RNA–Protein interactions for RNA: ENST00000570473.5

TRIM25-203, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-203ENST00000570473 WNK1Q9H4A3 2382 aa5□□□□□ -1.61
TRIM25-203ENST00000570473 H1FX-AS1Q4G0G2 97 aa5□□□□□ -1.61
TRIM25-203ENST00000570473 WWC2-AS2Q96NR7 200 aa5□□□□□ -1.61
TRIM25-203ENST00000570473 CACNA1GO43497 2377 aa4.99□□□□□ -1.61
TRIM25-203ENST00000570473 LY6EQ16553 131 aa4.99□□□□□ -1.61
TRIM25-203ENST00000570473 A0A1W2PPR1 153 aa4.98□□□□□ -1.61
TRIM25-203ENST00000570473 CACNA1BQ00975 2339 aa4.98□□□□□ -1.61
TRIM25-203ENST00000570473 DEFB119Q8N690 84 aa4.97□□□□□ -1.61
TRIM25-203ENST00000570473 TRIOBPQ9H2D6 2365 aa4.96□□□□□ -1.62
TRIM25-203ENST00000570473 INE1O15225 51 aa4.96□□□□□ -1.62
TRIM25-203ENST00000570473 R4GN34 69 aa4.95□□□□□ -1.62
TRIM25-203ENST00000570473 IGKV2D-30A0A075B6S6 120 aa4.94□□□□□ -1.62
TRIM25-203ENST00000570473 IGKV2-30P06310 120 aa4.94□□□□□ -1.62
TRIM25-203ENST00000570473 MGAQ8IWI9 3026 aa4.93□□□□□ -1.62
TRIM25-203ENST00000570473 RPL37P61927 97 aaKnown RBP4.92□□□□□ -1.62
TRIM25-203ENST00000570473 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.92□□□□□ -1.622e-10■■■□□ 17.1
TRIM25-203ENST00000570473 TPRP12270 2363 aaKnown RBP4.92□□□□□ -1.62
TRIM25-203ENST00000570473 CEP350Q5VT06 3117 aa4.91□□□□□ -1.62
TRIM25-203ENST00000570473 ZFHX2Q9C0A1 2572 aaPredicted RBP4.89□□□□□ -1.63
TRIM25-203ENST00000570473 NOP10Q9NPE3 64 aaKnown RBP4.89□□□□□ -1.63
TRIM25-203ENST00000570473 PRO0255Q9UI72 69 aa4.89□□□□□ -1.63
TRIM25-203ENST00000570473 COL6A6A6NMZ7 2263 aa4.89□□□□□ -1.63
TRIM25-203ENST00000570473 C10orf99Q6UWK7 81 aa4.88□□□□□ -1.63
TRIM25-203ENST00000570473 SPACA4Q8TDM5 124 aa4.87□□□□□ -1.63
TRIM25-203ENST00000570473 COL6A3P12111 3177 aa4.87□□□□□ -1.63
TRIM25-203ENST00000570473 CACNA1EQ15878 2313 aa4.86□□□□□ -1.63
TRIM25-203ENST00000570473 DEFB130BP0DP73 79 aa4.86□□□□□ -1.63
TRIM25-203ENST00000570473 DEFB130AP0DP74 79 aa4.86□□□□□ -1.63
TRIM25-203ENST00000570473 C14orf177Q52M58 125 aa4.86□□□□□ -1.63
TRIM25-203ENST00000570473 XP32Q5T750 250 aa4.86□□□□□ -1.63
TRIM25-203ENST00000570473 SRCAPQ6ZRS2 3230 aa4.85□□□□□ -1.63
TRIM25-203ENST00000570473 LYNX1P0DP58 116 aa4.84□□□□□ -1.63
TRIM25-203ENST00000570473 LELP1Q5T871 98 aa4.84□□□□□ -1.63
TRIM25-203ENST00000570473 Q6ZRN7 208 aaPredicted RBP4.84□□□□□ -1.63
TRIM25-203ENST00000570473 K7EIL1 84 aa4.79□□□□□ -1.64
TRIM25-203ENST00000570473 TYMSOSQ8TAI1 123 aa4.79□□□□□ -1.64
TRIM25-203ENST00000570473 U3KQA8 63 aa4.77□□□□□ -1.65
TRIM25-203ENST00000570473 IGF2RP11717 2491 aa4.77□□□□□ -1.65
TRIM25-203ENST00000570473 UBE2DNLQ8IWF7 75 aa4.76□□□□□ -1.65
TRIM25-203ENST00000570473 DEFB123Q8N688 67 aa4.76□□□□□ -1.65
TRIM25-203ENST00000570473 DEFB103AP81534 67 aa4.75□□□□□ -1.65
TRIM25-203ENST00000570473 BRD3OSQ6XYD6 125 aa4.75□□□□□ -1.65
TRIM25-203ENST00000570473 CHD7Q9P2D1 2997 aa4.75□□□□□ -1.65
TRIM25-203ENST00000570473 SPTBN2O15020 2390 aa4.74□□□□□ -1.65
TRIM25-203ENST00000570473 KRTAP4-8Q9BYQ9 185 aa4.73□□□□□ -1.65
TRIM25-203ENST00000570473 PRLHP81277 87 aa4.72□□□□□ -1.65
TRIM25-203ENST00000570473 KRTAP12-2P59991 146 aa4.71□□□□□ -1.66
TRIM25-203ENST00000570473 DEFB136Q30KP8 78 aa4.7□□□□□ -1.66
TRIM25-203ENST00000570473 C10orf95Q9H7T3 257 aa4.7□□□□□ -1.66
TRIM25-203ENST00000570473 ACACAQ13085 2346 aa4.7□□□□□ -1.66
TRIM25-203ENST00000570473 GOLGB1Q14789 3259 aaKnown RBP4.7□□□□□ -1.66
TRIM25-203ENST00000570473 ZDBF2Q9HCK1 2354 aa4.68□□□□□ -1.66
TRIM25-203ENST00000570473 AKAP6Q13023 2319 aa4.67□□□□□ -1.66
TRIM25-203ENST00000570473 PCNTO95613 3336 aa4.67□□□□□ -1.66
TRIM25-203ENST00000570473 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.65□□□□□ -1.67
TRIM25-203ENST00000570473 PKDREJQ9NTG1 2253 aa4.65□□□□□ -1.67
TRIM25-203ENST00000570473 CENPFP49454 3210 aa4.65□□□□□ -1.67
TRIM25-203ENST00000570473 FAM186AA6NE01 2351 aa4.64□□□□□ -1.67
TRIM25-203ENST00000570473 FLG2Q5D862 2391 aaPredicted RBP4.64□□□□□ -1.67
TRIM25-203ENST00000570473 SPTA1P02549 2419 aa4.64□□□□□ -1.67
TRIM25-203ENST00000570473 CEP250Q9BV73 2442 aa4.64□□□□□ -1.67
TRIM25-203ENST00000570473 PCNX1Q96RV3 2341 aa4.64□□□□□ -1.67
TRIM25-203ENST00000570473 KRTAP1-3Q8IUG1 177 aa4.63□□□□□ -1.67
TRIM25-203ENST00000570473 KRTAP9-2Q9BYQ4 174 aa4.63□□□□□ -1.67
TRIM25-203ENST00000570473 TNRC18O15417 2968 aaPredicted RBP4.62□□□□□ -1.67
TRIM25-203ENST00000570473 MAP1BP46821 2468 aaKnown RBP4.62□□□□□ -1.67
TRIM25-203ENST00000570473 ZZEF1O43149 2961 aa4.61□□□□□ -1.67
TRIM25-203ENST00000570473 H3BNG1 76 aa4.61□□□□□ -1.67
TRIM25-203ENST00000570473 SPINK1P00995 79 aa4.61□□□□□ -1.67
TRIM25-203ENST00000570473 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
TRIM25-203ENST00000570473 KRTAP9-6A0A140TA67 174 aa4.6□□□□□ -1.67
TRIM25-203ENST00000570473 NBEAQ8NFP9 2946 aa4.59□□□□□ -1.68
TRIM25-203ENST00000570473 TENM2Q9NT68 2774 aa4.59□□□□□ -1.68
TRIM25-203ENST00000570473 APC2O95996 2303 aa4.57□□□□□ -1.68
TRIM25-203ENST00000570473 CFAP54Q96N23 3096 aa4.57□□□□□ -1.68
TRIM25-203ENST00000570473 S4R3F8 94 aa4.57□□□□□ -1.68
TRIM25-203ENST00000570473 KRTAP7-1Q8IUC3 87 aa4.56□□□□□ -1.68
TRIM25-203ENST00000570473 NOTCH3Q9UM47 2321 aa4.56□□□□□ -1.68
TRIM25-203ENST00000570473 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
TRIM25-203ENST00000570473 CHD6Q8TD26 2715 aa4.55□□□□□ -1.68
TRIM25-203ENST00000570473 UTRNP46939 3433 aa4.54□□□□□ -1.68
TRIM25-203ENST00000570473 A0A096LPF7 62 aa4.54□□□□□ -1.68
TRIM25-203ENST00000570473 PIEZO2Q9H5I5 2752 aa4.52□□□□□ -1.69
TRIM25-203ENST00000570473 LINC01556Q5JQF7 62 aa4.52□□□□□ -1.69
TRIM25-203ENST00000570473 VPS13AQ96RL7 3174 aa4.52□□□□□ -1.69
TRIM25-203ENST00000570473 OTOGQ6ZRI0 2925 aa4.52□□□□□ -1.69
TRIM25-203ENST00000570473 SPTBN4Q9H254 2564 aa4.52□□□□□ -1.69
TRIM25-203ENST00000570473 PTPRZ1P23471 2315 aaPredicted RBP4.51□□□□□ -1.69
TRIM25-203ENST00000570473 KRTAP19-4Q3LI73 84 aa4.51□□□□□ -1.69
TRIM25-203ENST00000570473 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
TRIM25-203ENST00000570473 KRTAP19-1Q8IUB9 90 aa4.48□□□□□ -1.69
TRIM25-203ENST00000570473 KRTAP13-1Q8IUC0 172 aa4.48□□□□□ -1.69
TRIM25-203ENST00000570473 GPR179Q6PRD1 2367 aa4.48□□□□□ -1.69
TRIM25-203ENST00000570473 ASH1LQ9NR48 2969 aaKnown RBP4.47□□□□□ -1.69
TRIM25-203ENST00000570473 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
TRIM25-203ENST00000570473 DEFB124Q8NES8 71 aa4.47□□□□□ -1.69
TRIM25-203ENST00000570473 APLNQ9ULZ1 77 aa4.47□□□□□ -1.69
TRIM25-203ENST00000570473 RANBP2P49792 3224 aaKnown RBP4.46□□□□□ -1.7
TRIM25-203ENST00000570473 PRUNE2Q8WUY3 3088 aa4.45□□□□□ -1.7
TRIM25-203ENST00000570473 CACNA1HO95180 2353 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms