CLIP2-201ENST00000223398 CAMK2N1Q7Z7J9 78 aa11.13□□□□□ -0.63
CLIP2-201ENST00000223398 SZT2Q5T011 3432 aa11.12□□□□□ -0.63
CLIP2-201ENST00000223398 ITPR2Q14571 2701 aa11.1□□□□□ -0.63
CLIP2-201ENST00000223398 CDC42SE1Q9NRR8 79 aa11.1□□□□□ -0.63
CLIP2-201ENST00000223398 REV3LO60673 3130 aa11.09□□□□□ -0.63
CLIP2-201ENST00000223398 SPRR1BP22528 89 aa11.08□□□□□ -0.64
CLIP2-201ENST00000223398 SEC61BP60468 96 aaKnown RBP11.07□□□□□ -0.64
CLIP2-201ENST00000223398 TACC2O95359 2948 aa11.06□□□□□ -0.64
CLIP2-201ENST00000223398 SPINK7P58062 85 aa11.06□□□□□ -0.64
CLIP2-201ENST00000223398 CSAG1Q6PB30 78 aa11.06□□□□□ -0.64
CLIP2-201ENST00000223398 ITPR1Q14643 2758 aa11.06□□□□□ -0.64
CLIP2-201ENST00000223398 S4R3F8 94 aa11.06□□□□□ -0.64
CLIP2-201ENST00000223398 NSD1Q96L73 2696 aaPredicted RBP11.06□□□□□ -0.64
CLIP2-201ENST00000223398 Q6ZR54 194 aa11.05□□□□□ -0.64
CLIP2-201ENST00000223398 LINC00472Q9H8W2 130 aa11.03□□□□□ -0.64
CLIP2-201ENST00000223398 Q5W150 140 aa11.02□□□□□ -0.65
CLIP2-201ENST00000223398 ATMQ13315 3056 aa11.02□□□□□ -0.65
CLIP2-201ENST00000223398 A0A1B0GU33 70 aa11.01□□□□□ -0.65
CLIP2-201ENST00000223398 FLNCQ14315 2725 aa11.01□□□□□ -0.65
CLIP2-201ENST00000223398 STAB2Q8WWQ8 2551 aa11.01□□□□□ -0.65
CLIP2-201ENST00000223398 FRYLO94915 3013 aa11□□□□□ -0.65
CLIP2-201ENST00000223398 FLG2Q5D862 2391 aaPredicted RBP10.99□□□□□ -0.65
CLIP2-201ENST00000223398 FREM2Q5SZK8 3169 aa10.97□□□□□ -0.65
CLIP2-201ENST00000223398 COL12A1Q99715 3063 aa10.96□□□□□ -0.65
CLIP2-201ENST00000223398 VCANP13611 3396 aa10.93□□□□□ -0.66
CLIP2-201ENST00000223398 LAMA1P25391 3075 aa10.92□□□□□ -0.66
CLIP2-201ENST00000223398 A0A087X002 238 aa10.92□□□□□ -0.66
CLIP2-201ENST00000223398 LINC00483Q53H64 154 aa10.88□□□□□ -0.67
CLIP2-201ENST00000223398 DMXL2Q8TDJ6 3036 aa10.88□□□□□ -0.67
CLIP2-201ENST00000223398 R4GN34 69 aa10.87□□□□□ -0.67
CLIP2-201ENST00000223398 BOD1L1Q8NFC6 3051 aa10.86□□□□□ -0.67
CLIP2-201ENST00000223398 COL6A3P12111 3177 aa10.85□□□□□ -0.67
CLIP2-201ENST00000223398 KALRNO60229 2985 aa10.84□□□□□ -0.67
CLIP2-201ENST00000223398 CRYBG3Q68DQ2 2970 aa10.84□□□□□ -0.67
CLIP2-201ENST00000223398 HIVEP1P15822 2718 aa10.84□□□□□ -0.67
CLIP2-201ENST00000223398 DNAH14Q0VDD8 3507 aa10.82□□□□□ -0.68
CLIP2-201ENST00000223398 DMBT1Q9UGM3 2413 aaPredicted RBP10.81□□□□□ -0.68
CLIP2-201ENST00000223398 UTP20O75691 2785 aaKnown RBP10.81□□□□□ -0.68
CLIP2-201ENST00000223398 KRTAP4-16G5E9R7 235 aaPredicted RBP10.8□□□□□ -0.68
CLIP2-201ENST00000223398 Q1T7F1 81 aa10.8□□□□□ -0.68
CLIP2-201ENST00000223398 OXTP01178 125 aa10.8□□□□□ -0.68
CLIP2-201ENST00000223398 FP248Q71RG6 208 aaPredicted RBP10.79□□□□□ -0.68
CLIP2-201ENST00000223398 Q6ZRN7 208 aaPredicted RBP10.79□□□□□ -0.68
CLIP2-201ENST00000223398 KRTAP11-1Q8IUC1 163 aa10.78□□□□□ -0.68
CLIP2-201ENST00000223398 KTN1-AS1Q86SY8 53 aa10.76□□□□□ -0.69
CLIP2-201ENST00000223398 LRBAP50851 2863 aa10.76□□□□□ -0.69
CLIP2-201ENST00000223398 TENM4Q6N022 2769 aa10.75□□□□□ -0.69
CLIP2-201ENST00000223398 DMAC1Q96GE9 116 aa10.74□□□□□ -0.69
CLIP2-201ENST00000223398 ADGRG4Q8IZF6 3080 aa10.73□□□□□ -0.69
CLIP2-201ENST00000223398 CYSTM1Q9H1C7 97 aa10.71□□□□□ -0.69
CLIP2-201ENST00000223398 LCA10Q71F78 164 aa10.69□□□□□ -0.7
CLIP2-201ENST00000223398 LINC01558Q9Y6Z2 57 aa10.69□□□□□ -0.7
CLIP2-201ENST00000223398 M0QZ58 72 aa10.68□□□□□ -0.7
CLIP2-201ENST00000223398 KMT2BQ9UMN6 2715 aaPredicted RBP10.67□□□□□ -0.7
CLIP2-201ENST00000223398 Q75L30 129 aa10.67□□□□□ -0.7
CLIP2-201ENST00000223398 CFAP47Q6ZTR5 3102 aa10.66□□□□□ -0.7
CLIP2-201ENST00000223398 EYSQ5T1H1 3165 aa10.66□□□□□ -0.7
CLIP2-201ENST00000223398 NOTCH2NLQ7Z3S9 236 aa10.65□□□□□ -0.71
CLIP2-201ENST00000223398 ASH1LQ9NR48 2969 aaKnown RBP10.64□□□□□ -0.71
CLIP2-201ENST00000223398 LUZP6Q538Z0 58 aa10.64□□□□□ -0.71
CLIP2-201ENST00000223398 KRTAP21-3Q3LHN1 58 aa10.63□□□□□ -0.71
CLIP2-201ENST00000223398 TNRC18O15417 2968 aaPredicted RBP10.61□□□□□ -0.71
CLIP2-201ENST00000223398 KRTAP7-1Q8IUC3 87 aa10.6□□□□□ -0.71
CLIP2-201ENST00000223398 NBEAQ8NFP9 2946 aa10.6□□□□□ -0.71
CLIP2-201ENST00000223398 ZZEF1O43149 2961 aa10.6□□□□□ -0.71
CLIP2-201ENST00000223398 APCP25054 2843 aa10.59□□□□□ -0.71
CLIP2-201ENST00000223398 ADM2Q7Z4H4 148 aa10.58□□□□□ -0.72
CLIP2-201ENST00000223398 KRTAP13-2Q52LG2 175 aa10.54□□□□□ -0.72
CLIP2-201ENST00000223398 CELSR2Q9HCU4 2923 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms