RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 COL7A1Q02388 2944 aa7.72□□□□□ -1.17
CLN6-217ENST00000636964 NDUFS5O43920 106 aa7.72□□□□□ -1.17
CLN6-217ENST00000636964 SND1-IT1Q9HBX3 110 aa7.72□□□□□ -1.17
CLN6-217ENST00000636964 PRR34Q9NV39 138 aa7.72□□□□□ -1.17
CLN6-217ENST00000636964 HUWE1Q7Z6Z7 4374 aaKnown RBP7.72□□□□□ -1.17
CLN6-217ENST00000636964 Q8IZM0 81 aa7.72□□□□□ -1.17
CLN6-217ENST00000636964 FUSP35637 526 aaKnown RBP eCLIP7.71□□□□□ -1.171e-9■■■■■ 32
CLN6-217ENST00000636964 CCL18P55774 89 aa7.71□□□□□ -1.17
CLN6-217ENST00000636964 KIAA0087Q14695 138 aa7.71□□□□□ -1.17
CLN6-217ENST00000636964 LINC00588Q9Y4M8 146 aa7.71□□□□□ -1.17
CLN6-217ENST00000636964 CSMD3Q7Z407 3707 aa7.71□□□□□ -1.18
CLN6-217ENST00000636964 C9orf116Q5BN46 136 aaPredicted RBP7.71□□□□□ -1.18
CLN6-217ENST00000636964 TRAV10A0A0B4J240 114 aa7.7□□□□□ -1.18
CLN6-217ENST00000636964 PSPHP1O15172 72 aa7.7□□□□□ -1.18
CLN6-217ENST00000636964 NDUFC1O43677 76 aa7.7□□□□□ -1.18
CLN6-217ENST00000636964 SPTSSBQ8NFR3 76 aa7.7□□□□□ -1.18
CLN6-217ENST00000636964 TRAV7A0A075B6U4 112 aa7.7□□□□□ -1.18
CLN6-217ENST00000636964 A8MUN3 132 aa7.7□□□□□ -1.18
CLN6-217ENST00000636964 IBA57-AS1B1ANH7 110 aa7.7□□□□□ -1.18
CLN6-217ENST00000636964 Q6ZVQ6 151 aa7.69□□□□□ -1.18
CLN6-217ENST00000636964 C10orf25Q5T742 122 aa7.68□□□□□ -1.18
CLN6-217ENST00000636964 SPAG11BQ08648 103 aa7.68□□□□□ -1.18
CLN6-217ENST00000636964 UNQ6190/PRO20217Q6UXQ8 127 aa7.68□□□□□ -1.18
CLN6-217ENST00000636964 UBE2BP63146 152 aa7.67□□□□□ -1.18
CLN6-217ENST00000636964 H0YGX0 51 aa7.66□□□□□ -1.18
CLN6-217ENST00000636964 HIGD2BQ4VC39 106 aa7.66□□□□□ -1.18
CLN6-217ENST00000636964 IGKV2D-24A0A075B6R9 120 aa7.65□□□□□ -1.18
CLN6-217ENST00000636964 LRCOL1A6NCL2 159 aa7.65□□□□□ -1.18
CLN6-217ENST00000636964 M0R2N4 97 aa7.65□□□□□ -1.18
CLN6-217ENST00000636964 PRR3P79522 188 aaKnown RBP7.65□□□□□ -1.19
CLN6-217ENST00000636964 LINC01556Q5JQF7 62 aa7.65□□□□□ -1.19
CLN6-217ENST00000636964 LINC00167Q96N53 147 aa7.65□□□□□ -1.19
CLN6-217ENST00000636964 ORMDL1Q9P0S3 153 aa7.65□□□□□ -1.19
CLN6-217ENST00000636964 KRTAP26-1Q6PEX3 210 aa7.63□□□□□ -1.19
CLN6-217ENST00000636964 LCA10Q71F78 164 aa7.63□□□□□ -1.19
CLN6-217ENST00000636964 A8MU10 97 aa7.63□□□□□ -1.19
CLN6-217ENST00000636964 B9D2Q9BPU9 175 aa7.61□□□□□ -1.19
CLN6-217ENST00000636964 DNAH9Q9NYC9 4486 aa7.61□□□□□ -1.19
CLN6-217ENST00000636964 DNAH10OSP0CZ25 163 aa7.61□□□□□ -1.19
CLN6-217ENST00000636964 ATP5EP2Q5VTU8 51 aa7.6□□□□□ -1.19
CLN6-217ENST00000636964 Q8N814 137 aa7.6□□□□□ -1.19
CLN6-217ENST00000636964 C6orf48Q9UBA6 75 aa7.6□□□□□ -1.19
CLN6-217ENST00000636964 COX17Q14061 63 aa7.59□□□□□ -1.19
CLN6-217ENST00000636964 C15orf56Q8N910 161 aa7.59□□□□□ -1.19
CLN6-217ENST00000636964 NKAPP1Q8N9T2 125 aa7.59□□□□□ -1.19
CLN6-217ENST00000636964 Q8NDZ9 215 aa7.59□□□□□ -1.19
CLN6-217ENST00000636964 A0A0A0MQY5 61 aa7.59□□□□□ -1.19
CLN6-217ENST00000636964 PHF5AQ7RTV0 110 aaKnown RBP7.59□□□□□ -1.19
CLN6-217ENST00000636964 CAMK2N2Q96S95 79 aa7.59□□□□□ -1.19
CLN6-217ENST00000636964 Q1T7F1 81 aa7.58□□□□□ -1.2
CLN6-217ENST00000636964 TRBV10-3A0A0K0K1G6 114 aa7.58□□□□□ -1.2
CLN6-217ENST00000636964 CASC10Q5T4H9 136 aa7.58□□□□□ -1.2
CLN6-217ENST00000636964 Q6ZRP5 223 aa7.58□□□□□ -1.2
CLN6-217ENST00000636964 C7orf65Q6ZTY9 151 aa7.58□□□□□ -1.2
CLN6-217ENST00000636964 XAGE1AQ9HD64 81 aa7.58□□□□□ -1.2
CLN6-217ENST00000636964 LYSTQ99698 3801 aa7.58□□□□□ -1.2
CLN6-217ENST00000636964 SYCNQ0VAF6 134 aa7.57□□□□□ -1.2
CLN6-217ENST00000636964 TGP01266 2768 aa7.57□□□□□ -1.2
CLN6-217ENST00000636964 JMJD7-PLA2G4BH0Y9G9 81 aa7.56□□□□□ -1.2
CLN6-217ENST00000636964 Q6ZQT0 140 aa7.56□□□□□ -1.2
CLN6-217ENST00000636964 LINC01547P58512 204 aaPredicted RBP7.56□□□□□ -1.2
CLN6-217ENST00000636964 TRAV22A0A0B4J277 110 aa7.55□□□□□ -1.2
CLN6-217ENST00000636964 BCE1O60756 84 aa7.55□□□□□ -1.2
CLN6-217ENST00000636964 DNHD1Q96M86 4753 aa7.55□□□□□ -1.2
CLN6-217ENST00000636964 UBE2AP49459 152 aa7.55□□□□□ -1.2
CLN6-217ENST00000636964 DIRC1Q969H9 104 aa7.55□□□□□ -1.2
CLN6-217ENST00000636964 UBL5Q9BZL1 73 aa7.55□□□□□ -1.2
CLN6-217ENST00000636964 MEGF8Q7Z7M0 2845 aa7.54□□□□□ -1.2
CLN6-217ENST00000636964 GVQW2A0A096LPI5 108 aaPredicted RBP7.53□□□□□ -1.2
CLN6-217ENST00000636964 UBE2DNLQ8IWF7 75 aa7.53□□□□□ -1.2
CLN6-217ENST00000636964 APLNQ9ULZ1 77 aa7.53□□□□□ -1.2
CLN6-217ENST00000636964 KRTAP1-5Q9BYS1 174 aa7.52□□□□□ -1.21
CLN6-217ENST00000636964 TRBV7-4A0A0J9YYF1 115 aa7.52□□□□□ -1.21
CLN6-217ENST00000636964 C16orf90A8MZG2 172 aa7.52□□□□□ -1.21
CLN6-217ENST00000636964 LINC00313P59037 77 aa7.52□□□□□ -1.21
CLN6-217ENST00000636964 ATP11AUNQ6ZP68 121 aa7.52□□□□□ -1.21
CLN6-217ENST00000636964 PRKDCP78527 4128 aaKnown RBP7.51□□□□□ -1.21
CLN6-217ENST00000636964 CHKB-CPT1BH3BT56 60 aa7.5□□□□□ -1.21
CLN6-217ENST00000636964 TMEM254Q8TBM7 123 aa7.5□□□□□ -1.21
CLN6-217ENST00000636964 HCG22E2RYF7 251 aa7.5□□□□□ -1.21
CLN6-217ENST00000636964 HAMPP81172 84 aa7.5□□□□□ -1.21
CLN6-217ENST00000636964 LCE2DQ5TA82 110 aaPredicted RBP7.5□□□□□ -1.21
CLN6-217ENST00000636964 C6orf99Q4VX62 202 aa7.5□□□□□ -1.21
CLN6-217ENST00000636964 SCXQ7RTU7 201 aa7.49□□□□□ -1.21
CLN6-217ENST00000636964 LOC110117498A0A087WWA1 95 aa7.49□□□□□ -1.21
CLN6-217ENST00000636964 A6NN06 94 aa7.49□□□□□ -1.21
CLN6-217ENST00000636964 MP68P56378 58 aa7.49□□□□□ -1.21
CLN6-217ENST00000636964 LINC01554Q52M75 96 aa7.49□□□□□ -1.21
CLN6-217ENST00000636964 LINC00575Q6W349 94 aa7.48□□□□□ -1.21
CLN6-217ENST00000636964 DNAH7Q8WXX0 4024 aa7.48□□□□□ -1.21
CLN6-217ENST00000636964 hDV103S1A0JD37 113 aa7.47□□□□□ -1.21
CLN6-217ENST00000636964 ZNF706Q9Y5V0 76 aaPredicted RBP7.47□□□□□ -1.21
CLN6-217ENST00000636964 MUC7Q8TAX7 377 aa7.47□□□□□ -1.21
CLN6-217ENST00000636964 PRYO14603 147 aa7.46□□□□□ -1.21
CLN6-217ENST00000636964 DNAH1Q9P2D7 4330 aa7.46□□□□□ -1.22
CLN6-217ENST00000636964 DNAH10Q8IVF4 4471 aa7.45□□□□□ -1.22
CLN6-217ENST00000636964 NUPR2A6NF83 97 aa7.44□□□□□ -1.22
CLN6-217ENST00000636964 PSCAO43653 123 aa7.44□□□□□ -1.22
CLN6-217ENST00000636964 CXCL6P80162 114 aa7.44□□□□□ -1.22
CLN6-217ENST00000636964 IGLV6-57P01721 117 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms