RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 CASC10Q5T4H9 136 aa9.21□□□□□ -0.93
SPTLC2-201ENST00000216484 PLAC4Q8WY50 150 aa9.21□□□□□ -0.94
SPTLC2-201ENST00000216484 C19orf73Q9NVV2 129 aa9.19□□□□□ -0.94
SPTLC2-201ENST00000216484 COL6A5A8TX70 2615 aa9.18□□□□□ -0.94
SPTLC2-201ENST00000216484 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.18□□□□□ -0.94
SPTLC2-201ENST00000216484 STAB2Q8WWQ8 2551 aa9.18□□□□□ -0.94
SPTLC2-201ENST00000216484 BAHCC1Q9P281 2608 aa9.18□□□□□ -0.94
SPTLC2-201ENST00000216484 TEX15Q9BXT5 2789 aa9.17□□□□□ -0.94
SPTLC2-201ENST00000216484 KRTAP16-1A8MUX0 517 aa9.17□□□□□ -0.94
SPTLC2-201ENST00000216484 ZCCHC13Q8WW36 166 aaKnown RBP9.16□□□□□ -0.94
SPTLC2-201ENST00000216484 Q5VV11 94 aa9.14□□□□□ -0.95
SPTLC2-201ENST00000216484 RPL37P61927 97 aaKnown RBP9.11□□□□□ -0.95
SPTLC2-201ENST00000216484 CELSR3Q9NYQ7 3312 aa9.11□□□□□ -0.95
SPTLC2-201ENST00000216484 NOTCH1P46531 2555 aa9.11□□□□□ -0.95
SPTLC2-201ENST00000216484 Q5XG85 94 aa9.1□□□□□ -0.95
SPTLC2-201ENST00000216484 RANBP2P49792 3224 aaKnown RBP9.09□□□□□ -0.95
SPTLC2-201ENST00000216484 M0QZ58 72 aa9.09□□□□□ -0.95
SPTLC2-201ENST00000216484 UNC79Q9P2D8 2635 aa9.08□□□□□ -0.96
SPTLC2-201ENST00000216484 TNP2Q05952 138 aa9.06□□□□□ -0.96
SPTLC2-201ENST00000216484 FLNBO75369 2602 aaKnown RBP9.05□□□□□ -0.96
SPTLC2-201ENST00000216484 Q5W150 140 aa9.05□□□□□ -0.96
SPTLC2-201ENST00000216484 FP248Q71RG6 208 aaPredicted RBP9.05□□□□□ -0.96
SPTLC2-201ENST00000216484 KRTAP10-3P60369 221 aa9.01□□□□□ -0.97
SPTLC2-201ENST00000216484 C20orf166-AS1Q96NR2 134 aa9□□□□□ -0.97
SPTLC2-201ENST00000216484 MMP24-AS1A0A0U1RRL7 71 aa9□□□□□ -0.97
SPTLC2-201ENST00000216484 VPS13AQ96RL7 3174 aa8.99□□□□□ -0.97
SPTLC2-201ENST00000216484 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
SPTLC2-201ENST00000216484 SEC61BP60468 96 aaKnown RBP8.98□□□□□ -0.97
SPTLC2-201ENST00000216484 TRIOO75962 3097 aa8.97□□□□□ -0.97
SPTLC2-201ENST00000216484 GCN1Q92616 2671 aaKnown RBP8.96□□□□□ -0.98
SPTLC2-201ENST00000216484 KLK9Q2XQG4 91 aa8.96□□□□□ -0.98
SPTLC2-201ENST00000216484 SPATA8Q6RVD6 105 aa8.95□□□□□ -0.98
SPTLC2-201ENST00000216484 CYSTM1Q9H1C7 97 aa8.95□□□□□ -0.98
SPTLC2-201ENST00000216484 DSPP15924 2871 aaKnown RBP8.95□□□□□ -0.98
SPTLC2-201ENST00000216484 C10orf142B7Z368 130 aa8.94□□□□□ -0.98
SPTLC2-201ENST00000216484 APCP25054 2843 aa8.94□□□□□ -0.98
SPTLC2-201ENST00000216484 MKI67P46013 3256 aaKnown RBP8.93□□□□□ -0.98
SPTLC2-201ENST00000216484 HELZ2Q9BYK8 2649 aaKnown RBP8.92□□□□□ -0.98
SPTLC2-201ENST00000216484 Q8NDZ9 215 aa8.91□□□□□ -0.98
SPTLC2-201ENST00000216484 UNC80Q8N2C7 3258 aa8.91□□□□□ -0.98
SPTLC2-201ENST00000216484 NSD1Q96L73 2696 aaPredicted RBP8.89□□□□□ -0.99
SPTLC2-201ENST00000216484 Q5VSD8 79 aa8.88□□□□□ -0.99
SPTLC2-201ENST00000216484 MAP1AP78559 2803 aaPredicted RBP8.87□□□□□ -0.99
SPTLC2-201ENST00000216484 A0A096LNT2 108 aa8.86□□□□□ -0.99
SPTLC2-201ENST00000216484 DNAH14Q0VDD8 3507 aa8.84□□□□□ -0.99
SPTLC2-201ENST00000216484 KMT2BQ9UMN6 2715 aaPredicted RBP8.84□□□□□ -0.99
SPTLC2-201ENST00000216484 TEP1Q99973 2627 aaKnown RBP8.84□□□□□ -0.99
SPTLC2-201ENST00000216484 LINC00472Q9H8W2 130 aa8.82□□□□□ -1
SPTLC2-201ENST00000216484 PLAC8Q9NZF1 115 aa8.81□□□□□ -1
SPTLC2-201ENST00000216484 WDFY4Q6ZS81 3184 aa8.79□□□□□ -1
SPTLC2-201ENST00000216484 NDUFAF8A1L188 74 aa8.78□□□□□ -1
SPTLC2-201ENST00000216484 BRCA2P51587 3418 aa8.77□□□□□ -1
SPTLC2-201ENST00000216484 TRANK1O15050 2925 aa8.77□□□□□ -1.01
SPTLC2-201ENST00000216484 ASB16-AS1Q495Z4 193 aa8.77□□□□□ -1.01
SPTLC2-201ENST00000216484 UTP20O75691 2785 aaKnown RBP8.75□□□□□ -1.01
SPTLC2-201ENST00000216484 FRYQ5TBA9 3013 aa8.74□□□□□ -1.01
SPTLC2-201ENST00000216484 ITPR2Q14571 2701 aa8.74□□□□□ -1.01
SPTLC2-201ENST00000216484 KRTAP25-1Q3LHN0 102 aa8.72□□□□□ -1.01
SPTLC2-201ENST00000216484 ASH1LQ9NR48 2969 aaKnown RBP8.71□□□□□ -1.01
SPTLC2-201ENST00000216484 PANO1I0J062 215 aa8.71□□□□□ -1.02
SPTLC2-201ENST00000216484 NBEAL2Q6ZNJ1 2754 aa8.7□□□□□ -1.02
SPTLC2-201ENST00000216484 KRTAP26-1Q6PEX3 210 aa8.7□□□□□ -1.02
SPTLC2-201ENST00000216484 MGAQ8IWI9 3026 aa8.69□□□□□ -1.02
SPTLC2-201ENST00000216484 KALRNO60229 2985 aa8.69□□□□□ -1.02
SPTLC2-201ENST00000216484 OXTP01178 125 aa8.68□□□□□ -1.02
SPTLC2-201ENST00000216484 HTTP42858 3142 aa8.68□□□□□ -1.02
SPTLC2-201ENST00000216484 Q6ZR54 194 aa8.67□□□□□ -1.02
SPTLC2-201ENST00000216484 SPRR1AP35321 89 aa8.66□□□□□ -1.02
SPTLC2-201ENST00000216484 C10orf95Q9H7T3 257 aa8.66□□□□□ -1.02
SPTLC2-201ENST00000216484 CDH23Q9H251 3354 aa8.65□□□□□ -1.02
SPTLC2-201ENST00000216484 CRYBG3Q68DQ2 2970 aa8.65□□□□□ -1.02
SPTLC2-201ENST00000216484 A8MUU9 505 aa8.63□□□□□ -1.03
SPTLC2-201ENST00000216484 IGSF10Q6WRI0 2623 aa8.62□□□□□ -1.03
SPTLC2-201ENST00000216484 PRUNE2Q8WUY3 3088 aa8.61□□□□□ -1.03
SPTLC2-201ENST00000216484 COL12A1Q99715 3063 aa8.61□□□□□ -1.03
SPTLC2-201ENST00000216484 LAMA3Q16787 3333 aa8.61□□□□□ -1.03
SPTLC2-201ENST00000216484 SETXQ7Z333 2677 aaKnown RBP8.61□□□□□ -1.03
SPTLC2-201ENST00000216484 UBR5O95071 2799 aaPredicted RBP8.61□□□□□ -1.03
SPTLC2-201ENST00000216484 FRYLO94915 3013 aa8.6□□□□□ -1.03
SPTLC2-201ENST00000216484 A8MU10 97 aa8.59□□□□□ -1.03
SPTLC2-201ENST00000216484 ZNF292O60281 2723 aa8.57□□□□□ -1.04
SPTLC2-201ENST00000216484 LRBAP50851 2863 aa8.56□□□□□ -1.04
SPTLC2-201ENST00000216484 ITPR1Q14643 2758 aa8.55□□□□□ -1.04
SPTLC2-201ENST00000216484 SPRR1BP22528 89 aa8.55□□□□□ -1.04
SPTLC2-201ENST00000216484 LAMA1P25391 3075 aa8.54□□□□□ -1.04
SPTLC2-201ENST00000216484 SPEGQ15772 3267 aa8.53□□□□□ -1.04
SPTLC2-201ENST00000216484 CHD7Q9P2D1 2997 aa8.51□□□□□ -1.05
SPTLC2-201ENST00000216484 DMXL2Q8TDJ6 3036 aa8.51□□□□□ -1.05
SPTLC2-201ENST00000216484 KRTAP1-3Q8IUG1 177 aa8.51□□□□□ -1.05
SPTLC2-201ENST00000216484 TNP1P09430 55 aa8.5□□□□□ -1.05
SPTLC2-201ENST00000216484 KRTAP10-1P60331 282 aa8.49□□□□□ -1.05
SPTLC2-201ENST00000216484 COL6A3P12111 3177 aa8.49□□□□□ -1.05
SPTLC2-201ENST00000216484 CFAP47Q6ZTR5 3102 aa8.47□□□□□ -1.05
SPTLC2-201ENST00000216484 A6NN06 94 aa8.47□□□□□ -1.05
SPTLC2-201ENST00000216484 KRTAP10-2P60368 255 aa8.46□□□□□ -1.06
SPTLC2-201ENST00000216484 KRTAP1-1Q07627 177 aa8.43□□□□□ -1.06
SPTLC2-201ENST00000216484 A0A087X002 238 aa8.42□□□□□ -1.06
SPTLC2-201ENST00000216484 BOD1L1Q8NFC6 3051 aa8.42□□□□□ -1.06
SPTLC2-201ENST00000216484 KRTAP1-5Q9BYS1 174 aa8.41□□□□□ -1.06
SPTLC2-201ENST00000216484 ATMQ13315 3056 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms