RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 A8MU10 97 aa10.75□□□□□ -0.69
RTN1-209ENST00000611068 PSPHP1O15172 72 aa10.75□□□□□ -0.69
RTN1-209ENST00000611068 LAMTOR3Q9UHA4 124 aa10.74□□□□□ -0.69
RTN1-209ENST00000611068 LOC110117498A0A087WWA1 95 aa10.73□□□□□ -0.69
RTN1-209ENST00000611068 Q8N9L7 120 aa10.72□□□□□ -0.69
RTN1-209ENST00000611068 HIGD2AQ9BW72 106 aa10.72□□□□□ -0.69
RTN1-209ENST00000611068 C11orf45Q8TAV5 145 aa10.72□□□□□ -0.69
RTN1-209ENST00000611068 IGLV10-54A0A075B6I4 117 aa10.71□□□□□ -0.69
RTN1-209ENST00000611068 hDV103S1A0JD37 113 aa10.71□□□□□ -0.7
RTN1-209ENST00000611068 KPRPQ5T749 579 aaPredicted RBP10.7□□□□□ -0.7
RTN1-209ENST00000611068 LINC00269Q8N2A0 174 aa10.7□□□□□ -0.7
RTN1-209ENST00000611068 ANGP03950 147 aaKnown RBP10.69□□□□□ -0.7
RTN1-209ENST00000611068 C6orf99Q4VX62 202 aa10.69□□□□□ -0.7
RTN1-209ENST00000611068 STAB2Q8WWQ8 2551 aa10.69□□□□□ -0.7
RTN1-209ENST00000611068 DEFB131BA0A096LNP1 70 aa10.69□□□□□ -0.7
RTN1-209ENST00000611068 ZNF561-AS1K7EIQ3 104 aa10.69□□□□□ -0.7
RTN1-209ENST00000611068 ERC2-IT1O76042 136 aa10.69□□□□□ -0.7
RTN1-209ENST00000611068 CD164L2Q6UWJ8 174 aa10.69□□□□□ -0.7
RTN1-209ENST00000611068 Q1T7F1 81 aa10.68□□□□□ -0.7
RTN1-209ENST00000611068 OCR1Q9BZK8 76 aa10.67□□□□□ -0.7
RTN1-209ENST00000611068 HUWE1Q7Z6Z7 4374 aaKnown RBP10.67□□□□□ -0.7
RTN1-209ENST00000611068 LINC00959A0A1B0GUT2 108 aa10.66□□□□□ -0.7
RTN1-209ENST00000611068 DNHD1Q96M86 4753 aa10.65□□□□□ -0.7
RTN1-209ENST00000611068 IGHV3OR16-9A0A0B4J2B5 98 aa10.65□□□□□ -0.7
RTN1-209ENST00000611068 LINC00575Q6W349 94 aa10.65□□□□□ -0.7
RTN1-209ENST00000611068 MRPL55Q7Z7F7 128 aaKnown RBP10.65□□□□□ -0.7
RTN1-209ENST00000611068 RBM12B-AS1Q9P1G2 102 aa10.65□□□□□ -0.71
RTN1-209ENST00000611068 TRAV22A0A0B4J277 110 aa10.64□□□□□ -0.71
RTN1-209ENST00000611068 C1orf64Q8NEQ6 169 aa10.64□□□□□ -0.71
RTN1-209ENST00000611068 WFDC10BQ8IUB3 73 aa10.64□□□□□ -0.71
RTN1-209ENST00000611068 MUC7Q8TAX7 377 aa10.64□□□□□ -0.71
RTN1-209ENST00000611068 KLK12Q9UKR0 248 aa10.64□□□□□ -0.71
RTN1-209ENST00000611068 Q8NDZ9 215 aa10.62□□□□□ -0.71
RTN1-209ENST00000611068 REG3AQ06141 175 aa10.61□□□□□ -0.71
RTN1-209ENST00000611068 LELP1Q5T871 98 aa10.61□□□□□ -0.71
RTN1-209ENST00000611068 A0A1B0GUV1 79 aa10.61□□□□□ -0.71
RTN1-209ENST00000611068 TENM2Q9NT68 2774 aa10.6□□□□□ -0.71
RTN1-209ENST00000611068 IGKV4-1P06312 121 aa10.59□□□□□ -0.71
RTN1-209ENST00000611068 Q6ZQY7 126 aa10.59□□□□□ -0.71
RTN1-209ENST00000611068 A8MUN3 132 aa10.59□□□□□ -0.71
RTN1-209ENST00000611068 CHCHD10Q8WYQ3 142 aaPredicted RBP10.58□□□□□ -0.72
RTN1-209ENST00000611068 MEGF8Q7Z7M0 2845 aa10.58□□□□□ -0.72
RTN1-209ENST00000611068 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.57□□□□□ -0.72
RTN1-209ENST00000611068 SYCNQ0VAF6 134 aa10.57□□□□□ -0.72
RTN1-209ENST00000611068 LYSTQ99698 3801 aa10.56□□□□□ -0.72
RTN1-209ENST00000611068 PRR4Q16378 134 aa10.55□□□□□ -0.72
RTN1-209ENST00000611068 PDE6GP18545 87 aa10.54□□□□□ -0.72
RTN1-209ENST00000611068 KTN1-AS1Q86SY8 53 aa10.54□□□□□ -0.72
RTN1-209ENST00000611068 LINC00588Q9Y4M8 146 aa10.54□□□□□ -0.72
RTN1-209ENST00000611068 FAM30AQ9NZY2 134 aa10.54□□□□□ -0.72
RTN1-209ENST00000611068 C10orf25Q5T742 122 aa10.54□□□□□ -0.72
RTN1-209ENST00000611068 C9orf116Q5BN46 136 aaPredicted RBP10.53□□□□□ -0.72
RTN1-209ENST00000611068 DNAH9Q9NYC9 4486 aa10.53□□□□□ -0.72
RTN1-209ENST00000611068 C4orf48Q5BLP8 95 aa10.53□□□□□ -0.72
RTN1-209ENST00000611068 H3BNG1 76 aa10.51□□□□□ -0.73
RTN1-209ENST00000611068 Q5VV11 94 aa10.5□□□□□ -0.73
RTN1-209ENST00000611068 M0R378 163 aa10.49□□□□□ -0.73
RTN1-209ENST00000611068 PSCAO43653 123 aa10.49□□□□□ -0.73
RTN1-209ENST00000611068 PRKDCP78527 4128 aaKnown RBP10.49□□□□□ -0.73
RTN1-209ENST00000611068 SMIM29Q86T20 159 aa10.48□□□□□ -0.73
RTN1-209ENST00000611068 C16orf90A8MZG2 172 aa10.47□□□□□ -0.73
RTN1-209ENST00000611068 SPTSSBQ8NFR3 76 aa10.47□□□□□ -0.73
RTN1-209ENST00000611068 CSMD3Q7Z407 3707 aa10.47□□□□□ -0.73
RTN1-209ENST00000611068 UBE2BP63146 152 aa10.46□□□□□ -0.73
RTN1-209ENST00000611068 B9D2Q9BPU9 175 aa10.46□□□□□ -0.73
RTN1-209ENST00000611068 PRR34Q9NV39 138 aa10.46□□□□□ -0.73
RTN1-209ENST00000611068 Q8IZM0 81 aa10.46□□□□□ -0.74
RTN1-209ENST00000611068 HIGD2BQ4VC39 106 aa10.45□□□□□ -0.74
RTN1-209ENST00000611068 IGKV2D-24A0A075B6R9 120 aa10.43□□□□□ -0.74
RTN1-209ENST00000611068 COX7BP24311 80 aa10.42□□□□□ -0.74
RTN1-209ENST00000611068 KIAA0087Q14695 138 aa10.42□□□□□ -0.74
RTN1-209ENST00000611068 ZCCHC13Q8WW36 166 aaKnown RBP10.42□□□□□ -0.74
RTN1-209ENST00000611068 TGP01266 2768 aa10.42□□□□□ -0.74
RTN1-209ENST00000611068 CHKB-CPT1BH3BT56 60 aa10.42□□□□□ -0.74
RTN1-209ENST00000611068 UNQ6190/PRO20217Q6UXQ8 127 aa10.42□□□□□ -0.74
RTN1-209ENST00000611068 LCE6AA0A183 80 aa10.41□□□□□ -0.74
RTN1-209ENST00000611068 C3orf84H3BNL1 204 aa10.41□□□□□ -0.74
RTN1-209ENST00000611068 SPAG11BQ08648 103 aa10.4□□□□□ -0.74
RTN1-209ENST00000611068 LINC01556Q5JQF7 62 aa10.39□□□□□ -0.75
RTN1-209ENST00000611068 DNAH7Q8WXX0 4024 aa10.38□□□□□ -0.75
RTN1-209ENST00000611068 IGLV6-57P01721 117 aa10.38□□□□□ -0.75
RTN1-209ENST00000611068 HCG22E2RYF7 251 aa10.37□□□□□ -0.75
RTN1-209ENST00000611068 CASC10Q5T4H9 136 aa10.37□□□□□ -0.75
RTN1-209ENST00000611068 LCA10Q71F78 164 aa10.37□□□□□ -0.75
RTN1-209ENST00000611068 DIRC1Q969H9 104 aa10.37□□□□□ -0.75
RTN1-209ENST00000611068 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.37□□□□□ -0.75
RTN1-209ENST00000611068 UBE2AP49459 152 aa10.37□□□□□ -0.75
RTN1-209ENST00000611068 CYP4F30PQ9H0H9 118 aa10.37□□□□□ -0.75
RTN1-209ENST00000611068 COX17Q14061 63 aa10.37□□□□□ -0.75
RTN1-209ENST00000611068 KRTAP26-1Q6PEX3 210 aa10.36□□□□□ -0.75
RTN1-209ENST00000611068 ST20-AS1Q8NBB2 130 aa10.36□□□□□ -0.75
RTN1-209ENST00000611068 A6NN06 94 aa10.35□□□□□ -0.75
RTN1-209ENST00000611068 DNAH10OSP0CZ25 163 aa10.35□□□□□ -0.75
RTN1-209ENST00000611068 ZNF73O43830 326 aaPredicted RBP10.35□□□□□ -0.75
RTN1-209ENST00000611068 FBN3Q75N90 2809 aa10.34□□□□□ -0.75
RTN1-209ENST00000611068 UBE2DNLQ8IWF7 75 aa10.34□□□□□ -0.75
RTN1-209ENST00000611068 H3BQ85 93 aa10.33□□□□□ -0.76
RTN1-209ENST00000611068 PRR15LQ9BU68 103 aa10.32□□□□□ -0.76
RTN1-209ENST00000611068 C15orf56Q8N910 161 aa10.32□□□□□ -0.76
RTN1-209ENST00000611068 Q8N9P0 234 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms