RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 NDUFC2-KCTD14E9PQ53 114 aa7.62□□□□□ -1.19
VRK3-223ENST00000601341 ATOX1O00244 68 aa7.62□□□□□ -1.19
VRK3-223ENST00000601341 TRBV10-3A0A0K0K1G6 114 aa7.61□□□□□ -1.19
VRK3-223ENST00000601341 CCDC179H3BU77 68 aa7.61□□□□□ -1.19
VRK3-223ENST00000601341 M0R378 163 aa7.61□□□□□ -1.19
VRK3-223ENST00000601341 SYCNQ0VAF6 134 aa7.61□□□□□ -1.19
VRK3-223ENST00000601341 C14orf177Q52M58 125 aa7.61□□□□□ -1.19
VRK3-223ENST00000601341 C1orf134Q5TEV5 83 aa7.61□□□□□ -1.19
VRK3-223ENST00000601341 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.61□□□□□ -1.19
VRK3-223ENST00000601341 B5MCH6 92 aa7.61□□□□□ -1.19
VRK3-223ENST00000601341 UQCRQO14949 82 aa7.61□□□□□ -1.19
VRK3-223ENST00000601341 VPREB1P12018 145 aa7.61□□□□□ -1.19
VRK3-223ENST00000601341 RBM3P98179 157 aaKnown RBP7.61□□□□□ -1.19
VRK3-223ENST00000601341 Q6ZRU5 148 aa7.61□□□□□ -1.19
VRK3-223ENST00000601341 ZNF73O43830 326 aaPredicted RBP7.6□□□□□ -1.19
VRK3-223ENST00000601341 ELOF1P60002 83 aaKnown RBP7.6□□□□□ -1.19
VRK3-223ENST00000601341 ALMS1Q8TCU4 4167 aa7.6□□□□□ -1.19
VRK3-223ENST00000601341 KMT2AQ03164 3969 aa7.6□□□□□ -1.19
VRK3-223ENST00000601341 LRCOL1A6NCL2 159 aa7.59□□□□□ -1.19
VRK3-223ENST00000601341 Q6ZQT0 140 aa7.59□□□□□ -1.2
VRK3-223ENST00000601341 DNAH10Q8IVF4 4471 aa7.58□□□□□ -1.2
VRK3-223ENST00000601341 COX7BP24311 80 aa7.58□□□□□ -1.2
VRK3-223ENST00000601341 C3orf22Q8N5N4 141 aa7.58□□□□□ -1.2
VRK3-223ENST00000601341 UBL5Q9BZL1 73 aa7.58□□□□□ -1.2
VRK3-223ENST00000601341 Q6ZQY7 126 aa7.57□□□□□ -1.2
VRK3-223ENST00000601341 XAGE1AQ9HD64 81 aa7.57□□□□□ -1.2
VRK3-223ENST00000601341 TLX1NBP0CAT3 122 aa7.56□□□□□ -1.2
VRK3-223ENST00000601341 CNBPP62633 177 aaKnown RBP7.56□□□□□ -1.2
VRK3-223ENST00000601341 DSCR8Q96T75 97 aa7.56□□□□□ -1.2
VRK3-223ENST00000601341 LCE6AA0A183 80 aa7.56□□□□□ -1.2
VRK3-223ENST00000601341 COX7CP15954 63 aa7.56□□□□□ -1.2
VRK3-223ENST00000601341 LAMTOR3Q9UHA4 124 aa7.56□□□□□ -1.2
VRK3-223ENST00000601341 PLA2G2DQ9UNK4 145 aa7.56□□□□□ -1.2
VRK3-223ENST00000601341 DNAH6Q9C0G6 4158 aa7.55□□□□□ -1.2
VRK3-223ENST00000601341 A0A087WTM6 91 aa7.55□□□□□ -1.2
VRK3-223ENST00000601341 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.54□□□□□ -1.2
VRK3-223ENST00000601341 IGKV3D-7A0A0C4DH55 119 aa7.54□□□□□ -1.2
VRK3-223ENST00000601341 TRBV7-4A0A0J9YYF1 115 aa7.54□□□□□ -1.2
VRK3-223ENST00000601341 BCE1O60756 84 aa7.54□□□□□ -1.2
VRK3-223ENST00000601341 LINC00528Q8N1L1 170 aa7.54□□□□□ -1.2
VRK3-223ENST00000601341 DNAH2Q9P225 4427 aa7.53□□□□□ -1.2
VRK3-223ENST00000601341 CRYGAP11844 174 aa7.53□□□□□ -1.2
VRK3-223ENST00000601341 Q6ZRP5 223 aa7.52□□□□□ -1.21
VRK3-223ENST00000601341 KCNQ1DNQ9H478 68 aa7.52□□□□□ -1.21
VRK3-223ENST00000601341 C9orf153Q5TBE3 101 aa7.51□□□□□ -1.21
VRK3-223ENST00000601341 SERP2Q8N6R1 65 aa7.51□□□□□ -1.21
VRK3-223ENST00000601341 SS18L2Q9UHA2 77 aa7.51□□□□□ -1.21
VRK3-223ENST00000601341 IGLV5-37A0A075B6J1 123 aa7.51□□□□□ -1.21
VRK3-223ENST00000601341 LOC107984640A0A0U1RRK4 108 aa7.51□□□□□ -1.21
VRK3-223ENST00000601341 RTL8CO15255 209 aa7.51□□□□□ -1.21
VRK3-223ENST00000601341 CXCL6P80162 114 aa7.51□□□□□ -1.21
VRK3-223ENST00000601341 SVIPQ8NHG7 77 aa7.51□□□□□ -1.21
VRK3-223ENST00000601341 C9orf163Q8N9P6 203 aa7.5□□□□□ -1.21
VRK3-223ENST00000601341 PKIGQ9Y2B9 76 aa7.49□□□□□ -1.21
VRK3-223ENST00000601341 SACSQ9NZJ4 4579 aa7.49□□□□□ -1.21
VRK3-223ENST00000601341 TNP2Q05952 138 aa7.48□□□□□ -1.21
VRK3-223ENST00000601341 NKAPP1Q8N9T2 125 aa7.48□□□□□ -1.21
VRK3-223ENST00000601341 HYDINQ4G0P3 5121 aa7.48□□□□□ -1.21
VRK3-223ENST00000601341 A0A1B0GW54 56 aa7.48□□□□□ -1.21
VRK3-223ENST00000601341 DNAH17Q9UFH2 4485 aa7.46□□□□□ -1.21
VRK3-223ENST00000601341 C16orf90A8MZG2 172 aa7.46□□□□□ -1.21
VRK3-223ENST00000601341 Q6ZVQ6 151 aa7.46□□□□□ -1.21
VRK3-223ENST00000601341 DHRS4-AS1Q9P1J3 65 aa7.46□□□□□ -1.21
VRK3-223ENST00000601341 A0A087WVE0 104 aa7.46□□□□□ -1.22
VRK3-223ENST00000601341 PRYO14603 147 aa7.46□□□□□ -1.22
VRK3-223ENST00000601341 LINC01547P58512 204 aaPredicted RBP7.46□□□□□ -1.22
VRK3-223ENST00000601341 SMIM20Q8N5G0 67 aa7.46□□□□□ -1.22
VRK3-223ENST00000601341 IGLV5-52A0A0A0MRZ9 124 aa7.44□□□□□ -1.22
VRK3-223ENST00000601341 SPRR1AP35321 89 aa7.44□□□□□ -1.22
VRK3-223ENST00000601341 C7orf33Q8WU49 177 aa7.44□□□□□ -1.22
VRK3-223ENST00000601341 A0A096LNI7 61 aa7.43□□□□□ -1.22
VRK3-223ENST00000601341 LINC00474Q9P2X8 69 aa7.43□□□□□ -1.22
VRK3-223ENST00000601341 IGKV2-24A0A0C4DH68 120 aa7.43□□□□□ -1.22
VRK3-223ENST00000601341 KRTAP4-16G5E9R7 235 aaPredicted RBP7.43□□□□□ -1.22
VRK3-223ENST00000601341 Q6ZRX8 168 aa7.43□□□□□ -1.22
VRK3-223ENST00000601341 IGLV1-50A0A075B6I6 118 aa7.42□□□□□ -1.22
VRK3-223ENST00000601341 IGLV5-48A0A075B6I7 105 aa7.42□□□□□ -1.22
VRK3-223ENST00000601341 SERTAD4-AS1Q5TG53 156 aa7.42□□□□□ -1.22
VRK3-223ENST00000601341 LINC00336Q6ZUF6 198 aa7.42□□□□□ -1.22
VRK3-223ENST00000601341 FAM19A1Q7Z5A9 133 aa7.42□□□□□ -1.22
VRK3-223ENST00000601341 KMT2CQ8NEZ4 4911 aaKnown RBP7.41□□□□□ -1.22
VRK3-223ENST00000601341 FRAS1Q86XX4 4008 aa7.41□□□□□ -1.22
VRK3-223ENST00000601341 FUSP35637 526 aaKnown RBP eCLIP7.41□□□□□ -1.22
VRK3-223ENST00000601341 TMEM258P61165 79 aa7.41□□□□□ -1.22
VRK3-223ENST00000601341 FAM168BA1KXE4 195 aa7.4□□□□□ -1.23
VRK3-223ENST00000601341 HAMPP81172 84 aa7.4□□□□□ -1.23
VRK3-223ENST00000601341 KRTAP10-2P60368 255 aa7.39□□□□□ -1.23
VRK3-223ENST00000601341 TRAV7A0A075B6U4 112 aa7.38□□□□□ -1.23
VRK3-223ENST00000601341 CHTF8P0CG12 524 aa7.38□□□□□ -1.23
VRK3-223ENST00000601341 RPS28P62857 69 aaKnown RBP7.38□□□□□ -1.23
VRK3-223ENST00000601341 FAM19A5Q7Z5A7 132 aaPredicted RBP7.38□□□□□ -1.23
VRK3-223ENST00000601341 RYR2Q92736 4967 aa7.38□□□□□ -1.23
VRK3-223ENST00000601341 FAT2Q9NYQ8 4349 aa7.38□□□□□ -1.23
VRK3-223ENST00000601341 Q8N377 158 aa7.38□□□□□ -1.23
VRK3-223ENST00000601341 DPH3Q96FX2 82 aa7.38□□□□□ -1.23
VRK3-223ENST00000601341 ETDCA0A1B0GVM5 59 aa7.37□□□□□ -1.23
VRK3-223ENST00000601341 A0A1W2PNN7 141 aa7.37□□□□□ -1.23
VRK3-223ENST00000601341 MRPL55Q7Z7F7 128 aaKnown RBP7.37□□□□□ -1.23
VRK3-223ENST00000601341 KRTAP7-1Q8IUC3 87 aa7.37□□□□□ -1.23
VRK3-223ENST00000601341 HECTD4Q9Y4D8 3996 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms