RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 PCOTHQ58A44 107 aa7.23□□□□□ -1.25
ACTN1-201ENST00000193403 PRR15LQ9BU68 103 aa7.22□□□□□ -1.25
ACTN1-201ENST00000193403 H0Y9P7 68 aa7.22□□□□□ -1.25
ACTN1-201ENST00000193403 KRTAP10-11P60412 298 aa7.22□□□□□ -1.25
ACTN1-201ENST00000193403 DSCR10P59022 87 aa7.22□□□□□ -1.25
ACTN1-201ENST00000193403 PMAIP1Q13794 54 aa7.22□□□□□ -1.25
ACTN1-201ENST00000193403 TGP01266 2768 aa7.22□□□□□ -1.25
ACTN1-201ENST00000193403 NDUFB1O75438 58 aa7.21□□□□□ -1.25
ACTN1-201ENST00000193403 CASC2Q6XLA1 102 aa7.21□□□□□ -1.25
ACTN1-201ENST00000193403 IGLV1-50A0A075B6I6 118 aa7.21□□□□□ -1.26
ACTN1-201ENST00000193403 hDV103S1A0JD37 113 aa7.21□□□□□ -1.26
ACTN1-201ENST00000193403 IGLV5-48A0A075B6I7 105 aa7.21□□□□□ -1.26
ACTN1-201ENST00000193403 SEC61GP60059 68 aa7.2□□□□□ -1.26
ACTN1-201ENST00000193403 LINC00588Q9Y4M8 146 aa7.2□□□□□ -1.26
ACTN1-201ENST00000193403 TRAV22A0A0B4J277 110 aa7.19□□□□□ -1.26
ACTN1-201ENST00000193403 B9D2Q9BPU9 175 aa7.19□□□□□ -1.26
ACTN1-201ENST00000193403 A6NED7 52 aa7.19□□□□□ -1.26
ACTN1-201ENST00000193403 IGFL1Q6UW32 110 aa7.19□□□□□ -1.26
ACTN1-201ENST00000193403 PHF5AQ7RTV0 110 aaKnown RBP7.18□□□□□ -1.26
ACTN1-201ENST00000193403 TENM2Q9NT68 2774 aa7.18□□□□□ -1.26
ACTN1-201ENST00000193403 KRTAP26-1Q6PEX3 210 aa7.17□□□□□ -1.26
ACTN1-201ENST00000193403 RETNLBQ9BQ08 111 aa7.16□□□□□ -1.26
ACTN1-201ENST00000193403 IGHV6-1A0A0B4J1U7 121 aa7.13□□□□□ -1.27
ACTN1-201ENST00000193403 H3BNG1 76 aa7.13□□□□□ -1.27
ACTN1-201ENST00000193403 DNAH10OSP0CZ25 163 aa7.11□□□□□ -1.27
ACTN1-201ENST00000193403 F8WDY8 70 aa7.1□□□□□ -1.27
ACTN1-201ENST00000193403 SPRR4Q96PI1 79 aa7.1□□□□□ -1.27
ACTN1-201ENST00000193403 A0A1B0GW54 56 aa7.09□□□□□ -1.27
ACTN1-201ENST00000193403 SPAG11AQ6PDA7 123 aa7.09□□□□□ -1.28
ACTN1-201ENST00000193403 ANAPC11Q9NYG5 84 aa7.09□□□□□ -1.28
ACTN1-201ENST00000193403 A8MU10 97 aa7.08□□□□□ -1.28
ACTN1-201ENST00000193403 CIRBP-AS1Q8TBR5 109 aa7.08□□□□□ -1.28
ACTN1-201ENST00000193403 TNP2Q05952 138 aa7.07□□□□□ -1.28
ACTN1-201ENST00000193403 TLX1NBP0CAT3 122 aa7.06□□□□□ -1.28
ACTN1-201ENST00000193403 Q1T7F1 81 aa7.06□□□□□ -1.28
ACTN1-201ENST00000193403 C14orf177Q52M58 125 aa7.05□□□□□ -1.28
ACTN1-201ENST00000193403 PRR15Q8IV56 129 aa7.05□□□□□ -1.28
ACTN1-201ENST00000193403 KRTAP4-16G5E9R7 235 aaPredicted RBP7.04□□□□□ -1.28
ACTN1-201ENST00000193403 LY6G6CO95867 125 aa7.04□□□□□ -1.28
ACTN1-201ENST00000193403 SPRR1AP35321 89 aa7.04□□□□□ -1.28
ACTN1-201ENST00000193403 COA5Q86WW8 74 aa7.04□□□□□ -1.28
ACTN1-201ENST00000193403 KRTAP7-1Q8IUC3 87 aa7.04□□□□□ -1.28
ACTN1-201ENST00000193403 K7EIL1 84 aa7.04□□□□□ -1.28
ACTN1-201ENST00000193403 PLA2G2DQ9UNK4 145 aa7.03□□□□□ -1.28
ACTN1-201ENST00000193403 LIMD2Q9BT23 127 aa7.03□□□□□ -1.28
ACTN1-201ENST00000193403 A8MWP4 228 aa7.02□□□□□ -1.29
ACTN1-201ENST00000193403 C16orf90A8MZG2 172 aa7.02□□□□□ -1.29
ACTN1-201ENST00000193403 MOBPQ13875 183 aa7.02□□□□□ -1.29
ACTN1-201ENST00000193403 ZCCHC13Q8WW36 166 aaKnown RBP7.02□□□□□ -1.29
ACTN1-201ENST00000193403 SRRM2Q9UQ35 2752 aaKnown RBP7.01□□□□□ -1.29
ACTN1-201ENST00000193403 CYP4F30PQ9H0H9 118 aa7□□□□□ -1.29
ACTN1-201ENST00000193403 CNBPP62633 177 aaKnown RBP7□□□□□ -1.29
ACTN1-201ENST00000193403 IGLV5-37A0A075B6J1 123 aa6.99□□□□□ -1.29
ACTN1-201ENST00000193403 Q5VV11 94 aa6.99□□□□□ -1.29
ACTN1-201ENST00000193403 KRTAP3-3Q9BYR6 98 aa6.98□□□□□ -1.29
ACTN1-201ENST00000193403 KRTAP3-2Q9BYR7 98 aa6.98□□□□□ -1.29
ACTN1-201ENST00000193403 Q8N9P0 234 aaPredicted RBP6.97□□□□□ -1.29
ACTN1-201ENST00000193403 KRTAP1-5Q9BYS1 174 aa6.94□□□□□ -1.3
ACTN1-201ENST00000193403 LCE6AA0A183 80 aa6.94□□□□□ -1.3
ACTN1-201ENST00000193403 H3BPC8 53 aa6.93□□□□□ -1.3
ACTN1-201ENST00000193403 SPINK1P00995 79 aa6.93□□□□□ -1.3
ACTN1-201ENST00000193403 KRTAP11-1Q8IUC1 163 aa6.93□□□□□ -1.3
ACTN1-201ENST00000193403 IGLV5-52A0A0A0MRZ9 124 aa6.92□□□□□ -1.3
ACTN1-201ENST00000193403 CSMD3Q7Z407 3707 aa6.92□□□□□ -1.3
ACTN1-201ENST00000193403 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
ACTN1-201ENST00000193403 SPANXA2-OT1Q8N9U9 137 aa6.91□□□□□ -1.3
ACTN1-201ENST00000193403 LOC101927531A0A1B0GV80 90 aa6.9□□□□□ -1.3
ACTN1-201ENST00000193403 KRTAP29-1A8MX34 341 aaPredicted RBP6.9□□□□□ -1.3
ACTN1-201ENST00000193403 MMP24-AS1A0A0U1RRL7 71 aa6.9□□□□□ -1.3
ACTN1-201ENST00000193403 C8orf17Q9NRJ1 99 aa6.9□□□□□ -1.3
ACTN1-201ENST00000193403 LINC00472Q9H8W2 130 aa6.89□□□□□ -1.31
ACTN1-201ENST00000193403 DMBT1Q9UGM3 2413 aaPredicted RBP6.89□□□□□ -1.31
ACTN1-201ENST00000193403 NBDYA0A0U1RRE5 68 aa6.89□□□□□ -1.31
ACTN1-201ENST00000193403 PRR26Q8N8Z3 221 aa6.89□□□□□ -1.31
ACTN1-201ENST00000193403 CD164Q04900 197 aa6.89□□□□□ -1.31
ACTN1-201ENST00000193403 IGLV8-61A0A075B6I0 122 aa6.87□□□□□ -1.31
ACTN1-201ENST00000193403 IGKV2D-30A0A075B6S6 120 aa6.87□□□□□ -1.31
ACTN1-201ENST00000193403 IGKV2-30P06310 120 aa6.87□□□□□ -1.31
ACTN1-201ENST00000193403 KTN1-AS1Q86SY8 53 aa6.87□□□□□ -1.31
ACTN1-201ENST00000193403 TP53AIP1Q9HCN2 124 aa6.86□□□□□ -1.31
ACTN1-201ENST00000193403 LCA10Q71F78 164 aa6.85□□□□□ -1.31
ACTN1-201ENST00000193403 SPACA4Q8TDM5 124 aa6.85□□□□□ -1.31
ACTN1-201ENST00000193403 PANO1I0J062 215 aa6.85□□□□□ -1.31
ACTN1-201ENST00000193403 ATP11AUNQ6ZP68 121 aa6.85□□□□□ -1.31
ACTN1-201ENST00000193403 MRPL34Q9BQ48 92 aaKnown RBP6.85□□□□□ -1.31
ACTN1-201ENST00000193403 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.31
ACTN1-201ENST00000193403 RTL8CO15255 209 aa6.84□□□□□ -1.31
ACTN1-201ENST00000193403 DNHD1Q96M86 4753 aa6.84□□□□□ -1.31
ACTN1-201ENST00000193403 NUPR2A6NF83 97 aa6.84□□□□□ -1.31
ACTN1-201ENST00000193403 ZNF706Q9Y5V0 76 aaPredicted RBP6.84□□□□□ -1.32
ACTN1-201ENST00000193403 C9orf163Q8N9P6 203 aa6.83□□□□□ -1.32
ACTN1-201ENST00000193403 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.83□□□□□ -1.32
ACTN1-201ENST00000193403 A0A1B0GVX0 72 aa6.83□□□□□ -1.32
ACTN1-201ENST00000193403 SPINK7P58062 85 aa6.83□□□□□ -1.32
ACTN1-201ENST00000193403 RBM12B-AS1Q9P1G2 102 aa6.83□□□□□ -1.32
ACTN1-201ENST00000193403 COL7A1Q02388 2944 aa6.83□□□□□ -1.32
ACTN1-201ENST00000193403 Q75L30 129 aa6.81□□□□□ -1.32
ACTN1-201ENST00000193403 C1orf134Q5TEV5 83 aa6.81□□□□□ -1.32
ACTN1-201ENST00000193403 ANK2Q01484 3957 aa6.81□□□□□ -1.32
ACTN1-201ENST00000193403 HRES1P13985 223 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms