RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 ZNF815PA8K554 130 aa9.28□□□□□ -0.92
MBD3-206ENST00000589901 SPAG11AQ6PDA7 123 aa9.28□□□□□ -0.92
MBD3-206ENST00000589901 S100A2P29034 98 aa9.27□□□□□ -0.93
MBD3-206ENST00000589901 HINT1P49773 126 aaPredicted RBP9.26□□□□□ -0.93
MBD3-206ENST00000589901 NPC2P61916 151 aa9.26□□□□□ -0.93
MBD3-206ENST00000589901 SCGB1D4Q6XE38 83 aa9.26□□□□□ -0.93
MBD3-206ENST00000589901 COPS9Q8WXC6 57 aa9.26□□□□□ -0.93
MBD3-206ENST00000589901 TIMM17BO60830 172 aa9.25□□□□□ -0.93
MBD3-206ENST00000589901 S100A6P06703 90 aa9.25□□□□□ -0.93
MBD3-206ENST00000589901 Q8NBF4 154 aa9.25□□□□□ -0.93
MBD3-206ENST00000589901 SPRR1AP35321 89 aa9.24□□□□□ -0.93
MBD3-206ENST00000589901 JOSD1Q15040 202 aaPredicted RBP9.24□□□□□ -0.93
MBD3-206ENST00000589901 C4orf48Q5BLP8 95 aa9.24□□□□□ -0.93
MBD3-206ENST00000589901 SMCR5Q8TEV8 140 aa9.24□□□□□ -0.93
MBD3-206ENST00000589901 FP248Q71RG6 208 aaPredicted RBP9.23□□□□□ -0.93
MBD3-206ENST00000589901 SPANXCQ9NY87 97 aa9.23□□□□□ -0.93
MBD3-206ENST00000589901 TRAV23DV6A0A075B6W5 121 aa9.22□□□□□ -0.93
MBD3-206ENST00000589901 KRTAP4-16G5E9R7 235 aaPredicted RBP9.22□□□□□ -0.93
MBD3-206ENST00000589901 SNRPEP62304 92 aaKnown RBP9.22□□□□□ -0.93
MBD3-206ENST00000589901 ADAMTSL4-AS1Q5T5F5 129 aa9.22□□□□□ -0.93
MBD3-206ENST00000589901 OR13C6PQ8NH95 151 aa9.22□□□□□ -0.93
MBD3-206ENST00000589901 LINC00308Q8TCZ7 52 aa9.21□□□□□ -0.94
MBD3-206ENST00000589901 HSBP1L1C9JCN9 74 aa9.2□□□□□ -0.94
MBD3-206ENST00000589901 IGLV6-57P01721 117 aa9.2□□□□□ -0.94
MBD3-206ENST00000589901 KRTAP13-3Q3SY46 172 aa9.2□□□□□ -0.94
MBD3-206ENST00000589901 LINC00518Q8N0U6 118 aa9.2□□□□□ -0.94
MBD3-206ENST00000589901 B5MCH6 92 aa9.18□□□□□ -0.94
MBD3-206ENST00000589901 ZNF73O43830 326 aaPredicted RBP9.18□□□□□ -0.94
MBD3-206ENST00000589901 LINC00483Q53H64 154 aa9.18□□□□□ -0.94
MBD3-206ENST00000589901 SOSTDC1Q6X4U4 206 aa9.18□□□□□ -0.94
MBD3-206ENST00000589901 ATOH7Q8N100 152 aa9.18□□□□□ -0.94
MBD3-206ENST00000589901 SPINK1P00995 79 aa9.17□□□□□ -0.94
MBD3-206ENST00000589901 GAGE2AQ6NT46 116 aa9.17□□□□□ -0.94
MBD3-206ENST00000589901 Q6ZRX8 168 aa9.17□□□□□ -0.94
MBD3-206ENST00000589901 SPANXDQ9BXN6 97 aa9.17□□□□□ -0.94
MBD3-206ENST00000589901 ERC2-IT1O76042 136 aa9.16□□□□□ -0.94
MBD3-206ENST00000589901 Q6ZVH6 145 aa9.16□□□□□ -0.94
MBD3-206ENST00000589901 LITAFQ99732 161 aa9.16□□□□□ -0.94
MBD3-206ENST00000589901 IGLV9-49A0A0B4J1Y8 123 aa9.15□□□□□ -0.94
MBD3-206ENST00000589901 IFITM1P13164 125 aa9.15□□□□□ -0.94
MBD3-206ENST00000589901 TTTY13Q9BZ97 58 aa9.15□□□□□ -0.94
MBD3-206ENST00000589901 MOBPQ13875 183 aa9.14□□□□□ -0.95
MBD3-206ENST00000589901 ASB16-AS1Q495Z4 193 aa9.14□□□□□ -0.95
MBD3-206ENST00000589901 HIST3H2BBQ8N257 126 aa9.14□□□□□ -0.95
MBD3-206ENST00000589901 ANKRD39Q53RE8 183 aa9.13□□□□□ -0.95
MBD3-206ENST00000589901 HIST1H2BLQ99880 126 aa9.13□□□□□ -0.95
MBD3-206ENST00000589901 Q9BRP9 147 aa9.13□□□□□ -0.95
MBD3-206ENST00000589901 KRTAP4-1Q9BYQ7 146 aa9.13□□□□□ -0.95
MBD3-206ENST00000589901 EIF4EBP3O60516 100 aaPredicted RBP9.12□□□□□ -0.95
MBD3-206ENST00000589901 KRTAP9-6A0A140TA67 174 aa9.11□□□□□ -0.95
MBD3-206ENST00000589901 Q8N377 158 aa9.11□□□□□ -0.95
MBD3-206ENST00000589901 C5orf52A6NGY3 159 aa9.1□□□□□ -0.95
MBD3-206ENST00000589901 SLC25A34Q6PIV7 304 aa9.1□□□□□ -0.95
MBD3-206ENST00000589901 DHRS4-AS1Q9P1J3 65 aa9.1□□□□□ -0.95
MBD3-206ENST00000589901 A6NDN8 102 aa9.09□□□□□ -0.95
MBD3-206ENST00000589901 SSBP3-AS1Q7Z2R9 100 aa9.09□□□□□ -0.95
MBD3-206ENST00000589901 RPS29P62273 56 aaKnown RBP9.08□□□□□ -0.96
MBD3-206ENST00000589901 PCP2Q8IVA1 136 aa9.08□□□□□ -0.96
MBD3-206ENST00000589901 SCGB1D1O95968 90 aa9.07□□□□□ -0.96
MBD3-206ENST00000589901 COX7BP24311 80 aa9.07□□□□□ -0.96
MBD3-206ENST00000589901 SEC61BP60468 96 aaKnown RBP9.07□□□□□ -0.96
MBD3-206ENST00000589901 TRAV13-2A0A0B4J235 113 aa9.06□□□□□ -0.96
MBD3-206ENST00000589901 C6orf99Q4VX62 202 aa9.06□□□□□ -0.96
MBD3-206ENST00000589901 C9orf153Q5TBE3 101 aa9.06□□□□□ -0.96
MBD3-206ENST00000589901 MUSTN1Q8IVN3 82 aa9.06□□□□□ -0.96
MBD3-206ENST00000589901 SLC25A20O43772 301 aa9.05□□□□□ -0.96
MBD3-206ENST00000589901 LINC01547P58512 204 aaPredicted RBP9.04□□□□□ -0.96
MBD3-206ENST00000589901 ELOF1P60002 83 aaKnown RBP9.03□□□□□ -0.96
MBD3-206ENST00000589901 ST20-AS1Q8NBB2 130 aa9.03□□□□□ -0.96
MBD3-206ENST00000589901 TRBV7-6A0A0J9YX20 115 aa9.02□□□□□ -0.97
MBD3-206ENST00000589901 A0A1B0GWB2 263 aa9.01□□□□□ -0.97
MBD3-206ENST00000589901 A4D1N5 150 aa9.01□□□□□ -0.97
MBD3-206ENST00000589901 TAL2Q16559 108 aa9.01□□□□□ -0.97
MBD3-206ENST00000589901 XP32Q5T750 250 aa9.01□□□□□ -0.97
MBD3-206ENST00000589901 NHP2Q9NX24 153 aaKnown RBP9.01□□□□□ -0.97
MBD3-206ENST00000589901 LAMTOR3Q9UHA4 124 aa9.01□□□□□ -0.97
MBD3-206ENST00000589901 VAMP3Q15836 100 aa9□□□□□ -0.97
MBD3-206ENST00000589901 DEFB105AQ8NG35 78 aa8.97□□□□□ -0.97
MBD3-206ENST00000589901 HIST1H4GQ99525 98 aa8.96□□□□□ -0.98
MBD3-206ENST00000589901 TEX49A0A1B0GTD5 131 aa8.95□□□□□ -0.98
MBD3-206ENST00000589901 SPRR1BP22528 89 aa8.94□□□□□ -0.98
MBD3-206ENST00000589901 COX8AP10176 69 aa8.93□□□□□ -0.98
MBD3-206ENST00000589901 LCE2CQ5TA81 110 aa8.93□□□□□ -0.98
MBD3-206ENST00000589901 HRCT1Q6UXD1 115 aa8.93□□□□□ -0.98
MBD3-206ENST00000589901 SMIM11BQ8TCY0 68 aa8.93□□□□□ -0.98
MBD3-206ENST00000589901 LCE2DQ5TA82 110 aaPredicted RBP8.92□□□□□ -0.98
MBD3-206ENST00000589901 LIMD2Q9BT23 127 aa8.92□□□□□ -0.98
MBD3-206ENST00000589901 VAMP8Q9BV40 100 aa8.92□□□□□ -0.98
MBD3-206ENST00000589901 DLEU1O43261 78 aa8.91□□□□□ -0.98
MBD3-206ENST00000589901 Q1RN00 199 aa8.91□□□□□ -0.98
MBD3-206ENST00000589901 PRO1933Q9H354 126 aa8.9□□□□□ -0.98
MBD3-206ENST00000589901 PAM16Q9Y3D7 125 aa8.9□□□□□ -0.98
MBD3-206ENST00000589901 SPATA45Q537H7 98 aa8.89□□□□□ -0.99
MBD3-206ENST00000589901 FSIP2Q5CZC0 6907 aa8.89□□□□□ -0.99
MBD3-206ENST00000589901 C9orf92A6NGG3 77 aa8.88□□□□□ -0.99
MBD3-206ENST00000589901 F8WEM9 126 aa8.88□□□□□ -0.99
MBD3-206ENST00000589901 SNCGO76070 127 aa8.88□□□□□ -0.99
MBD3-206ENST00000589901 KRTAP19-2Q3LHN2 52 aa8.88□□□□□ -0.99
MBD3-206ENST00000589901 BVES-AS1Q5T3Y7 98 aa8.88□□□□□ -0.99
MBD3-206ENST00000589901 PCOTHQ58A44 107 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms