RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 C9orf163Q8N9P6 203 aa16.69■□□□□ 0.26
RUNDC3A-206ENST00000590941 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.69■□□□□ 0.26
RUNDC3A-206ENST00000590941 KRTAP7-1Q8IUC3 87 aa16.68■□□□□ 0.26
RUNDC3A-206ENST00000590941 LAMTOR3Q9UHA4 124 aa16.68■□□□□ 0.26
RUNDC3A-206ENST00000590941 ETDCA0A1B0GVM5 59 aa16.67■□□□□ 0.26
RUNDC3A-206ENST00000590941 CCKP06307 115 aa16.67■□□□□ 0.26
RUNDC3A-206ENST00000590941 PDE6GP18545 87 aa16.66■□□□□ 0.26
RUNDC3A-206ENST00000590941 RBM3P98179 157 aaKnown RBP16.66■□□□□ 0.26
RUNDC3A-206ENST00000590941 SDIM1Q6ZPB5 146 aa16.66■□□□□ 0.26
RUNDC3A-206ENST00000590941 LINC00474Q9P2X8 69 aa16.66■□□□□ 0.26
RUNDC3A-206ENST00000590941 Q6ZRX8 168 aa16.65■□□□□ 0.26
RUNDC3A-206ENST00000590941 RPL37AP8A6NKH3 93 aa16.65■□□□□ 0.26
RUNDC3A-206ENST00000590941 KRTAP4-16G5E9R7 235 aaPredicted RBP16.65■□□□□ 0.26
RUNDC3A-206ENST00000590941 LINC00643Q86TS7 51 aa16.65■□□□□ 0.26
RUNDC3A-206ENST00000590941 B5MCH6 92 aa16.63■□□□□ 0.25
RUNDC3A-206ENST00000590941 LOC110117498A0A087WWA1 95 aa16.62■□□□□ 0.25
RUNDC3A-206ENST00000590941 Q6Q795 121 aa16.62■□□□□ 0.25
RUNDC3A-206ENST00000590941 Q6ZR54 194 aa16.62■□□□□ 0.25
RUNDC3A-206ENST00000590941 IGKV2-24A0A0C4DH68 120 aa16.62■□□□□ 0.25
RUNDC3A-206ENST00000590941 PRKDCP78527 4128 aaKnown RBP16.61■□□□□ 0.25
RUNDC3A-206ENST00000590941 M0R2N4 97 aa16.6■□□□□ 0.25
RUNDC3A-206ENST00000590941 REG3GQ6UW15 175 aa16.6■□□□□ 0.25
RUNDC3A-206ENST00000590941 MEGF8Q7Z7M0 2845 aa16.6■□□□□ 0.25
RUNDC3A-206ENST00000590941 DSCR8Q96T75 97 aa16.59■□□□□ 0.25
RUNDC3A-206ENST00000590941 PLECQ15149 4684 aaKnown RBP16.59■□□□□ 0.25
RUNDC3A-206ENST00000590941 DNAH7Q8WXX0 4024 aa16.57■□□□□ 0.24
RUNDC3A-206ENST00000590941 WWC2-AS2Q96NR7 200 aa16.56■□□□□ 0.24
RUNDC3A-206ENST00000590941 CSMD3Q7Z407 3707 aa16.56■□□□□ 0.24
RUNDC3A-206ENST00000590941 A0A1B0GV72 72 aa16.56■□□□□ 0.24
RUNDC3A-206ENST00000590941 NDUFV3P56181 108 aaKnown RBP16.56■□□□□ 0.24
RUNDC3A-206ENST00000590941 IMUPQ9GZP8 106 aa16.56■□□□□ 0.24
RUNDC3A-206ENST00000590941 A0A087WTM6 91 aa16.55■□□□□ 0.24
RUNDC3A-206ENST00000590941 TRBV7-7A0A0K0K1E9 115 aa16.54■□□□□ 0.24
RUNDC3A-206ENST00000590941 A0A1W2PNN7 141 aa16.54■□□□□ 0.24
RUNDC3A-206ENST00000590941 Q6ZQT0 140 aa16.54■□□□□ 0.24
RUNDC3A-206ENST00000590941 SMCR5Q8TEV8 140 aa16.53■□□□□ 0.24
RUNDC3A-206ENST00000590941 Q9BRP9 147 aa16.5■□□□□ 0.23
RUNDC3A-206ENST00000590941 LINC00846Q9NV44 126 aa16.5■□□□□ 0.23
RUNDC3A-206ENST00000590941 VPS13DQ5THJ4 4388 aa16.49■□□□□ 0.23
RUNDC3A-206ENST00000590941 TRBV7-4A0A0J9YYF1 115 aa16.49■□□□□ 0.23
RUNDC3A-206ENST00000590941 C1orf134Q5TEV5 83 aa16.49■□□□□ 0.23
RUNDC3A-206ENST00000590941 STARD9Q9P2P6 4700 aa16.49■□□□□ 0.23
RUNDC3A-206ENST00000590941 LYSTQ99698 3801 aa16.47■□□□□ 0.23
RUNDC3A-206ENST00000590941 UBE2BP63146 152 aa16.47■□□□□ 0.23
RUNDC3A-206ENST00000590941 IGLV5-48A0A075B6I7 105 aa16.46■□□□□ 0.23
RUNDC3A-206ENST00000590941 CHTF8P0CG12 524 aa16.46■□□□□ 0.23
RUNDC3A-206ENST00000590941 Q6JHZ5 121 aa16.46■□□□□ 0.23
RUNDC3A-206ENST00000590941 LY6G6CO95867 125 aa16.43■□□□□ 0.22
RUNDC3A-206ENST00000590941 Q8N377 158 aa16.43■□□□□ 0.22
RUNDC3A-206ENST00000590941 UBL5Q9BZL1 73 aa16.43■□□□□ 0.22
RUNDC3A-206ENST00000590941 ATP5EP2Q5VTU8 51 aa16.43■□□□□ 0.22
RUNDC3A-206ENST00000590941 LINC00476Q8WZB0 136 aa16.43■□□□□ 0.22
RUNDC3A-206ENST00000590941 DNAH10Q8IVF4 4471 aa16.42■□□□□ 0.22
RUNDC3A-206ENST00000590941 LINC01547P58512 204 aaPredicted RBP16.41■□□□□ 0.22
RUNDC3A-206ENST00000590941 FAM19A1Q7Z5A9 133 aa16.41■□□□□ 0.22
RUNDC3A-206ENST00000590941 H0Y9J4 135 aa16.4■□□□□ 0.22
RUNDC3A-206ENST00000590941 C3orf84H3BNL1 204 aa16.4■□□□□ 0.22
RUNDC3A-206ENST00000590941 PHF5AQ7RTV0 110 aaKnown RBP16.4■□□□□ 0.22
RUNDC3A-206ENST00000590941 DEFB105AQ8NG35 78 aa16.4■□□□□ 0.22
RUNDC3A-206ENST00000590941 SPACA4Q8TDM5 124 aa16.4■□□□□ 0.22
RUNDC3A-206ENST00000590941 FBN3Q75N90 2809 aa16.39■□□□□ 0.21
RUNDC3A-206ENST00000590941 EPM2AB3EWF7 344 aa16.39■□□□□ 0.21
RUNDC3A-206ENST00000590941 RTL8CO15255 209 aa16.39■□□□□ 0.21
RUNDC3A-206ENST00000590941 TENM2Q9NT68 2774 aa16.36■□□□□ 0.21
RUNDC3A-206ENST00000590941 DPH3Q96FX2 82 aa16.35■□□□□ 0.21
RUNDC3A-206ENST00000590941 A0A1B0GW54 56 aa16.32■□□□□ 0.2
RUNDC3A-206ENST00000590941 ERC2-IT1O76042 136 aa16.31■□□□□ 0.2
RUNDC3A-206ENST00000590941 ST20-AS1Q8NBB2 130 aa16.3■□□□□ 0.2
RUNDC3A-206ENST00000590941 IGLV5-52A0A0A0MRZ9 124 aa16.3■□□□□ 0.2
RUNDC3A-206ENST00000590941 PRLHP81277 87 aa16.3■□□□□ 0.2
RUNDC3A-206ENST00000590941 TNP2Q05952 138 aa16.28■□□□□ 0.2
RUNDC3A-206ENST00000590941 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.28■□□□□ 0.2
RUNDC3A-206ENST00000590941 BCE1O60756 84 aa16.27■□□□□ 0.2
RUNDC3A-206ENST00000590941 PANO1I0J062 215 aa16.27■□□□□ 0.19
RUNDC3A-206ENST00000590941 F8WEM9 126 aa16.26■□□□□ 0.19
RUNDC3A-206ENST00000590941 UBE2AP49459 152 aa16.26■□□□□ 0.19
RUNDC3A-206ENST00000590941 HIGD2AQ9BW72 106 aa16.26■□□□□ 0.19
RUNDC3A-206ENST00000590941 ANAPC13Q9BS18 74 aa16.25■□□□□ 0.19
RUNDC3A-206ENST00000590941 IGKV3D-7A0A0C4DH55 119 aa16.24■□□□□ 0.19
RUNDC3A-206ENST00000590941 Q6ZVQ6 151 aa16.23■□□□□ 0.19
RUNDC3A-206ENST00000590941 FUSP35637 526 aaKnown RBP eCLIP16.22■□□□□ 0.19
RUNDC3A-206ENST00000590941 KRTAP11-1Q8IUC1 163 aa16.22■□□□□ 0.19
RUNDC3A-206ENST00000590941 PLAC8Q9NZF1 115 aa16.22■□□□□ 0.19
RUNDC3A-206ENST00000590941 C1orf137Q5JT78 98 aa16.21■□□□□ 0.18
RUNDC3A-206ENST00000590941 FAM236AA0A1B0GUQ0 79 aa16.19■□□□□ 0.18
RUNDC3A-206ENST00000590941 FAM236BA0A1B0GV22 79 aa16.19■□□□□ 0.18
RUNDC3A-206ENST00000590941 C3orf22Q8N5N4 141 aa16.19■□□□□ 0.18
RUNDC3A-206ENST00000590941 SPRR1BP22528 89 aa16.18■□□□□ 0.18
RUNDC3A-206ENST00000590941 CXCL6P80162 114 aa16.18■□□□□ 0.18
RUNDC3A-206ENST00000590941 SMIM29Q86T20 159 aa16.18■□□□□ 0.18
RUNDC3A-206ENST00000590941 DNAH6Q9C0G6 4158 aa16.17■□□□□ 0.18
RUNDC3A-206ENST00000590941 KRTAP13-1Q8IUC0 172 aa16.15■□□□□ 0.18
RUNDC3A-206ENST00000590941 IGLV8-61A0A075B6I0 122 aa16.14■□□□□ 0.18
RUNDC3A-206ENST00000590941 Q8NBF4 154 aa16.14■□□□□ 0.18
RUNDC3A-206ENST00000590941 HIST1H4AP62805 103 aaKnown RBP16.12■□□□□ 0.17
RUNDC3A-206ENST00000590941 HAMPP81172 84 aa16.12■□□□□ 0.17
RUNDC3A-206ENST00000590941 ALMS1Q8TCU4 4167 aa16.11■□□□□ 0.17
RUNDC3A-206ENST00000590941 SPRR4Q96PI1 79 aa16.1■□□□□ 0.17
RUNDC3A-206ENST00000590941 NREPQ16612 68 aa16.08■□□□□ 0.17
RUNDC3A-206ENST00000590941 A0A1W2PNM2 257 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms