RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Tcrg-C1A0A075B5Z0 172 aa11.68□□□□□ -0.54
Col4a1-201ENSMUST00000033898 P01638 115 aa11.68□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Ckap5A2AGT5 2032 aaKnown RBP11.68□□□□□ -0.54
Col4a1-201ENSMUST00000033898 1500009C09RikD3YYW9 81 aa11.68□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Ly6c1P0CW02 131 aa11.68□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Tmem256Q5F285 113 aa11.68□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Atp6v0e1Q9CQD8 81 aa11.68□□□□□ -0.54
Col4a1-201ENSMUST00000033898 CfdP03953 259 aa11.68□□□□□ -0.54
Col4a1-201ENSMUST00000033898 3110021N24RikJ3QMN2 152 aa11.68□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Hoxd3P09027 433 aa11.68□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Csrp3P50462 194 aa11.68□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Csrp1P97315 193 aaKnown RBP11.68□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Gm10384Q3UQ87 92 aa11.68□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Mrpl27Q99N92 148 aa11.68□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Fam216aQ9DB54 251 aa11.67□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Tomm40Q9QYA2 361 aa11.67□□□□□ -0.54
Col4a1-201ENSMUST00000033898 1700084M14RikB1AT01 78 aa11.67□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Higd1bQ99JY6 98 aa11.67□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Shisa9Q9CZN4 424 aa11.67□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Atp23Q9CWQ3 201 aa11.67□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Heatr1G3X9B1 2143 aaKnown RBP11.67□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Ang2Q64438 145 aa11.67□□□□□ -0.54
Col4a1-201ENSMUST00000033898 1700025B11RikA0A087WNZ6 93 aa11.67□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Cacna1eQ61290 2272 aa11.66□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Cela2aP05208 271 aa11.66□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Hist3h2bbQ8CGP0 126 aa11.66□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Hist3h2baQ9D2U9 126 aa11.66□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Colca2F8VPY8 239 aa11.66□□□□□ -0.54
Col4a1-201ENSMUST00000033898 P01680 129 aa11.66□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Tex48Q9DA81 110 aa11.66□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Foxl2O88470 375 aa11.66□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Ighv1-9A0A0A6YW37 117 aa11.66□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Col4a3Q9QZS0 1669 aa11.66□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Ighv1-69A0A0G2JFS5 117 aa11.66□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Trav3-4A0A075B654 114 aa11.65□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Sp5Q9JHX2 398 aa11.65□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Dad1P61804 113 aa11.65□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Nrxn2E9Q7X7 1710 aa11.65□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Cox6a1P43024 111 aa11.65□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Plxna1P70206 1894 aa11.65□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Igkv8-16A0A0G2JDG9 121 aa11.65□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Tctex1d4Q8CDY7 219 aa11.65□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Sec11aQ9R0P6 179 aa11.65□□□□□ -0.54
Col4a1-201ENSMUST00000033898 OtofQ9ESF1 1997 aa11.65□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Gm4744D3Z3S5 154 aa11.65□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Gm10912Q3UXH0 145 aa11.65□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Pxt1Q8K459 51 aa11.65□□□□□ -0.54
Col4a1-201ENSMUST00000033898 Lime1Q9EQR5 269 aa11.65□□□□□ -0.54
Col4a1-201ENSMUST00000033898 1700031F05RikB1AX30 191 aa11.65□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Cox11Q6P8I6 275 aa11.65□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Dock8Q8C147 2100 aa11.64□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Rnf5O35445 180 aa11.64□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Ndufa3Q9CQ91 84 aa11.64□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Gatd1Q8BFQ8 220 aa11.64□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Spaca3Q9D9X8 221 aa11.64□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Zfp648D3Z0W3 525 aa11.64□□□□□ -0.55
Col4a1-201ENSMUST00000033898 PdpnQ62011 172 aa11.64□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Timm21Q8CCM6 249 aa11.64□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Tcrg-V5A0A0G2JGV5 113 aa11.64□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Ly75Q60767 1723 aa11.64□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Ighv3-4A0A0A6YXF1 117 aa11.64□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Gm15294V9GXA7 121 aa11.64□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Igkv4-58A0A0G2JGI6 119 aa11.63□□□□□ -0.55
Col4a1-201ENSMUST00000033898 KprpB2RUR4 657 aa11.63□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Igkv14-126A0A075B5K0 117 aa11.63□□□□□ -0.55
Col4a1-201ENSMUST00000033898 4930546C10RikE9Q4Y3 121 aa11.63□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Prh1P05142 261 aa11.63□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Supt4h1aP63271 117 aa11.63□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Igkv8-34A0A0G2JDU0 121 aa11.63□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Mcm3apQ9WUU9 1971 aa11.62□□□□□ -0.55
Col4a1-201ENSMUST00000033898 NrtnP97463 195 aa11.62□□□□□ -0.55
Col4a1-201ENSMUST00000033898 PmvkQ9D1G2 192 aa11.62□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Trbv12-2A0A0B4J1H1 124 aa11.62□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Rnf126Q91YL2 313 aa11.62□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Tmem190Q9D2E9 166 aa11.62□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Bcl6bO88282 474 aa11.62□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Iglc2P01844 104 aa11.62□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Zfhx2Q2MHN3 2562 aa11.62□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Pi4kaE9Q3L2 2105 aa11.62□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Ighv1-36A0A0A6YXT2 117 aa11.61□□□□□ -0.55
Col4a1-201ENSMUST00000033898 P01655 112 aa11.61□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Ube2cQ9D1C1 179 aa11.61□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Smim10l1A0A087WNQ7 89 aa11.61□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Trbv12-1A0A0B4J1H0 124 aa11.61□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Klrd1O54707 179 aa11.61□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Igh-VJ558P01758 117 aa11.61□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Fgf16Q9ESL8 207 aa11.61□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Atp5iQ06185 71 aaKnown RBP11.6□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Igkv4-74A0A0B4J1I3 119 aa11.6□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Gm16381A0A1Y7VKT9 73 aa11.6□□□□□ -0.55
Col4a1-201ENSMUST00000033898 P01790 122 aa11.6□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Wt1P22561 449 aa11.59□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Gm815Q3UWS2 115 aa11.59□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Fgf4P11403 202 aa11.59□□□□□ -0.55
Col4a1-201ENSMUST00000033898 C1qtnf5Q8K479 243 aa11.59□□□□□ -0.55
Col4a1-201ENSMUST00000033898 LeprotO89013 131 aa11.59□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Mrps21P58059 87 aa11.59□□□□□ -0.55
Col4a1-201ENSMUST00000033898 SlpiP97430 131 aa11.59□□□□□ -0.55
Col4a1-201ENSMUST00000033898 Spata46Q4FZF2 204 aa11.59□□□□□ -0.55
Col4a1-201ENSMUST00000033898 F930015N05RikQ8C3A3 210 aa11.59□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 401.1 ms