RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 LINC00336Q6ZUF6 198 aa9.57□□□□□ -0.88
LAPTM4A-201ENST00000175091 SCXQ7RTU7 201 aa9.57□□□□□ -0.88
LAPTM4A-201ENST00000175091 C1orf137Q5JT78 98 aa9.55□□□□□ -0.88
LAPTM4A-201ENST00000175091 LRP1BQ9NZR2 4599 aa9.54□□□□□ -0.88
LAPTM4A-201ENST00000175091 TRBV7-7A0A0K0K1E9 115 aa9.52□□□□□ -0.88
LAPTM4A-201ENST00000175091 F8WEM9 126 aa9.52□□□□□ -0.88
LAPTM4A-201ENST00000175091 IGLV8-61A0A075B6I0 122 aa9.52□□□□□ -0.89
LAPTM4A-201ENST00000175091 SCGB1A1P11684 91 aa9.52□□□□□ -0.89
LAPTM4A-201ENST00000175091 ZNF861PO60384 105 aa9.51□□□□□ -0.89
LAPTM4A-201ENST00000175091 Q6JHZ5 121 aa9.51□□□□□ -0.89
LAPTM4A-201ENST00000175091 Q6Q795 121 aa9.5□□□□□ -0.89
LAPTM4A-201ENST00000175091 UBL5Q9BZL1 73 aa9.5□□□□□ -0.89
LAPTM4A-201ENST00000175091 DYNC1H1Q14204 4646 aaKnown RBP9.49□□□□□ -0.89
LAPTM4A-201ENST00000175091 A0A1B0GVY2 172 aa9.49□□□□□ -0.89
LAPTM4A-201ENST00000175091 A0A1W2PNM2 257 aa9.49□□□□□ -0.89
LAPTM4A-201ENST00000175091 HAMPP81172 84 aa9.49□□□□□ -0.89
LAPTM4A-201ENST00000175091 Q8NBF4 154 aa9.49□□□□□ -0.89
LAPTM4A-201ENST00000175091 SPRR4Q96PI1 79 aa9.49□□□□□ -0.89
LAPTM4A-201ENST00000175091 IGLV7-43P04211 117 aa9.48□□□□□ -0.89
LAPTM4A-201ENST00000175091 LINC00483Q53H64 154 aa9.47□□□□□ -0.89
LAPTM4A-201ENST00000175091 Q6ZVQ6 151 aa9.47□□□□□ -0.89
LAPTM4A-201ENST00000175091 ATP5EP2Q5VTU8 51 aa9.47□□□□□ -0.89
LAPTM4A-201ENST00000175091 IGFL1Q6UW32 110 aa9.47□□□□□ -0.89
LAPTM4A-201ENST00000175091 IMUPQ9GZP8 106 aa9.47□□□□□ -0.89
LAPTM4A-201ENST00000175091 ZNF706Q9Y5V0 76 aaPredicted RBP9.47□□□□□ -0.89
LAPTM4A-201ENST00000175091 A0A1B0GW54 56 aa9.46□□□□□ -0.9
LAPTM4A-201ENST00000175091 IGKV3D-7A0A0C4DH55 119 aa9.44□□□□□ -0.9
LAPTM4A-201ENST00000175091 PCP4P48539 62 aa9.42□□□□□ -0.9
LAPTM4A-201ENST00000175091 VPS13BQ7Z7G8 4022 aa9.42□□□□□ -0.9
LAPTM4A-201ENST00000175091 A0A0G2JQZ4 141 aa9.41□□□□□ -0.9
LAPTM4A-201ENST00000175091 CRYGAP11844 174 aa9.41□□□□□ -0.9
LAPTM4A-201ENST00000175091 APOBP04114 4563 aaKnown RBP9.41□□□□□ -0.9
LAPTM4A-201ENST00000175091 RYR3Q15413 4870 aa9.4□□□□□ -0.91
LAPTM4A-201ENST00000175091 CXCL6P80162 114 aa9.37□□□□□ -0.91
LAPTM4A-201ENST00000175091 IGLV9-49A0A0B4J1Y8 123 aa9.36□□□□□ -0.91
LAPTM4A-201ENST00000175091 NREPQ16612 68 aa9.36□□□□□ -0.91
LAPTM4A-201ENST00000175091 RPL37AP61513 92 aaKnown RBP9.35□□□□□ -0.91
LAPTM4A-201ENST00000175091 C9orf153Q5TBE3 101 aa9.35□□□□□ -0.91
LAPTM4A-201ENST00000175091 FAM236AA0A1B0GUQ0 79 aa9.34□□□□□ -0.91
LAPTM4A-201ENST00000175091 FAM236BA0A1B0GV22 79 aa9.34□□□□□ -0.91
LAPTM4A-201ENST00000175091 ANAPC11Q9NYG5 84 aa9.34□□□□□ -0.91
LAPTM4A-201ENST00000175091 A0A087WVE0 104 aa9.33□□□□□ -0.92
LAPTM4A-201ENST00000175091 HIST1H4AP62805 103 aaKnown RBP9.32□□□□□ -0.92
LAPTM4A-201ENST00000175091 A0A087WSZ3 146 aa9.32□□□□□ -0.92
LAPTM4A-201ENST00000175091 MOBPQ13875 183 aa9.31□□□□□ -0.92
LAPTM4A-201ENST00000175091 BPY2O14599 106 aa9.29□□□□□ -0.92
LAPTM4A-201ENST00000175091 FAT1Q14517 4588 aa9.27□□□□□ -0.93
LAPTM4A-201ENST00000175091 ANAPC13Q9BS18 74 aa9.25□□□□□ -0.93
LAPTM4A-201ENST00000175091 IGKV4-1P06312 121 aa9.24□□□□□ -0.93
LAPTM4A-201ENST00000175091 KRTAP1-4P0C5Y4 121 aa9.24□□□□□ -0.93
LAPTM4A-201ENST00000175091 FAM229BQ4G0N7 80 aa9.23□□□□□ -0.93
LAPTM4A-201ENST00000175091 Q8N9L7 120 aa9.23□□□□□ -0.93
LAPTM4A-201ENST00000175091 A0A087X002 238 aa9.22□□□□□ -0.93
LAPTM4A-201ENST00000175091 SMR3BP02814 79 aaPredicted RBP9.22□□□□□ -0.93
LAPTM4A-201ENST00000175091 DSCR10P59022 87 aa9.22□□□□□ -0.93
LAPTM4A-201ENST00000175091 ATOX1O00244 68 aa9.2□□□□□ -0.94
LAPTM4A-201ENST00000175091 KRTAP13-2Q52LG2 175 aa9.19□□□□□ -0.94
LAPTM4A-201ENST00000175091 SPINK6Q6UWN8 80 aa9.19□□□□□ -0.94
LAPTM4A-201ENST00000175091 SSBP3-AS1Q7Z2R9 100 aa9.19□□□□□ -0.94
LAPTM4A-201ENST00000175091 LINC00472Q9H8W2 130 aa9.19□□□□□ -0.94
LAPTM4A-201ENST00000175091 KRTAP10-4P60372 401 aaPredicted RBP9.19□□□□□ -0.94
LAPTM4A-201ENST00000175091 HRCT1Q6UXD1 115 aa9.19□□□□□ -0.94
LAPTM4A-201ENST00000175091 SS18L2Q9UHA2 77 aa9.18□□□□□ -0.94
LAPTM4A-201ENST00000175091 K7EQZ3 153 aa9.17□□□□□ -0.94
LAPTM4A-201ENST00000175091 CD164Q04900 197 aa9.17□□□□□ -0.94
LAPTM4A-201ENST00000175091 DEFB116Q30KQ4 102 aa9.17□□□□□ -0.94
LAPTM4A-201ENST00000175091 Q96NJ1 140 aa9.15□□□□□ -0.94
LAPTM4A-201ENST00000175091 HSPG2P98160 4391 aa9.14□□□□□ -0.95
LAPTM4A-201ENST00000175091 PLA2G1BP04054 148 aaKnown RBP9.12□□□□□ -0.95
LAPTM4A-201ENST00000175091 J3KT08 172 aa9.11□□□□□ -0.95
LAPTM4A-201ENST00000175091 PKHD1L1Q86WI1 4243 aa9.1□□□□□ -0.95
LAPTM4A-201ENST00000175091 A8MWP4 228 aa9.09□□□□□ -0.95
LAPTM4A-201ENST00000175091 RYR1P21817 5038 aa9.09□□□□□ -0.95
LAPTM4A-201ENST00000175091 CDK2AP2O75956 126 aa9.09□□□□□ -0.95
LAPTM4A-201ENST00000175091 SERP2Q8N6R1 65 aa9.08□□□□□ -0.96
LAPTM4A-201ENST00000175091 CCDC179H3BU77 68 aa9.07□□□□□ -0.96
LAPTM4A-201ENST00000175091 COX7CP15954 63 aa9.07□□□□□ -0.96
LAPTM4A-201ENST00000175091 PRR15Q8IV56 129 aa9.07□□□□□ -0.96
LAPTM4A-201ENST00000175091 HCG22E2RYF7 251 aa9.05□□□□□ -0.96
LAPTM4A-201ENST00000175091 UQCRQO14949 82 aa9.05□□□□□ -0.96
LAPTM4A-201ENST00000175091 ASB16-AS1Q495Z4 193 aa9.05□□□□□ -0.96
LAPTM4A-201ENST00000175091 TYMSOSQ8TAI1 123 aa9.05□□□□□ -0.96
LAPTM4A-201ENST00000175091 SMIM20Q8N5G0 67 aa9.04□□□□□ -0.96
LAPTM4A-201ENST00000175091 EPPK1P58107 5090 aaKnown RBP9.04□□□□□ -0.96
LAPTM4A-201ENST00000175091 Q5XG85 94 aa9.04□□□□□ -0.96
LAPTM4A-201ENST00000175091 PRR26Q8N8Z3 221 aa9.03□□□□□ -0.96
LAPTM4A-201ENST00000175091 TRAV7A0A075B6U4 112 aa9.02□□□□□ -0.97
LAPTM4A-201ENST00000175091 FAM229AH3BQW9 127 aa9.01□□□□□ -0.97
LAPTM4A-201ENST00000175091 NDUFB1O75438 58 aa9.01□□□□□ -0.97
LAPTM4A-201ENST00000175091 OCR1Q9BZK8 76 aa9□□□□□ -0.97
LAPTM4A-201ENST00000175091 KIAA1109Q2LD37 5005 aa9□□□□□ -0.97
LAPTM4A-201ENST00000175091 KRTAP29-1A8MX34 341 aaPredicted RBP8.99□□□□□ -0.97
LAPTM4A-201ENST00000175091 Q5VSD8 79 aa8.99□□□□□ -0.97
LAPTM4A-201ENST00000175091 LIMD2Q9BT23 127 aa8.99□□□□□ -0.97
LAPTM4A-201ENST00000175091 MMP24-AS1A0A0U1RRL7 71 aa8.98□□□□□ -0.97
LAPTM4A-201ENST00000175091 WFDC13Q8IUB5 93 aa8.98□□□□□ -0.97
LAPTM4A-201ENST00000175091 A0A1B0GVX0 72 aa8.97□□□□□ -0.97
LAPTM4A-201ENST00000175091 SPINK1P00995 79 aa8.96□□□□□ -0.97
LAPTM4A-201ENST00000175091 CASC2Q6XLA1 102 aa8.96□□□□□ -0.98
LAPTM4A-201ENST00000175091 LINC00304Q8N9R0 145 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms