RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.21□□□□□ -0.46
PSPC1-206ENST00000619300 H3BQ85 93 aa12.21□□□□□ -0.46
PSPC1-206ENST00000619300 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.21□□□□□ -0.46
PSPC1-206ENST00000619300 IGLV1-50A0A075B6I6 118 aa12.2□□□□□ -0.46
PSPC1-206ENST00000619300 C16orf90A8MZG2 172 aa12.2□□□□□ -0.46
PSPC1-206ENST00000619300 GAGE2AQ6NT46 116 aa12.2□□□□□ -0.46
PSPC1-206ENST00000619300 FAM19A5Q7Z5A7 132 aaPredicted RBP12.2□□□□□ -0.46
PSPC1-206ENST00000619300 STARD9Q9P2P6 4700 aa12.2□□□□□ -0.46
PSPC1-206ENST00000619300 RPL37AP8A6NKH3 93 aa12.2□□□□□ -0.46
PSPC1-206ENST00000619300 A0A096LNI7 61 aa12.19□□□□□ -0.46
PSPC1-206ENST00000619300 TRBV7-7A0A0K0K1E9 115 aa12.19□□□□□ -0.46
PSPC1-206ENST00000619300 M0R2N4 97 aa12.19□□□□□ -0.46
PSPC1-206ENST00000619300 MRPL55Q7Z7F7 128 aaKnown RBP12.19□□□□□ -0.46
PSPC1-206ENST00000619300 PRYO14603 147 aa12.17□□□□□ -0.46
PSPC1-206ENST00000619300 GHRHP01286 108 aa12.16□□□□□ -0.46
PSPC1-206ENST00000619300 IMUPQ9GZP8 106 aa12.16□□□□□ -0.46
PSPC1-206ENST00000619300 VPS13DQ5THJ4 4388 aa12.16□□□□□ -0.46
PSPC1-206ENST00000619300 IGKV2-24A0A0C4DH68 120 aa12.15□□□□□ -0.46
PSPC1-206ENST00000619300 SPRR1AP35321 89 aa12.15□□□□□ -0.47
PSPC1-206ENST00000619300 SVIPQ8NHG7 77 aa12.15□□□□□ -0.47
PSPC1-206ENST00000619300 LAMTOR3Q9UHA4 124 aa12.15□□□□□ -0.47
PSPC1-206ENST00000619300 KRTAP4-16G5E9R7 235 aaPredicted RBP12.14□□□□□ -0.47
PSPC1-206ENST00000619300 C9orf163Q8N9P6 203 aa12.14□□□□□ -0.47
PSPC1-206ENST00000619300 FBN3Q75N90 2809 aa12.13□□□□□ -0.47
PSPC1-206ENST00000619300 CCKP06307 115 aa12.13□□□□□ -0.47
PSPC1-206ENST00000619300 SDIM1Q6ZPB5 146 aa12.13□□□□□ -0.47
PSPC1-206ENST00000619300 A0A1W2PNN7 141 aa12.12□□□□□ -0.47
PSPC1-206ENST00000619300 RBM3P98179 157 aaKnown RBP12.12□□□□□ -0.47
PSPC1-206ENST00000619300 B5MCH6 92 aa12.11□□□□□ -0.47
PSPC1-206ENST00000619300 Q6ZRX8 168 aa12.11□□□□□ -0.47
PSPC1-206ENST00000619300 SMCR5Q8TEV8 140 aa12.11□□□□□ -0.47
PSPC1-206ENST00000619300 ETDCA0A1B0GVM5 59 aa12.1□□□□□ -0.47
PSPC1-206ENST00000619300 Q6ZR54 194 aa12.1□□□□□ -0.47
PSPC1-206ENST00000619300 DHRS4-AS1Q9P1J3 65 aa12.1□□□□□ -0.47
PSPC1-206ENST00000619300 PKIGQ9Y2B9 76 aa12.1□□□□□ -0.47
PSPC1-206ENST00000619300 LINC00643Q86TS7 51 aa12.08□□□□□ -0.48
PSPC1-206ENST00000619300 CHTF8P0CG12 524 aa12.07□□□□□ -0.48
PSPC1-206ENST00000619300 REG3GQ6UW15 175 aa12.07□□□□□ -0.48
PSPC1-206ENST00000619300 Q9BRP9 147 aa12.06□□□□□ -0.48
PSPC1-206ENST00000619300 A0A087WTM6 91 aa12.06□□□□□ -0.48
PSPC1-206ENST00000619300 LOC110117498A0A087WWA1 95 aa12.06□□□□□ -0.48
PSPC1-206ENST00000619300 CCDC179H3BU77 68 aa12.06□□□□□ -0.48
PSPC1-206ENST00000619300 LINC00846Q9NV44 126 aa12.05□□□□□ -0.48
PSPC1-206ENST00000619300 Q6ZQT0 140 aa12.04□□□□□ -0.48
PSPC1-206ENST00000619300 DSCR8Q96T75 97 aa12.04□□□□□ -0.48
PSPC1-206ENST00000619300 SS18L2Q9UHA2 77 aa12.04□□□□□ -0.48
PSPC1-206ENST00000619300 LINC00474Q9P2X8 69 aa12.04□□□□□ -0.48
PSPC1-206ENST00000619300 PDE6GP18545 87 aa12.02□□□□□ -0.49
PSPC1-206ENST00000619300 WWC2-AS2Q96NR7 200 aa12.01□□□□□ -0.49
PSPC1-206ENST00000619300 DEFB105AQ8NG35 78 aa12.01□□□□□ -0.49
PSPC1-206ENST00000619300 LY6G6CO95867 125 aa12□□□□□ -0.49
PSPC1-206ENST00000619300 Q8N377 158 aa12□□□□□ -0.49
PSPC1-206ENST00000619300 TRBV7-4A0A0J9YYF1 115 aa11.99□□□□□ -0.49
PSPC1-206ENST00000619300 LINC01547P58512 204 aaPredicted RBP11.99□□□□□ -0.49
PSPC1-206ENST00000619300 UBE2BP63146 152 aa11.99□□□□□ -0.49
PSPC1-206ENST00000619300 C1orf134Q5TEV5 83 aa11.99□□□□□ -0.49
PSPC1-206ENST00000619300 PHF5AQ7RTV0 110 aaKnown RBP11.99□□□□□ -0.49
PSPC1-206ENST00000619300 ERC2-IT1O76042 136 aa11.97□□□□□ -0.49
PSPC1-206ENST00000619300 TGP01266 2768 aa11.97□□□□□ -0.49
PSPC1-206ENST00000619300 PANO1I0J062 215 aa11.96□□□□□ -0.49
PSPC1-206ENST00000619300 ST20-AS1Q8NBB2 130 aa11.96□□□□□ -0.5
PSPC1-206ENST00000619300 KMT2AQ03164 3969 aa11.96□□□□□ -0.5
PSPC1-206ENST00000619300 IGLV5-48A0A075B6I7 105 aa11.95□□□□□ -0.5
PSPC1-206ENST00000619300 FAM19A1Q7Z5A9 133 aa11.95□□□□□ -0.5
PSPC1-206ENST00000619300 DPH3Q96FX2 82 aa11.95□□□□□ -0.5
PSPC1-206ENST00000619300 FAM236AA0A1B0GUQ0 79 aa11.94□□□□□ -0.5
PSPC1-206ENST00000619300 FAM236BA0A1B0GV22 79 aa11.94□□□□□ -0.5
PSPC1-206ENST00000619300 LINC00476Q8WZB0 136 aa11.94□□□□□ -0.5
PSPC1-206ENST00000619300 KRTAP11-1Q8IUC1 163 aa11.94□□□□□ -0.5
PSPC1-206ENST00000619300 RTL8CO15255 209 aa11.93□□□□□ -0.5
PSPC1-206ENST00000619300 Q6JHZ5 121 aa11.93□□□□□ -0.5
PSPC1-206ENST00000619300 SPACA4Q8TDM5 124 aa11.93□□□□□ -0.5
PSPC1-206ENST00000619300 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.92□□□□□ -0.5
PSPC1-206ENST00000619300 FUSP35637 526 aaKnown RBP eCLIP11.91□□□□□ -0.5
PSPC1-206ENST00000619300 PRLHP81277 87 aa11.91□□□□□ -0.5
PSPC1-206ENST00000619300 UBL5Q9BZL1 73 aa11.91□□□□□ -0.5
PSPC1-206ENST00000619300 EPM2AB3EWF7 344 aa11.9□□□□□ -0.5
PSPC1-206ENST00000619300 DNAH2Q9P225 4427 aa11.89□□□□□ -0.51
PSPC1-206ENST00000619300 IGKV3D-7A0A0C4DH55 119 aa11.89□□□□□ -0.51
PSPC1-206ENST00000619300 HIST1H4AP62805 103 aaKnown RBP11.89□□□□□ -0.51
PSPC1-206ENST00000619300 C3orf22Q8N5N4 141 aa11.89□□□□□ -0.51
PSPC1-206ENST00000619300 UQCRQO14949 82 aa11.88□□□□□ -0.51
PSPC1-206ENST00000619300 H0Y9J4 135 aa11.87□□□□□ -0.51
PSPC1-206ENST00000619300 C3orf84H3BNL1 204 aa11.86□□□□□ -0.51
PSPC1-206ENST00000619300 HIGD2AQ9BW72 106 aa11.86□□□□□ -0.51
PSPC1-206ENST00000619300 IGLV5-52A0A0A0MRZ9 124 aa11.85□□□□□ -0.51
PSPC1-206ENST00000619300 TNP2Q05952 138 aa11.84□□□□□ -0.51
PSPC1-206ENST00000619300 ATP5EP2Q5VTU8 51 aa11.84□□□□□ -0.51
PSPC1-206ENST00000619300 HECTD4Q9Y4D8 3996 aa11.84□□□□□ -0.51
PSPC1-206ENST00000619300 ATOX1O00244 68 aa11.83□□□□□ -0.52
PSPC1-206ENST00000619300 SMIM29Q86T20 159 aa11.82□□□□□ -0.52
PSPC1-206ENST00000619300 Q6ZVQ6 151 aa11.82□□□□□ -0.52
PSPC1-206ENST00000619300 BCE1O60756 84 aa11.81□□□□□ -0.52
PSPC1-206ENST00000619300 UBE2AP49459 152 aa11.81□□□□□ -0.52
PSPC1-206ENST00000619300 COX7CP15954 63 aa11.81□□□□□ -0.52
PSPC1-206ENST00000619300 C9orf153Q5TBE3 101 aa11.81□□□□□ -0.52
PSPC1-206ENST00000619300 DNAH6Q9C0G6 4158 aa11.8□□□□□ -0.52
PSPC1-206ENST00000619300 DNAH17Q9UFH2 4485 aa11.8□□□□□ -0.52
PSPC1-206ENST00000619300 C1orf137Q5JT78 98 aa11.79□□□□□ -0.52
PSPC1-206ENST00000619300 PLAC8Q9NZF1 115 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms