RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 HMGA1P17096 107 aaKnown RBP0.77□□□□□ -2.29
RFC3-203ENST00000616236 HEPN1Q6WQI6 88 aa0.77□□□□□ -2.29
RFC3-203ENST00000616236 U3KQA8 63 aa0.77□□□□□ -2.29
RFC3-203ENST00000616236 NESP48681 1621 aa0.77□□□□□ -2.29
RFC3-203ENST00000616236 NAV2Q8IVL1 2488 aa0.77□□□□□ -2.29
RFC3-203ENST00000616236 LCE6AA0A183 80 aa0.76□□□□□ -2.29
RFC3-203ENST00000616236 SPINK4O60575 86 aa0.76□□□□□ -2.29
RFC3-203ENST00000616236 LELP1Q5T871 98 aa0.76□□□□□ -2.29
RFC3-203ENST00000616236 VWFP04275 2813 aa0.76□□□□□ -2.29
RFC3-203ENST00000616236 MUC5BQ9HC84 5762 aaPredicted RBP0.75□□□□□ -2.29
RFC3-203ENST00000616236 NCOR1O75376 2440 aa0.75□□□□□ -2.29
RFC3-203ENST00000616236 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
RFC3-203ENST00000616236 DUOX2Q9NRD8 1548 aa0.74□□□□□ -2.29
RFC3-203ENST00000616236 H3BVH4 76 aa0.74□□□□□ -2.29
RFC3-203ENST00000616236 PARP4Q9UKK3 1724 aaKnown RBP0.74□□□□□ -2.29
RFC3-203ENST00000616236 ZC3H13Q5T200 1668 aaKnown RBP0.74□□□□□ -2.29
RFC3-203ENST00000616236 EIF2AK4Q9P2K8 1649 aaKnown RBP0.74□□□□□ -2.29
RFC3-203ENST00000616236 AHNAK2Q8IVF2 5795 aa0.74□□□□□ -2.29
RFC3-203ENST00000616236 CHD6Q8TD26 2715 aa0.73□□□□□ -2.29
RFC3-203ENST00000616236 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
RFC3-203ENST00000616236 ITSN1Q15811 1721 aa0.72□□□□□ -2.29
RFC3-203ENST00000616236 NDUFA4O00483 81 aa0.72□□□□□ -2.29
RFC3-203ENST00000616236 CDKN2A-AS1Q9UH64 79 aa0.72□□□□□ -2.29
RFC3-203ENST00000616236 ANKRD50Q9ULJ7 1429 aa0.72□□□□□ -2.29
RFC3-203ENST00000616236 WIZO95785 1651 aa0.72□□□□□ -2.29
RFC3-203ENST00000616236 ADAMTS12P58397 1594 aa0.71□□□□□ -2.3
RFC3-203ENST00000616236 LMTK2Q8IWU2 1503 aa0.71□□□□□ -2.3
RFC3-203ENST00000616236 TENM3Q9P273 2699 aa0.71□□□□□ -2.3
RFC3-203ENST00000616236 KRTAP5-10Q6L8G5 202 aa0.71□□□□□ -2.3
RFC3-203ENST00000616236 DDX60LQ5H9U9 1706 aaKnown RBP0.71□□□□□ -2.3
RFC3-203ENST00000616236 SYNE2Q8WXH0 6885 aaKnown RBP0.71□□□□□ -2.3
RFC3-203ENST00000616236 TENM4Q6N022 2769 aa0.7□□□□□ -2.3
RFC3-203ENST00000616236 CDC42BPGQ6DT37 1551 aa0.7□□□□□ -2.3
RFC3-203ENST00000616236 PCLOQ9Y6V0 5065 aa0.7□□□□□ -2.3
RFC3-203ENST00000616236 C4AP0C0L4 1744 aa0.69□□□□□ -2.3
RFC3-203ENST00000616236 C4BP0C0L5 1744 aa0.69□□□□□ -2.3
RFC3-203ENST00000616236 CSPG4Q6UVK1 2322 aa0.69□□□□□ -2.3
RFC3-203ENST00000616236 CICQ96RK0 1608 aaPredicted RBP0.69□□□□□ -2.3
RFC3-203ENST00000616236 NDUFA3O95167 84 aa0.69□□□□□ -2.3
RFC3-203ENST00000616236 COX6B2Q6YFQ2 88 aa0.69□□□□□ -2.3
RFC3-203ENST00000616236 HILPDAQ9Y5L2 63 aa0.69□□□□□ -2.3
RFC3-203ENST00000616236 DSTQ03001 7570 aaKnown RBP0.69□□□□□ -2.3
RFC3-203ENST00000616236 NEBP20929 6669 aa0.68□□□□□ -2.3
RFC3-203ENST00000616236 WFDC13Q8IUB5 93 aa0.68□□□□□ -2.3
RFC3-203ENST00000616236 ABCA9Q8IUA7 1624 aa0.67□□□□□ -2.3
RFC3-203ENST00000616236 LRP1Q07954 4544 aaKnown RBP0.67□□□□□ -2.3
RFC3-203ENST00000616236 ASXL1Q8IXJ9 1541 aa0.67□□□□□ -2.3
RFC3-203ENST00000616236 WNK2Q9Y3S1 2297 aa0.67□□□□□ -2.3
RFC3-203ENST00000616236 ATRQ13535 2644 aa0.67□□□□□ -2.3
RFC3-203ENST00000616236 NRAPQ86VF7 1730 aa0.67□□□□□ -2.3
RFC3-203ENST00000616236 KIAA1109Q2LD37 5005 aa0.66□□□□□ -2.3
RFC3-203ENST00000616236 SPTA1P02549 2419 aa0.66□□□□□ -2.3
RFC3-203ENST00000616236 MROH1Q8NDA8 1641 aa0.65□□□□□ -2.31
RFC3-203ENST00000616236 MADDQ8WXG6 1647 aa0.65□□□□□ -2.31
RFC3-203ENST00000616236 DIP2AQ14689 1571 aa0.65□□□□□ -2.31
RFC3-203ENST00000616236 TJP1Q07157 1748 aa0.64□□□□□ -2.31
RFC3-203ENST00000616236 MUC2Q02817 5179 aa0.64□□□□□ -2.31
RFC3-203ENST00000616236 BSNQ9UPA5 3926 aa0.64□□□□□ -2.31
RFC3-203ENST00000616236 FSIP2Q5CZC0 6907 aa0.63□□□□□ -2.31
RFC3-203ENST00000616236 SYNE1Q8NF91 8797 aaKnown RBP0.63□□□□□ -2.31
RFC3-203ENST00000616236 REV3LO60673 3130 aa0.62□□□□□ -2.31
RFC3-203ENST00000616236 NCOR2Q9Y618 2525 aa0.62□□□□□ -2.31
RFC3-203ENST00000616236 KNL1Q8NG31 2342 aa0.62□□□□□ -2.31
RFC3-203ENST00000616236 FAT2Q9NYQ8 4349 aa0.62□□□□□ -2.31
RFC3-203ENST00000616236 UBR5O95071 2799 aaPredicted RBP0.61□□□□□ -2.31
RFC3-203ENST00000616236 ATXN8Q156A1 80 aa0.61□□□□□ -2.31
RFC3-203ENST00000616236 ENHOQ6UWT2 76 aa0.61□□□□□ -2.31
RFC3-203ENST00000616236 NHSQ6T4R5 1651 aa0.61□□□□□ -2.31
RFC3-203ENST00000616236 CELSR1Q9NYQ6 3014 aa0.61□□□□□ -2.31
RFC3-203ENST00000616236 RALGAPBQ86X10 1494 aa0.61□□□□□ -2.31
RFC3-203ENST00000616236 PKD1L1Q8TDX9 2849 aa0.6□□□□□ -2.31
RFC3-203ENST00000616236 LOC730098B7Z3J9 87 aa0.6□□□□□ -2.31
RFC3-203ENST00000616236 GNG13Q9P2W3 67 aa0.6□□□□□ -2.31
RFC3-203ENST00000616236 HUWE1Q7Z6Z7 4374 aaKnown RBP0.6□□□□□ -2.31
RFC3-203ENST00000616236 TNXBP22105 4242 aa0.59□□□□□ -2.31
RFC3-203ENST00000616236 PRO3102Q9H379 93 aa0.59□□□□□ -2.31
RFC3-203ENST00000616236 PRKDCP78527 4128 aaKnown RBP0.59□□□□□ -2.32
RFC3-203ENST00000616236 MUC5ACP98088 5654 aa0.59□□□□□ -2.32
RFC3-203ENST00000616236 KMT2DO14686 5537 aa0.59□□□□□ -2.32
RFC3-203ENST00000616236 EFCAB5A4FU69 1503 aa0.59□□□□□ -2.32
RFC3-203ENST00000616236 HFM1A2PYH4 1435 aa0.58□□□□□ -2.32
RFC3-203ENST00000616236 ABCA2Q9BZC7 2435 aa0.58□□□□□ -2.32
RFC3-203ENST00000616236 PTPN13Q12923 2485 aa0.58□□□□□ -2.32
RFC3-203ENST00000616236 FAT4Q6V0I7 4981 aa0.58□□□□□ -2.32
RFC3-203ENST00000616236 IGSF10Q6WRI0 2623 aa0.56□□□□□ -2.32
RFC3-203ENST00000616236 PRM1P04553 51 aa0.56□□□□□ -2.32
RFC3-203ENST00000616236 LINC00158P58513 81 aa0.56□□□□□ -2.32
RFC3-203ENST00000616236 INO80Q9ULG1 1556 aaPredicted RBP0.56□□□□□ -2.32
RFC3-203ENST00000616236 RNF17Q9BXT8 1623 aaKnown RBP0.56□□□□□ -2.32
RFC3-203ENST00000616236 KMT2AQ03164 3969 aa0.55□□□□□ -2.32
RFC3-203ENST00000616236 C3orf79P0CE67 100 aa0.55□□□□□ -2.32
RFC3-203ENST00000616236 KRTAP20-1Q3LI63 56 aa0.55□□□□□ -2.32
RFC3-203ENST00000616236 UBL5Q9BZL1 73 aa0.55□□□□□ -2.32
RFC3-203ENST00000616236 HIVEP3Q5T1R4 2406 aa0.55□□□□□ -2.32
RFC3-203ENST00000616236 HRNRQ86YZ3 2850 aaPredicted RBP0.55□□□□□ -2.32
RFC3-203ENST00000616236 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
RFC3-203ENST00000616236 SMIM31A0A1B0GVY4 71 aa0.54□□□□□ -2.32
RFC3-203ENST00000616236 KCNQ1DNQ9H478 68 aa0.54□□□□□ -2.32
RFC3-203ENST00000616236 MAST4O15021 2626 aa0.54□□□□□ -2.32
RFC3-203ENST00000616236 TEP1Q99973 2627 aaKnown RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms