RNA–Protein interactions for RNA: ENST00000181839.8

CDK13-201, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK13, Length 7,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-201ENST00000181839 SPATA8Q6RVD6 105 aa10.79□□□□□ -0.68
CDK13-201ENST00000181839 ROMO1P60602 79 aa10.74□□□□□ -0.69
CDK13-201ENST00000181839 Q75L30 129 aa10.73□□□□□ -0.69
CDK13-201ENST00000181839 KRTAP1-5Q9BYS1 174 aa10.72□□□□□ -0.69
CDK13-201ENST00000181839 RPL37P61927 97 aaKnown RBP10.71□□□□□ -0.69
CDK13-201ENST00000181839 HECTD1Q9ULT8 2610 aa10.71□□□□□ -0.7
CDK13-201ENST00000181839 C20orf166-AS1Q96NR2 134 aa10.7□□□□□ -0.7
CDK13-201ENST00000181839 XIRP2A4UGR9 3374 aa10.7□□□□□ -0.7
CDK13-201ENST00000181839 EPG5Q9HCE0 2579 aa10.68□□□□□ -0.7
CDK13-201ENST00000181839 FP248Q71RG6 208 aaPredicted RBP10.67□□□□□ -0.7
CDK13-201ENST00000181839 H3BS24 57 aa10.64□□□□□ -0.71
CDK13-201ENST00000181839 Q8NDZ9 215 aa10.64□□□□□ -0.71
CDK13-201ENST00000181839 CFAP46Q8IYW2 2715 aa10.62□□□□□ -0.71
CDK13-201ENST00000181839 LINC01558Q9Y6Z2 57 aa10.59□□□□□ -0.71
CDK13-201ENST00000181839 Q6ZR54 194 aa10.56□□□□□ -0.72
CDK13-201ENST00000181839 ITPR3Q14573 2671 aa10.54□□□□□ -0.72
CDK13-201ENST00000181839 LINC00472Q9H8W2 130 aa10.54□□□□□ -0.72
CDK13-201ENST00000181839 CFAP54Q96N23 3096 aa10.54□□□□□ -0.72
CDK13-201ENST00000181839 KRTAP26-1Q6PEX3 210 aa10.53□□□□□ -0.72
CDK13-201ENST00000181839 A0A087X002 238 aa10.53□□□□□ -0.72
CDK13-201ENST00000181839 FLNBO75369 2602 aaKnown RBP10.53□□□□□ -0.72
CDK13-201ENST00000181839 FLNAP21333 2647 aaKnown RBP10.51□□□□□ -0.73
CDK13-201ENST00000181839 A8MUU9 505 aa10.51□□□□□ -0.73
CDK13-201ENST00000181839 PANO1I0J062 215 aa10.5□□□□□ -0.73
CDK13-201ENST00000181839 MKI67P46013 3256 aaKnown RBP10.49□□□□□ -0.73
CDK13-201ENST00000181839 Q5VV11 94 aa10.48□□□□□ -0.73
CDK13-201ENST00000181839 ATRQ13535 2644 aa10.48□□□□□ -0.73
CDK13-201ENST00000181839 SPRR1AP35321 89 aa10.45□□□□□ -0.74
CDK13-201ENST00000181839 SPRR1BP22528 89 aa10.43□□□□□ -0.74
CDK13-201ENST00000181839 A0A0C4DFX4 3053 aa10.42□□□□□ -0.74
CDK13-201ENST00000181839 CELSR3Q9NYQ7 3312 aa10.42□□□□□ -0.74
CDK13-201ENST00000181839 MAST4O15021 2626 aa10.4□□□□□ -0.74
CDK13-201ENST00000181839 A0A1B0GVY2 172 aa10.36□□□□□ -0.75
CDK13-201ENST00000181839 AKAP13Q12802 2813 aa10.36□□□□□ -0.75
CDK13-201ENST00000181839 HELZ2Q9BYK8 2649 aaKnown RBP10.35□□□□□ -0.75
CDK13-201ENST00000181839 CYSTM1Q9H1C7 97 aa10.35□□□□□ -0.75
CDK13-201ENST00000181839 A8MU10 97 aa10.35□□□□□ -0.75
CDK13-201ENST00000181839 LAMA2P24043 3122 aaKnown RBP10.34□□□□□ -0.75
CDK13-201ENST00000181839 C10orf95Q9H7T3 257 aa10.29□□□□□ -0.76
CDK13-201ENST00000181839 DMBT1Q9UGM3 2413 aaPredicted RBP10.28□□□□□ -0.76
CDK13-201ENST00000181839 TEX15Q9BXT5 2789 aa10.28□□□□□ -0.76
CDK13-201ENST00000181839 NOTCH2NLQ7Z3S9 236 aa10.28□□□□□ -0.76
CDK13-201ENST00000181839 FREM2Q5SZK8 3169 aa10.24□□□□□ -0.77
CDK13-201ENST00000181839 Q5XG85 94 aa10.23□□□□□ -0.77
CDK13-201ENST00000181839 REV3LO60673 3130 aa10.22□□□□□ -0.77
CDK13-201ENST00000181839 TRIOO75962 3097 aa10.22□□□□□ -0.77
CDK13-201ENST00000181839 BRCA2P51587 3418 aa10.21□□□□□ -0.77
CDK13-201ENST00000181839 KRTAP10-8P60410 259 aa10.21□□□□□ -0.77
CDK13-201ENST00000181839 NBEAL1Q6ZS30 2694 aa10.2□□□□□ -0.78
CDK13-201ENST00000181839 CHD7Q9P2D1 2997 aa10.2□□□□□ -0.78
CDK13-201ENST00000181839 STAB1Q9NY15 2570 aa10.19□□□□□ -0.78
CDK13-201ENST00000181839 CHD6Q8TD26 2715 aa10.19□□□□□ -0.78
CDK13-201ENST00000181839 TNP1P09430 55 aa10.17□□□□□ -0.78
CDK13-201ENST00000181839 UNC80Q8N2C7 3258 aa10.16□□□□□ -0.78
CDK13-201ENST00000181839 LAMA3Q16787 3333 aa10.16□□□□□ -0.78
CDK13-201ENST00000181839 CRYBG3Q68DQ2 2970 aa10.11□□□□□ -0.79
CDK13-201ENST00000181839 KRTAP11-1Q8IUC1 163 aa10.11□□□□□ -0.79
CDK13-201ENST00000181839 KRTAP16-1A8MUX0 517 aa10.11□□□□□ -0.79
CDK13-201ENST00000181839 PRUNE2Q8WUY3 3088 aa10.1□□□□□ -0.79
CDK13-201ENST00000181839 DNAH14Q0VDD8 3507 aa10.08□□□□□ -0.8
CDK13-201ENST00000181839 MGAQ8IWI9 3026 aa10.04□□□□□ -0.8
CDK13-201ENST00000181839 RANBP2P49792 3224 aaKnown RBP10.02□□□□□ -0.81
CDK13-201ENST00000181839 FRYQ5TBA9 3013 aa10.02□□□□□ -0.81
CDK13-201ENST00000181839 CENPEQ02224 2701 aa10.02□□□□□ -0.81
CDK13-201ENST00000181839 TEP1Q99973 2627 aaKnown RBP10□□□□□ -0.81
CDK13-201ENST00000181839 COL6A5A8TX70 2615 aa9.98□□□□□ -0.81
CDK13-201ENST00000181839 NDUFAF8A1L188 74 aa9.97□□□□□ -0.81
CDK13-201ENST00000181839 WDFY4Q6ZS81 3184 aa9.97□□□□□ -0.81
CDK13-201ENST00000181839 KRTAP25-1Q3LHN0 102 aa9.96□□□□□ -0.82
CDK13-201ENST00000181839 CDH23Q9H251 3354 aa9.96□□□□□ -0.82
CDK13-201ENST00000181839 KRTAP13-2Q52LG2 175 aa9.95□□□□□ -0.82
CDK13-201ENST00000181839 UNC79Q9P2D8 2635 aa9.95□□□□□ -0.82
CDK13-201ENST00000181839 VPS13AQ96RL7 3174 aa9.95□□□□□ -0.82
CDK13-201ENST00000181839 COL6A3P12111 3177 aa9.95□□□□□ -0.82
CDK13-201ENST00000181839 KRTAP10-10P60014 251 aa9.94□□□□□ -0.82
CDK13-201ENST00000181839 SZT2Q5T011 3432 aa9.94□□□□□ -0.82
CDK13-201ENST00000181839 KRTAP4-16G5E9R7 235 aaPredicted RBP9.93□□□□□ -0.82
CDK13-201ENST00000181839 SETXQ7Z333 2677 aaKnown RBP9.92□□□□□ -0.82
CDK13-201ENST00000181839 STAB2Q8WWQ8 2551 aa9.91□□□□□ -0.82
CDK13-201ENST00000181839 BAHCC1Q9P281 2608 aa9.9□□□□□ -0.82
CDK13-201ENST00000181839 HTTP42858 3142 aa9.89□□□□□ -0.83
CDK13-201ENST00000181839 KRTAP29-1A8MX34 341 aaPredicted RBP9.87□□□□□ -0.83
CDK13-201ENST00000181839 RPS29P62273 56 aaKnown RBP9.87□□□□□ -0.83
CDK13-201ENST00000181839 SPEGQ15772 3267 aa9.86□□□□□ -0.83
CDK13-201ENST00000181839 Q6ZRN7 208 aaPredicted RBP9.85□□□□□ -0.83
CDK13-201ENST00000181839 CFAP47Q6ZTR5 3102 aa9.84□□□□□ -0.83
CDK13-201ENST00000181839 P0C880 135 aa9.84□□□□□ -0.83
CDK13-201ENST00000181839 VCANP13611 3396 aa9.77□□□□□ -0.85
CDK13-201ENST00000181839 ASB16-AS1Q495Z4 193 aa9.76□□□□□ -0.85
CDK13-201ENST00000181839 ITPR2Q14571 2701 aa9.75□□□□□ -0.85
CDK13-201ENST00000181839 GCN1Q92616 2671 aaKnown RBP9.72□□□□□ -0.85
CDK13-201ENST00000181839 CHD9Q3L8U1 2897 aa9.7□□□□□ -0.86
CDK13-201ENST00000181839 NBEAL2Q6ZNJ1 2754 aa9.69□□□□□ -0.86
CDK13-201ENST00000181839 PRO2289Q9P1D8 64 aa9.69□□□□□ -0.86
CDK13-201ENST00000181839 KRTAP7-1Q8IUC3 87 aa9.68□□□□□ -0.86
CDK13-201ENST00000181839 MAP1AP78559 2803 aaPredicted RBP9.64□□□□□ -0.87
CDK13-201ENST00000181839 XP32Q5T750 250 aa9.63□□□□□ -0.87
CDK13-201ENST00000181839 LAMA1P25391 3075 aa9.61□□□□□ -0.87
CDK13-201ENST00000181839 KALRNO60229 2985 aa9.6□□□□□ -0.87
CDK13-201ENST00000181839 NOTCH1P46531 2555 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms