RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Cnn3Q9DAW9 330 aaKnown RBP17.79■□□□□ 0.44
Upf3a-201ENSMUST00000043767 Samd10Q7TST3 202 aa17.78■□□□□ 0.44
Upf3a-201ENSMUST00000043767 Ighv9-4A0A0A6YWH6 117 aa17.78■□□□□ 0.44
Upf3a-201ENSMUST00000043767 Olfr433Q7TRV9 314 aa17.78■□□□□ 0.44
Upf3a-201ENSMUST00000043767 Slc36a4Q8CH36 500 aa17.78■□□□□ 0.44
Upf3a-201ENSMUST00000043767 Olfr982Q8VGB3 321 aa17.78■□□□□ 0.44
Upf3a-201ENSMUST00000043767 Usp9yF8VPU6 2556 aa17.77■□□□□ 0.44
Upf3a-201ENSMUST00000043767 Trav9-1A0A075B601 112 aa17.77■□□□□ 0.44
Upf3a-201ENSMUST00000043767 Olfr1293-psA0A1L1SVB5 326 aa17.77■□□□□ 0.44
Upf3a-201ENSMUST00000043767 Rnase9P60154 184 aa17.77■□□□□ 0.44
Upf3a-201ENSMUST00000043767 Tmem11Q8BK08 190 aa17.77■□□□□ 0.44
Upf3a-201ENSMUST00000043767 Habp2Q8K0D2 558 aa17.77■□□□□ 0.44
Upf3a-201ENSMUST00000043767 Cotl1Q9CQI6 142 aa17.77■□□□□ 0.44
Upf3a-201ENSMUST00000043767 Trav4-4-dv10A0A075B651 110 aa17.76■□□□□ 0.43
Upf3a-201ENSMUST00000043767 RhogP84096 191 aa17.76■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Ang3P97802 145 aa17.76■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Msrb3Q8BU85 253 aa17.76■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Zfp53Q9Z117 652 aa17.76■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Olfr1436A0PK57 315 aa17.76■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Gm21060J3KMU4 56 aa17.76■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Gm21900J3QP38 180 aa17.76■□□□□ 0.43
Upf3a-201ENSMUST00000043767 CebpgP53568 150 aa17.76■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Trav15-1-dv6-1Q5R1D2 117 aa17.76■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Megf10Q6DIB5 1147 aa17.76■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Duxbl2Q7TNE6 350 aa17.76■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Olfr127Q8VF25 323 aa17.76■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Gatad1Q920S3 266 aa17.76■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Hsbp1l1B2RXB2 72 aa17.75■□□□□ 0.43
Upf3a-201ENSMUST00000043767 PigpQ9JHG1 132 aa17.75■□□□□ 0.43
Upf3a-201ENSMUST00000043767 FlnbQ80X90 2602 aaKnown RBP17.75■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Zfp114B2RRA8 586 aa17.75■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Gm9376G3UW68 176 aa17.75■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Gm11027G8JL69 66 aa17.75■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Scgb1b3J3QJY4 93 aa17.75■□□□□ 0.43
Upf3a-201ENSMUST00000043767 PigyP0C1P0 71 aa17.75■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Rasl11aQ6IMB1 242 aa17.75■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Olfr954Q9EQB6 314 aa17.75■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Ube2l3P68037 154 aaKnown RBP17.74■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Gm10188Q3V432 135 aa17.74■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Olfr1535Q7TQU0 326 aa17.74■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Olfr1195Q8VG21 308 aa17.74■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Olfr1336Q8VGH5 314 aa17.74■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Cldn16Q925N4 235 aa17.74■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Cxcl14Q9WUQ5 99 aa17.74■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Ighv1-4A0A075B5T4 117 aa17.73■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Trav7n-4A0A075B620 113 aa17.73■□□□□ 0.43
Upf3a-201ENSMUST00000043767 BC030500E9Q6W0 185 aa17.73■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Cd200r3Q5UKY4 296 aa17.73■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Zmat4Q8BZ94 229 aa17.73■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Nav3Q80TN7 2359 aa17.73■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Trav16A0A075B653 116 aa17.73■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Ins2P01326 110 aa17.73■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Znf641Q8BZ34 422 aa17.73■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Vmn1r202Q8R259 302 aa17.73■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Mettl26Q9DCS2 204 aa17.73■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Igkv1-131A0A140T8M8 120 aa17.72■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Ly6lH3BJG9 140 aa17.72■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Gm9602J3QPD5 205 aa17.72■□□□□ 0.43
Upf3a-201ENSMUST00000043767 P01787 123 aa17.72■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Fabp6P51162 128 aa17.72■□□□□ 0.43
Upf3a-201ENSMUST00000043767 B430305J03RikQ8BQQ8 176 aa17.72■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Olfr1199Q8VF94 310 aa17.72■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Trav3n-3A0A0G2JEM0 114 aa17.71■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Esp23A8R0V5 104 aa17.71■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Nus1Q99LJ8 297 aa17.71■□□□□ 0.43
Upf3a-201ENSMUST00000043767 ChtopQ9CY57 249 aaKnown RBP17.71■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Vmn1r61W4VSP5 300 aa17.71■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Gm7849D3YX03 116 aa17.71■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Gm3512L7N206 146 aa17.71■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Gm10226O88253 85 aa17.71■□□□□ 0.43
Upf3a-201ENSMUST00000043767 A930003A15RikQ3U552 87 aa17.71■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Oxld1Q9CR10 201 aa17.71■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Ramp1Q9WTJ5 148 aa17.71■□□□□ 0.43
Upf3a-201ENSMUST00000043767 Gm21874J3QNZ6 232 aa17.7■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Olfr1419Q7TQS2 343 aa17.7■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Tmem140Q8BGY5 185 aa17.7■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Chd6A3KFM7 2711 aa17.7■□□□□ 0.42
Upf3a-201ENSMUST00000043767 P01748 117 aa17.7■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Txn2P97493 166 aa17.7■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Defb26Q30KN7 186 aa17.7■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Necap1Q9CR95 275 aa17.7■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Ube2cQ9D1C1 179 aa17.7■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Chd9Q8BYH8 2885 aa17.69■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Ighv1-22A0A075B5U7 117 aa17.69■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Rnf212bD3Z423 297 aa17.69■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Gm5294J3QP53 216 aa17.69■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Tac3P55099 116 aa17.69■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Eda2rQ8BX35 297 aa17.69■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Rasl11bQ922H7 247 aa17.69■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Tmed6Q9CQG0 239 aa17.69■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Ccl24Q9JKC0 119 aa17.69■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Plcxd2B2RXA1 340 aa17.68■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Amn1B8JKV0 258 aa17.68■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Gm10521E9PZK0 135 aa17.68■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Sox15P43267 231 aa17.68■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Necap2Q9D1J1 266 aa17.68■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Gm9964E9Q9S5 144 aa17.67■□□□□ 0.42
Upf3a-201ENSMUST00000043767 P03980 138 aa17.67■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Fbln7Q501P1 440 aa17.67■□□□□ 0.42
Upf3a-201ENSMUST00000043767 Ifna11Q61716 190 aa17.67■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms