RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 F8WEM9 126 aa11.76□□□□□ -0.53
VTI1B-201ENST00000216456 VAMP3Q15836 100 aa11.76□□□□□ -0.53
VTI1B-201ENST00000216456 IGFL1Q6UW32 110 aa11.75□□□□□ -0.53
VTI1B-201ENST00000216456 HSBP1L1C9JCN9 74 aa11.74□□□□□ -0.53
VTI1B-201ENST00000216456 TCL1BO95988 128 aa11.74□□□□□ -0.53
VTI1B-201ENST00000216456 TRBV7-7A0A0K0K1E9 115 aa11.7□□□□□ -0.54
VTI1B-201ENST00000216456 OCIAD2Q56VL3 154 aa11.69□□□□□ -0.54
VTI1B-201ENST00000216456 CLEC2BQ92478 149 aa11.69□□□□□ -0.54
VTI1B-201ENST00000216456 FLGP20930 4061 aaPredicted RBP11.68□□□□□ -0.54
VTI1B-201ENST00000216456 HIST1H4GQ99525 98 aa11.68□□□□□ -0.54
VTI1B-201ENST00000216456 CRCT1Q9UGL9 99 aa11.68□□□□□ -0.54
VTI1B-201ENST00000216456 H3BUT2 72 aa11.67□□□□□ -0.54
VTI1B-201ENST00000216456 LORP23490 312 aaPredicted RBP11.67□□□□□ -0.54
VTI1B-201ENST00000216456 KRTAP10-6P60371 365 aaPredicted RBP11.67□□□□□ -0.54
VTI1B-201ENST00000216456 Q6JHZ5 121 aa11.67□□□□□ -0.54
VTI1B-201ENST00000216456 SCGB1D1O95968 90 aa11.66□□□□□ -0.54
VTI1B-201ENST00000216456 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.65□□□□□ -0.54
VTI1B-201ENST00000216456 S100A6P06703 90 aa11.64□□□□□ -0.55
VTI1B-201ENST00000216456 OBSCN-AS1Q96MR7 158 aa11.63□□□□□ -0.55
VTI1B-201ENST00000216456 CFC1BP0CG36 223 aa11.62□□□□□ -0.55
VTI1B-201ENST00000216456 COX8AP10176 69 aa11.62□□□□□ -0.55
VTI1B-201ENST00000216456 COX6B2Q6YFQ2 88 aa11.61□□□□□ -0.55
VTI1B-201ENST00000216456 SNHG12Q9BXW3 62 aa11.6□□□□□ -0.55
VTI1B-201ENST00000216456 M0R2T5 61 aa11.59□□□□□ -0.55
VTI1B-201ENST00000216456 CFC1P0CG37 223 aa11.59□□□□□ -0.55
VTI1B-201ENST00000216456 BVES-AS1Q5T3Y7 98 aa11.59□□□□□ -0.55
VTI1B-201ENST00000216456 C14orf144Q96I85 54 aa11.59□□□□□ -0.55
VTI1B-201ENST00000216456 FAM218AQ96MZ4 157 aa11.58□□□□□ -0.56
VTI1B-201ENST00000216456 DLEU1O43261 78 aa11.53□□□□□ -0.56
VTI1B-201ENST00000216456 S100A1P23297 94 aa11.53□□□□□ -0.56
VTI1B-201ENST00000216456 PPDPFLQ8WWR9 84 aa11.53□□□□□ -0.56
VTI1B-201ENST00000216456 LST1O00453 97 aa11.52□□□□□ -0.57
VTI1B-201ENST00000216456 PAM16Q9Y3D7 125 aa11.52□□□□□ -0.57
VTI1B-201ENST00000216456 C2orf91Q6ZV80 131 aa11.51□□□□□ -0.57
VTI1B-201ENST00000216456 Q75L30 129 aa11.51□□□□□ -0.57
VTI1B-201ENST00000216456 RAB37Q96AX2 223 aa11.51□□□□□ -0.57
VTI1B-201ENST00000216456 Q6Q795 121 aa11.49□□□□□ -0.57
VTI1B-201ENST00000216456 Q96NJ1 140 aa11.49□□□□□ -0.57
VTI1B-201ENST00000216456 SPATA45Q537H7 98 aa11.48□□□□□ -0.57
VTI1B-201ENST00000216456 ATP11AUNQ6ZP68 121 aa11.48□□□□□ -0.57
VTI1B-201ENST00000216456 NDUFV3P56181 108 aaKnown RBP11.47□□□□□ -0.57
VTI1B-201ENST00000216456 A0A0B4J2C4 111 aa11.46□□□□□ -0.57
VTI1B-201ENST00000216456 HIGD1BQ9P298 99 aa11.45□□□□□ -0.58
VTI1B-201ENST00000216456 A0A087WSZ3 146 aa11.44□□□□□ -0.58
VTI1B-201ENST00000216456 H0YGX0 51 aa11.42□□□□□ -0.58
VTI1B-201ENST00000216456 TEN1Q86WV5 123 aa11.41□□□□□ -0.58
VTI1B-201ENST00000216456 H3BMG7 143 aa11.4□□□□□ -0.58
VTI1B-201ENST00000216456 FXYD2P54710 66 aa11.4□□□□□ -0.58
VTI1B-201ENST00000216456 CEND1Q8N111 149 aa11.4□□□□□ -0.58
VTI1B-201ENST00000216456 FABP2P12104 132 aa11.39□□□□□ -0.59
VTI1B-201ENST00000216456 VAMP8Q9BV40 100 aa11.39□□□□□ -0.59
VTI1B-201ENST00000216456 SS18L2Q9UHA2 77 aa11.39□□□□□ -0.59
VTI1B-201ENST00000216456 DSCR10P59022 87 aa11.38□□□□□ -0.59
VTI1B-201ENST00000216456 C20orf166-AS1Q96NR2 134 aa11.38□□□□□ -0.59
VTI1B-201ENST00000216456 A0A1W2PNM2 257 aa11.37□□□□□ -0.59
VTI1B-201ENST00000216456 A0A1B0GV72 72 aa11.36□□□□□ -0.59
VTI1B-201ENST00000216456 A8MUU9 505 aa11.36□□□□□ -0.59
VTI1B-201ENST00000216456 TRIAP1O43715 76 aa11.36□□□□□ -0.59
VTI1B-201ENST00000216456 PRO1854Q9UHT4 67 aa11.36□□□□□ -0.59
VTI1B-201ENST00000216456 SNCGO76070 127 aa11.34□□□□□ -0.59
VTI1B-201ENST00000216456 SIGMAR1Q99720 223 aa11.3□□□□□ -0.6
VTI1B-201ENST00000216456 A0A1B0GX51 115 aa11.29□□□□□ -0.6
VTI1B-201ENST00000216456 KRTAP16-1A8MUX0 517 aa11.29□□□□□ -0.6
VTI1B-201ENST00000216456 K7ERJ3 54 aa11.29□□□□□ -0.6
VTI1B-201ENST00000216456 TMEM238LA0A1B0GVL6 79 aa11.26□□□□□ -0.61
VTI1B-201ENST00000216456 A6NJY4 79 aa11.26□□□□□ -0.61
VTI1B-201ENST00000216456 NOTCH2NLQ7Z3S9 236 aa11.26□□□□□ -0.61
VTI1B-201ENST00000216456 DEFB116Q30KQ4 102 aa11.25□□□□□ -0.61
VTI1B-201ENST00000216456 IGKV4-1P06312 121 aa11.22□□□□□ -0.61
VTI1B-201ENST00000216456 ANKRD29Q8N6D5 301 aa11.22□□□□□ -0.61
VTI1B-201ENST00000216456 KRTAP9-8Q9BYQ0 159 aa11.22□□□□□ -0.61
VTI1B-201ENST00000216456 PYY3Q5JQD4 70 aa11.2□□□□□ -0.62
VTI1B-201ENST00000216456 ORMDL1Q9P0S3 153 aa11.2□□□□□ -0.62
VTI1B-201ENST00000216456 GHRHP01286 108 aa11.19□□□□□ -0.62
VTI1B-201ENST00000216456 PSMB2P49721 201 aa11.19□□□□□ -0.62
VTI1B-201ENST00000216456 LINC00313P59037 77 aa11.19□□□□□ -0.62
VTI1B-201ENST00000216456 TRBV20-1A0A075B6N2 111 aa11.17□□□□□ -0.62
VTI1B-201ENST00000216456 TRBV7-4A0A0J9YYF1 115 aa11.17□□□□□ -0.62
VTI1B-201ENST00000216456 DNAL4O96015 105 aa11.17□□□□□ -0.62
VTI1B-201ENST00000216456 HSD52Q0P140 79 aa11.17□□□□□ -0.62
VTI1B-201ENST00000216456 LINC00472Q9H8W2 130 aa11.15□□□□□ -0.62
VTI1B-201ENST00000216456 CCKP06307 115 aa11.13□□□□□ -0.63
VTI1B-201ENST00000216456 USH2AO75445 5202 aa11.12□□□□□ -0.63
VTI1B-201ENST00000216456 IGHV6-1A0A0B4J1U7 121 aa11.11□□□□□ -0.63
VTI1B-201ENST00000216456 TMEM256-PLSCR3K7ERE1 68 aa11.1□□□□□ -0.63
VTI1B-201ENST00000216456 TRACP01848 142 aa11.09□□□□□ -0.63
VTI1B-201ENST00000216456 HRES1P13985 223 aa11.09□□□□□ -0.63
VTI1B-201ENST00000216456 FAM236DA0A1B0GTK5 79 aa11.07□□□□□ -0.64
VTI1B-201ENST00000216456 FAM236CP0DP71 79 aa11.07□□□□□ -0.64
VTI1B-201ENST00000216456 VPS25Q9BRG1 176 aa11.07□□□□□ -0.64
VTI1B-201ENST00000216456 SSPOA2VEC9 5147 aa11.07□□□□□ -0.64
VTI1B-201ENST00000216456 COX6CP09669 75 aa11.06□□□□□ -0.64
VTI1B-201ENST00000216456 MT2AP02795 61 aa11.05□□□□□ -0.64
VTI1B-201ENST00000216456 MPLKIPQ8TAP9 179 aa11.05□□□□□ -0.64
VTI1B-201ENST00000216456 UBE2V1Q13404 147 aa11.04□□□□□ -0.64
VTI1B-201ENST00000216456 H3BQ85 93 aa11.03□□□□□ -0.64
VTI1B-201ENST00000216456 UQCR10Q9UDW1 63 aa11.01□□□□□ -0.65
VTI1B-201ENST00000216456 TMA7Q9Y2S6 64 aaKnown RBP11□□□□□ -0.65
VTI1B-201ENST00000216456 MT1FP04733 61 aa10.99□□□□□ -0.65
VTI1B-201ENST00000216456 SCGB1C2P0DMR2 95 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms