RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Tmem136Q3TYE7 245 aa10.27□□□□□ -0.76
Clcn3-201ENSMUST00000004430 PdpnQ62011 172 aa10.27□□□□□ -0.76
Clcn3-201ENSMUST00000004430 COA4Q8BT51 87 aa10.27□□□□□ -0.76
Clcn3-201ENSMUST00000004430 Vmn1r197Q8R265 298 aa10.27□□□□□ -0.76
Clcn3-201ENSMUST00000004430 Ighv1-19A0A0A6YWX0 117 aa10.27□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Wt1P22561 449 aa10.27□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Card19Q9D1I2 183 aa10.27□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Slamf6Q9ET39 351 aa10.27□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Ranbp2Q9ERU9 3053 aaKnown RBP10.27□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Trav21-dv12A0A075B6C4 109 aa10.27□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Trav7-2Q5R1I3 112 aa10.27□□□□□ -0.77
Clcn3-201ENSMUST00000004430 EpopQ7TNS8 369 aa10.27□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Ighv8-6A0A0A6YXA3 118 aa10.26□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Igkv6-23A0A140T8N5 115 aa10.26□□□□□ -0.77
Clcn3-201ENSMUST00000004430 P04946 108 aa10.26□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Znf691Q3TDE8 283 aa10.26□□□□□ -0.77
Clcn3-201ENSMUST00000004430 FrylF8VQ05 3007 aa10.26□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Trav12-3A0A075B648 115 aa10.26□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Gm6525A0A0A6YW33 106 aa10.26□□□□□ -0.77
Clcn3-201ENSMUST00000004430 NbasE9Q411 2356 aa10.26□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Trav4-4-dv10A0A075B651 110 aa10.26□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Ighv9-3A0A0B4J1J5 117 aa10.26□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Tmem238lA0A1B0GS74 79 aa10.26□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Olfr904Q7TRC9 310 aa10.26□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Gpx7Q99LJ6 186 aa10.26□□□□□ -0.77
Clcn3-201ENSMUST00000004430 AY761184Q9D848 116 aa10.26□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Dchs2A0A0A6YW72 3346 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Tmem141A2AJB2 108 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 1700067P10RikG3X8U2 183 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Insl3O09107 122 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 9130213A22RikQ3V3T2 120 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Gm10118Q8C8J5 116 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Klk7Q91VE3 249 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Fmc1Q9CR13 113 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 AtmQ62388 3066 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Gm21370Q3T9V6 190 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Prr3Q811B5 190 aaKnown RBP10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Gm11733Q8BQP1 125 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Klk10Q99M20 278 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Sec11aQ9R0P6 179 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Cspg4Q8VHY0 2327 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Lama1P19137 3084 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Hint1P70349 126 aaKnown RBP10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Rbfox3Q8BIF2 374 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 3100002H09RikQ9CXW6 140 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Tax1bp3Q9DBG9 124 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Rab37Q9JKM7 223 aa10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Dnajb12Q9QYI4 376 aaKnown RBP10.25□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Cdx4Q07424 282 aa10.24□□□□□ -0.77
Clcn3-201ENSMUST00000004430 F930015N05RikQ8C3A3 210 aa10.24□□□□□ -0.77
Clcn3-201ENSMUST00000004430 TctaQ8VEA7 122 aa10.24□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Rnf125Q9D9R0 233 aa10.24□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Gm28269A0A087WSG3 125 aa10.24□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Gm45785A0A1B0GT05 94 aa10.24□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Gm10188Q3V432 135 aa10.24□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Olfr761Q7TRJ0 323 aa10.24□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Prok1Q14A28 105 aa10.24□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Gm6899Q3USS0 134 aa10.24□□□□□ -0.77
Clcn3-201ENSMUST00000004430 QrfpQ8CE23 124 aa10.24□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Ighv1-22A0A075B5U7 117 aa10.23□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Olfr1337A2ACY8 315 aa10.23□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Fhl4Q8CDC8 279 aa10.23□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Plscr4P58196 326 aa10.23□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Slc25a20Q9Z2Z6 301 aaKnown RBP10.23□□□□□ -0.77
Clcn3-201ENSMUST00000004430 P01674 108 aa10.23□□□□□ -0.77
Clcn3-201ENSMUST00000004430 LtaP09225 202 aa10.23□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Rps20P60867 119 aaKnown RBP10.23□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Tmem88bQ3TYP4 173 aa10.23□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Prima1Q810F0 153 aa10.23□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Tmem8bB1AWJ5 472 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Cxcl13O55038 109 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 PolP10400 120 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Gm4792Q569Q2 183 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Mtatp8P03930 67 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Cdkn1aP39689 159 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Gnb1lQ9EQ15 326 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Rab9aQ9R0M6 201 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Ins2P01326 110 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Cd24P24807 76 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Ripply2Q2WG76 128 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Tex48Q9DA81 110 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Gm12845A0A0N4SUM5 588 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Igkv6-15A0A140T8M5 115 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Saa3P04918 122 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Immp1lQ9CQU8 166 aa10.22□□□□□ -0.77
Clcn3-201ENSMUST00000004430 1700084M14RikB1AT01 78 aa10.21□□□□□ -0.77
Clcn3-201ENSMUST00000004430 KprpB2RUR4 657 aa10.21□□□□□ -0.77
Clcn3-201ENSMUST00000004430 P01724 129 aa10.21□□□□□ -0.77
Clcn3-201ENSMUST00000004430 P01727 129 aa10.21□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Arpc1aQ9R0Q6 370 aa10.21□□□□□ -0.77
Clcn3-201ENSMUST00000004430 Ighv5-6A0A075B5Q0 117 aa10.21□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Slc25a16Q8C0K5 332 aa10.21□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gm5105Q8C6Y9 112 aa10.21□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Iba57Q8CAK1 358 aaKnown RBP10.21□□□□□ -0.78
Clcn3-201ENSMUST00000004430 NpbQ8K4P1 119 aa10.21□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Vmn1r216Q8R257 298 aa10.21□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gpx1P11352 201 aa10.21□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Cd5P13379 494 aa10.21□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Loxl1P97873 607 aa10.21□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gm5150Q1AN92 299 aa10.21□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 113.2 ms