RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 KRTAP4-12Q9BQ66 201 aa5.33□□□□□ -1.56
GPC3-204ENST00000631057 DNAH10OSP0CZ25 163 aa5.33□□□□□ -1.56
GPC3-204ENST00000631057 SYCNQ0VAF6 134 aa5.33□□□□□ -1.56
GPC3-204ENST00000631057 SERP2Q8N6R1 65 aa5.33□□□□□ -1.56
GPC3-204ENST00000631057 TENM3Q9P273 2699 aa5.32□□□□□ -1.56
GPC3-204ENST00000631057 A0A087WVE0 104 aa5.32□□□□□ -1.56
GPC3-204ENST00000631057 PKD1L1Q8TDX9 2849 aa5.32□□□□□ -1.56
GPC3-204ENST00000631057 STAB1Q9NY15 2570 aa5.32□□□□□ -1.56
GPC3-204ENST00000631057 DNAH3Q8TD57 4116 aa5.31□□□□□ -1.56
GPC3-204ENST00000631057 TRAV10A0A0B4J240 114 aa5.31□□□□□ -1.56
GPC3-204ENST00000631057 CRYGAP11844 174 aa5.31□□□□□ -1.56
GPC3-204ENST00000631057 TRBV7-4A0A0J9YYF1 115 aa5.3□□□□□ -1.56
GPC3-204ENST00000631057 Q6ZRP5 223 aa5.3□□□□□ -1.56
GPC3-204ENST00000631057 NKAPP1Q8N9T2 125 aa5.3□□□□□ -1.56
GPC3-204ENST00000631057 UPK3BQ9BT76 320 aa5.29□□□□□ -1.56
GPC3-204ENST00000631057 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
GPC3-204ENST00000631057 TLX1NBP0CAT3 122 aa5.29□□□□□ -1.56
GPC3-204ENST00000631057 Q6ZVQ6 151 aa5.29□□□□□ -1.56
GPC3-204ENST00000631057 FAM19A1Q7Z5A9 133 aa5.29□□□□□ -1.56
GPC3-204ENST00000631057 RMI2Q96E14 147 aa5.29□□□□□ -1.56
GPC3-204ENST00000631057 KCNQ1DNQ9H478 68 aa5.29□□□□□ -1.56
GPC3-204ENST00000631057 BCE1O60756 84 aa5.28□□□□□ -1.56
GPC3-204ENST00000631057 LINC01547P58512 204 aaPredicted RBP5.28□□□□□ -1.56
GPC3-204ENST00000631057 CXCL6P80162 114 aa5.28□□□□□ -1.56
GPC3-204ENST00000631057 MRAPQ8TCY5 172 aa5.28□□□□□ -1.56
GPC3-204ENST00000631057 KRTAP9-9Q9BYP9 154 aa5.28□□□□□ -1.56
GPC3-204ENST00000631057 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
GPC3-204ENST00000631057 FBN1P35555 2871 aaKnown RBP5.27□□□□□ -1.57
GPC3-204ENST00000631057 M0R2N4 97 aa5.27□□□□□ -1.57
GPC3-204ENST00000631057 HAMPP81172 84 aa5.27□□□□□ -1.57
GPC3-204ENST00000631057 SMIM20Q8N5G0 67 aa5.27□□□□□ -1.57
GPC3-204ENST00000631057 IGLV5-37A0A075B6J1 123 aa5.26□□□□□ -1.57
GPC3-204ENST00000631057 C7orf33Q8WU49 177 aa5.26□□□□□ -1.57
GPC3-204ENST00000631057 LINC00588Q9Y4M8 146 aa5.26□□□□□ -1.57
GPC3-204ENST00000631057 NOTCH1P46531 2555 aa5.25□□□□□ -1.57
GPC3-204ENST00000631057 TM2D3Q9BRN9 247 aa5.25□□□□□ -1.57
GPC3-204ENST00000631057 ANK2Q01484 3957 aa5.25□□□□□ -1.57
GPC3-204ENST00000631057 TMEM258P61165 79 aa5.25□□□□□ -1.57
GPC3-204ENST00000631057 DHRS4-AS1Q9P1J3 65 aa5.25□□□□□ -1.57
GPC3-204ENST00000631057 TRAV7A0A075B6U4 112 aa5.23□□□□□ -1.57
GPC3-204ENST00000631057 ETDCA0A1B0GVM5 59 aa5.23□□□□□ -1.57
GPC3-204ENST00000631057 COL6A5A8TX70 2615 aa5.23□□□□□ -1.57
GPC3-204ENST00000631057 KRTAP21-3Q3LHN1 58 aa5.23□□□□□ -1.57
GPC3-204ENST00000631057 Q6ZRX8 168 aa5.23□□□□□ -1.57
GPC3-204ENST00000631057 LOC107984640A0A0U1RRK4 108 aa5.22□□□□□ -1.57
GPC3-204ENST00000631057 HUWE1Q7Z6Z7 4374 aaKnown RBP5.21□□□□□ -1.57
GPC3-204ENST00000631057 IGLV1-50A0A075B6I6 118 aa5.21□□□□□ -1.57
GPC3-204ENST00000631057 J3KT08 172 aa5.21□□□□□ -1.57
GPC3-204ENST00000631057 K7EIL1 84 aa5.21□□□□□ -1.57
GPC3-204ENST00000631057 SPRR1AP35321 89 aa5.21□□□□□ -1.57
GPC3-204ENST00000631057 CASC10Q5T4H9 136 aa5.21□□□□□ -1.57
GPC3-204ENST00000631057 Q8N377 158 aa5.21□□□□□ -1.57
GPC3-204ENST00000631057 CYSTM1Q9H1C7 97 aa5.21□□□□□ -1.57
GPC3-204ENST00000631057 DNAH1Q9P2D7 4330 aa5.21□□□□□ -1.58
GPC3-204ENST00000631057 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.58
GPC3-204ENST00000631057 KRTAP4-16G5E9R7 235 aaPredicted RBP5.21□□□□□ -1.58
GPC3-204ENST00000631057 IGLV5-48A0A075B6I7 105 aa5.2□□□□□ -1.58
GPC3-204ENST00000631057 A0A1B0GW54 56 aa5.2□□□□□ -1.58
GPC3-204ENST00000631057 FAM168BA1KXE4 195 aa5.2□□□□□ -1.58
GPC3-204ENST00000631057 RPL37AP8A6NKH3 93 aa5.2□□□□□ -1.58
GPC3-204ENST00000631057 PRB2P02812 416 aaPredicted RBP5.2□□□□□ -1.58
GPC3-204ENST00000631057 RPS28P62857 69 aaKnown RBP5.2□□□□□ -1.58
GPC3-204ENST00000631057 SCXQ7RTU7 201 aa5.2□□□□□ -1.58
GPC3-204ENST00000631057 MRPL55Q7Z7F7 128 aaKnown RBP5.2□□□□□ -1.58
GPC3-204ENST00000631057 DEFB105AQ8NG35 78 aa5.2□□□□□ -1.58
GPC3-204ENST00000631057 NREPQ16612 68 aa5.19□□□□□ -1.58
GPC3-204ENST00000631057 Q9BRP9 147 aa5.19□□□□□ -1.58
GPC3-204ENST00000631057 NBEAL1Q6ZS30 2694 aa5.19□□□□□ -1.58
GPC3-204ENST00000631057 FUSP35637 526 aaKnown RBP eCLIP5.18□□□□□ -1.582e-6■■□□□ 12
GPC3-204ENST00000631057 FAM19A5Q7Z5A7 132 aaPredicted RBP5.18□□□□□ -1.58
GPC3-204ENST00000631057 KRTAP7-1Q8IUC3 87 aa5.18□□□□□ -1.58
GPC3-204ENST00000631057 C20orf197Q8N268 126 aa5.18□□□□□ -1.58
GPC3-204ENST00000631057 BPY2O14599 106 aa5.16□□□□□ -1.58
GPC3-204ENST00000631057 REG3GQ6UW15 175 aa5.16□□□□□ -1.58
GPC3-204ENST00000631057 DPH3Q96FX2 82 aa5.16□□□□□ -1.58
GPC3-204ENST00000631057 C3orf84H3BNL1 204 aa5.16□□□□□ -1.58
GPC3-204ENST00000631057 IGKV4-1P06312 121 aa5.16□□□□□ -1.58
GPC3-204ENST00000631057 UBE2BP63146 152 aa5.16□□□□□ -1.58
GPC3-204ENST00000631057 C1orf137Q5JT78 98 aa5.16□□□□□ -1.58
GPC3-204ENST00000631057 CNBPP62633 177 aaKnown RBP5.15□□□□□ -1.59
GPC3-204ENST00000631057 KLKP1Q107X0 134 aa5.15□□□□□ -1.59
GPC3-204ENST00000631057 ST20-AS1Q8NBB2 130 aa5.15□□□□□ -1.59
GPC3-204ENST00000631057 Q8NBF4 154 aa5.15□□□□□ -1.59
GPC3-204ENST00000631057 A0A1W2PNM2 257 aa5.14□□□□□ -1.59
GPC3-204ENST00000631057 C16orf90A8MZG2 172 aa5.14□□□□□ -1.59
GPC3-204ENST00000631057 C14orf177Q52M58 125 aa5.14□□□□□ -1.59
GPC3-204ENST00000631057 KRTAP19-1Q8IUB9 90 aa5.14□□□□□ -1.59
GPC3-204ENST00000631057 PSCAO43653 123 aa5.13□□□□□ -1.59
GPC3-204ENST00000631057 ERC2-IT1O76042 136 aa5.13□□□□□ -1.59
GPC3-204ENST00000631057 UBE2DNLQ8IWF7 75 aa5.13□□□□□ -1.59
GPC3-204ENST00000631057 A0A096LNI7 61 aa5.12□□□□□ -1.59
GPC3-204ENST00000631057 FAM236DA0A1B0GTK5 79 aa5.12□□□□□ -1.59
GPC3-204ENST00000631057 F8WEM9 126 aa5.12□□□□□ -1.59
GPC3-204ENST00000631057 H7BZZ5 65 aa5.12□□□□□ -1.59
GPC3-204ENST00000631057 NDUFC1O43677 76 aa5.12□□□□□ -1.59
GPC3-204ENST00000631057 FAM236CP0DP71 79 aa5.12□□□□□ -1.59
GPC3-204ENST00000631057 Q75L30 129 aa5.12□□□□□ -1.59
GPC3-204ENST00000631057 SPRR4Q96PI1 79 aa5.12□□□□□ -1.59
GPC3-204ENST00000631057 DNHD1Q96M86 4753 aa5.12□□□□□ -1.59
GPC3-204ENST00000631057 MGAM2Q2M2H8 2515 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms