RNA–Protein interactions for RNA: ENST00000570473.5

TRIM25-203, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-203ENST00000570473 MYT1Q01538 1121 aa17.07■□□□□ 0.32
TRIM25-203ENST00000570473 PELP1Q8IZL8 1130 aaKnown RBP16.9■□□□□ 0.3
TRIM25-203ENST00000570473 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
TRIM25-203ENST00000570473 AEBP2Q6ZN18 517 aaPredicted RBP16.4■□□□□ 0.22
TRIM25-203ENST00000570473 SLC24A1O60721 1099 aa16.38■□□□□ 0.21
TRIM25-203ENST00000570473 CHIC1Q5VXU3 224 aa16.08■□□□□ 0.16
TRIM25-203ENST00000570473 ERICH6Q7L0X2 663 aa15.81■□□□□ 0.12
TRIM25-203ENST00000570473 APLP2Q06481 763 aa15.6■□□□□ 0.09
TRIM25-203ENST00000570473 DAXXQ9UER7 740 aaPredicted RBP15.57■□□□□ 0.08
TRIM25-203ENST00000570473 PRKCSHP14314 528 aaPredicted RBP15.39■□□□□ 0.05
TRIM25-203ENST00000570473 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
TRIM25-203ENST00000570473 BCL11AQ9H165 835 aa14.61□□□□□ -0.07
TRIM25-203ENST00000570473 EIF5BO60841 1220 aaKnown RBP14.58□□□□□ -0.08
TRIM25-203ENST00000570473 ARXQ96QS3 562 aa14.49□□□□□ -0.09
TRIM25-203ENST00000570473 RANGAP1P46060 587 aaPredicted RBP14.39□□□□□ -0.11
TRIM25-203ENST00000570473 HRCP23327 699 aa14.23□□□□□ -0.13
TRIM25-203ENST00000570473 CENPBP07199 599 aaPredicted RBP14.22□□□□□ -0.13
TRIM25-203ENST00000570473 FAM9AQ8IZU1 332 aaPredicted RBP14.21□□□□□ -0.13
TRIM25-203ENST00000570473 PHF23Q9BUL5 403 aaPredicted RBP14.07□□□□□ -0.16
TRIM25-203ENST00000570473 SENP3Q9H4L4 574 aaPredicted RBP14.06□□□□□ -0.16
TRIM25-203ENST00000570473 SCAF1Q9H7N4 1312 aaKnown RBP14□□□□□ -0.17
TRIM25-203ENST00000570473 UBE2Q2Q8WVN8 375 aa14□□□□□ -0.17
TRIM25-203ENST00000570473 AMER1Q5JTC6 1135 aaPredicted RBP13.95□□□□□ -0.18
TRIM25-203ENST00000570473 RTN4Q9NQC3 1192 aaKnown RBP13.93□□□□□ -0.18
TRIM25-203ENST00000570473 HOMEZQ8IX15 550 aa13.91□□□□□ -0.18
TRIM25-203ENST00000570473 EHMT2Q96KQ7 1210 aa13.82□□□□□ -0.2
TRIM25-203ENST00000570473 PODXL2Q9NZ53 605 aa13.79□□□□□ -0.2
TRIM25-203ENST00000570473 ANP32EQ9BTT0 268 aa13.74□□□□□ -0.21
TRIM25-203ENST00000570473 PLPPR3Q6T4P5 718 aa13.71□□□□□ -0.21
TRIM25-203ENST00000570473 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.21
TRIM25-203ENST00000570473 PLEKHG5O94827 1062 aa13.67□□□□□ -0.22
TRIM25-203ENST00000570473 NEFLP07196 543 aa13.64□□□□□ -0.23
TRIM25-203ENST00000570473 KLHL34Q8N239 644 aa13.62□□□□□ -0.23
TRIM25-203ENST00000570473 PKNOX2Q96KN3 472 aa13.55□□□□□ -0.24
TRIM25-203ENST00000570473 ERICH6BQ5W0A0 696 aa13.54□□□□□ -0.24
TRIM25-203ENST00000570473 MYT1LQ9UL68 1186 aa13.51□□□□□ -0.25
TRIM25-203ENST00000570473 ACIN1Q9UKV3 1341 aaKnown RBP13.49□□□□□ -0.25
TRIM25-203ENST00000570473 TULP1O00294 542 aaPredicted RBP13.49□□□□□ -0.25
TRIM25-203ENST00000570473 PDIA4P13667 645 aaKnown RBP13.49□□□□□ -0.25
TRIM25-203ENST00000570473 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
TRIM25-203ENST00000570473 ZEB1P37275 1124 aaPredicted RBP13.42□□□□□ -0.26
TRIM25-203ENST00000570473 DCAF8L2P0C7V8 631 aa13.36□□□□□ -0.27
TRIM25-203ENST00000570473 PDE4CQ08493 712 aa13.36□□□□□ -0.27
TRIM25-203ENST00000570473 NPM2Q86SE8 214 aaKnown RBP13.36□□□□□ -0.27
TRIM25-203ENST00000570473 TAOK2Q9UL54 1235 aa13.34□□□□□ -0.27
TRIM25-203ENST00000570473 TAF7LQ5H9L4 462 aa13.33□□□□□ -0.28
TRIM25-203ENST00000570473 BCANQ96GW7 911 aa13.27□□□□□ -0.29
TRIM25-203ENST00000570473 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
TRIM25-203ENST00000570473 CDK11AQ9UQ88 783 aaPredicted RBP13.26□□□□□ -0.29
TRIM25-203ENST00000570473 CLSPNQ9HAW4 1339 aa13.23□□□□□ -0.29
TRIM25-203ENST00000570473 ANO8Q9HCE9 1232 aaPredicted RBP13.23□□□□□ -0.29
TRIM25-203ENST00000570473 ZNF326Q5BKZ1 582 aaKnown RBP13.21□□□□□ -0.29
TRIM25-203ENST00000570473 GTF3C3Q9Y5Q9 886 aa13.19□□□□□ -0.3
TRIM25-203ENST00000570473 BRD2P25440 801 aaKnown RBP13.16□□□□□ -0.3
TRIM25-203ENST00000570473 GLIPR1L2Q4G1C9 344 aa13.16□□□□□ -0.3
TRIM25-203ENST00000570473 FGD1P98174 961 aa13.15□□□□□ -0.3
TRIM25-203ENST00000570473 C14orf37Q86TY3 774 aa13.11□□□□□ -0.31
TRIM25-203ENST00000570473 KCNA4P22459 653 aa13.04□□□□□ -0.32
TRIM25-203ENST00000570473 PPARGC1BQ86YN6 1023 aaKnown RBP13.04□□□□□ -0.32
TRIM25-203ENST00000570473 NEUROD1Q13562 356 aa13.03□□□□□ -0.32
TRIM25-203ENST00000570473 TPRNQ4KMQ1 711 aa13.02□□□□□ -0.33
TRIM25-203ENST00000570473 HMGB1P09429 215 aaKnown RBP13.01□□□□□ -0.33
TRIM25-203ENST00000570473 CNKSR2Q8WXI2 1034 aa13□□□□□ -0.33
TRIM25-203ENST00000570473 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
TRIM25-203ENST00000570473 CDK11BP21127 795 aaKnown RBP12.96□□□□□ -0.33
TRIM25-203ENST00000570473 FOXD1Q16676 465 aa12.96□□□□□ -0.33
TRIM25-203ENST00000570473 RSPH4AQ5TD94 716 aa12.96□□□□□ -0.33
TRIM25-203ENST00000570473 CHMP4AQ9BY43 222 aa12.95□□□□□ -0.34
TRIM25-203ENST00000570473 BCCIPQ9P287 314 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRIM25-203ENST00000570473 RSPH6AQ9H0K4 717 aa12.92□□□□□ -0.34
TRIM25-203ENST00000570473 AAMPQ13685 434 aa12.9□□□□□ -0.34
TRIM25-203ENST00000570473 BCL11BQ9C0K0 894 aaPredicted RBP12.88□□□□□ -0.35
TRIM25-203ENST00000570473 SALL2Q9Y467 1007 aaPredicted RBP12.87□□□□□ -0.35
TRIM25-203ENST00000570473 SAMD1Q6SPF0 538 aaPredicted RBP12.82□□□□□ -0.36
TRIM25-203ENST00000570473 TMEM132AQ24JP5 1023 aa12.8□□□□□ -0.36
TRIM25-203ENST00000570473 LOC105371045A0A1W2PR82 267 aa12.79□□□□□ -0.36
TRIM25-203ENST00000570473 ARID3AQ99856 593 aa12.76□□□□□ -0.37
TRIM25-203ENST00000570473 SHROOM4Q9ULL8 1493 aa12.75□□□□□ -0.37
TRIM25-203ENST00000570473 NAP1L5Q96NT1 182 aaPredicted RBP12.73□□□□□ -0.37
TRIM25-203ENST00000570473 CCDC180Q9P1Z9 1646 aa12.73□□□□□ -0.37
TRIM25-203ENST00000570473 DCAF1Q9Y4B6 1507 aa12.72□□□□□ -0.37
TRIM25-203ENST00000570473 HAP1P54257 671 aaPredicted RBP12.71□□□□□ -0.37
TRIM25-203ENST00000570473 RBM10P98175 930 aaKnown RBP12.7□□□□□ -0.38
TRIM25-203ENST00000570473 TRIM26Q12899 539 aaPredicted RBP12.68□□□□□ -0.38
TRIM25-203ENST00000570473 YTHDC1Q96MU7 727 aaKnown RBP12.68□□□□□ -0.38
TRIM25-203ENST00000570473 ZMYND15Q9H091 742 aa12.68□□□□□ -0.38
TRIM25-203ENST00000570473 PLCB2Q00722 1185 aa12.67□□□□□ -0.38
TRIM25-203ENST00000570473 TSHZ2Q9NRE2 1034 aa12.67□□□□□ -0.38
TRIM25-203ENST00000570473 DHX37Q8IY37 1157 aaKnown RBP12.66□□□□□ -0.38
TRIM25-203ENST00000570473 PCGF6Q9BYE7 350 aa12.66□□□□□ -0.38
TRIM25-203ENST00000570473 DEKP35659 375 aaKnown RBP12.61□□□□□ -0.39
TRIM25-203ENST00000570473 CCDC136Q96JN2 1154 aa12.61□□□□□ -0.39
TRIM25-203ENST00000570473 A0A0U1RQG5 324 aaPredicted RBP12.56□□□□□ -0.4
TRIM25-203ENST00000570473 PUS7Q96PZ0 661 aaKnown RBP12.51□□□□□ -0.41
TRIM25-203ENST00000570473 CCDC9Q9Y3X0 531 aaKnown RBP12.51□□□□□ -0.41
TRIM25-203ENST00000570473 IPO4Q8TEX9 1081 aaKnown RBP12.5□□□□□ -0.41
TRIM25-203ENST00000570473 TEX2Q8IWB9 1127 aa12.49□□□□□ -0.41
TRIM25-203ENST00000570473 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
TRIM25-203ENST00000570473 FANCIQ9NVI1 1328 aa12.47□□□□□ -0.41
TRIM25-203ENST00000570473 CHRM1P11229 460 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms