RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 C9orf153Q5TBE3 101 aa2.74□□□□□ -1.97
LINC00561-201ENST00000565815 COX7B2Q8TF08 81 aa2.74□□□□□ -1.97
LINC00561-201ENST00000565815 C11orf68Q9H3H3 251 aaKnown RBP2.74□□□□□ -1.97
LINC00561-201ENST00000565815 TRBV10-3A0A0K0K1G6 114 aa2.74□□□□□ -1.97
LINC00561-201ENST00000565815 JMJD7-PLA2G4BH0Y9G9 81 aa2.74□□□□□ -1.97
LINC00561-201ENST00000565815 J3KT08 172 aa2.74□□□□□ -1.97
LINC00561-201ENST00000565815 EPPK1P58107 5090 aaKnown RBP2.74□□□□□ -1.97
LINC00561-201ENST00000565815 IGHV3-73A0A0B4J1V6 119 aa2.73□□□□□ -1.97
LINC00561-201ENST00000565815 NDUFC2-KCTD14E9PQ53 114 aa2.73□□□□□ -1.97
LINC00561-201ENST00000565815 TMEM258P61165 79 aa2.73□□□□□ -1.97
LINC00561-201ENST00000565815 SOSTDC1Q6X4U4 206 aa2.73□□□□□ -1.97
LINC00561-201ENST00000565815 LINC00167Q96N53 147 aa2.73□□□□□ -1.97
LINC00561-201ENST00000565815 NDUFC2O95298 119 aa2.73□□□□□ -1.97
LINC00561-201ENST00000565815 COX6A2Q02221 97 aa2.73□□□□□ -1.97
LINC00561-201ENST00000565815 RPL18AQ02543 176 aaKnown RBP2.73□□□□□ -1.97
LINC00561-201ENST00000565815 SMIM20Q8N5G0 67 aa2.73□□□□□ -1.97
LINC00561-201ENST00000565815 SND1-IT1Q9HBX3 110 aa2.73□□□□□ -1.97
LINC00561-201ENST00000565815 SACSQ9NZJ4 4579 aa2.73□□□□□ -1.97
LINC00561-201ENST00000565815 NPC2P61916 151 aa2.72□□□□□ -1.97
LINC00561-201ENST00000565815 RNASE13Q5GAN3 156 aaKnown RBP2.72□□□□□ -1.97
LINC00561-201ENST00000565815 SORL1Q92673 2214 aa2.72□□□□□ -1.97
LINC00561-201ENST00000565815 TRGV1A0A0A0MS02 117 aa2.72□□□□□ -1.97
LINC00561-201ENST00000565815 COX17Q14061 63 aa2.72□□□□□ -1.97
LINC00561-201ENST00000565815 SERP2Q8N6R1 65 aa2.72□□□□□ -1.97
LINC00561-201ENST00000565815 SMCR5Q8TEV8 140 aa2.72□□□□□ -1.97
LINC00561-201ENST00000565815 DEFB104AQ8WTQ1 72 aa2.72□□□□□ -1.97
LINC00561-201ENST00000565815 ORMDL1Q9P0S3 153 aa2.72□□□□□ -1.97
LINC00561-201ENST00000565815 TRAV13-1A0A0B4J241 112 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 LINC00694P0DN24 101 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 HTN1P15515 57 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 PDE6GP18545 87 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 NTM-AS1Q6ZSK4 140 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 Q8IZM0 81 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 C1orf158Q8N1D5 194 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 MIR7-3HGQ8N6C7 128 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 OR13C6PQ8NH95 151 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 RETNQ9HD89 108 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 APLNQ9ULZ1 77 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 C22orf24Q9Y442 160 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 TRAV10A0A0B4J240 114 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 IGHV3OR16-9A0A0B4J2B5 98 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 hADV29S1A0JD25 119 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 TMEM256-PLSCR3K7ERE1 68 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 CCKP06307 115 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 CELA1Q9UNI1 258 aa2.71□□□□□ -1.98
LINC00561-201ENST00000565815 IGKV2-28A0A075B6P5 120 aa2.7□□□□□ -1.98
LINC00561-201ENST00000565815 TRBV6-8A0A0A6YYG3 113 aa2.7□□□□□ -1.98
LINC00561-201ENST00000565815 IGKV2D-28P01615 120 aa2.7□□□□□ -1.98
LINC00561-201ENST00000565815 DNAH10OSP0CZ25 163 aa2.7□□□□□ -1.98
LINC00561-201ENST00000565815 LINC00158P58513 81 aa2.7□□□□□ -1.98
LINC00561-201ENST00000565815 LYPD5Q6UWN5 251 aa2.7□□□□□ -1.98
LINC00561-201ENST00000565815 LINC00337Q8N6G1 96 aa2.7□□□□□ -1.98
LINC00561-201ENST00000565815 SMIM11BQ8TCY0 68 aa2.7□□□□□ -1.98
LINC00561-201ENST00000565815 C7orf33Q8WU49 177 aa2.7□□□□□ -1.98
LINC00561-201ENST00000565815 CCL18P55774 89 aa2.7□□□□□ -1.98
LINC00561-201ENST00000565815 SS18Q15532 418 aa2.7□□□□□ -1.98
LINC00561-201ENST00000565815 C5orf47Q569G3 176 aa2.7□□□□□ -1.98
LINC00561-201ENST00000565815 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
LINC00561-201ENST00000565815 XCL2Q9UBD3 114 aa2.7□□□□□ -1.98
LINC00561-201ENST00000565815 TRGV2A0A075B6R0 118 aa2.69□□□□□ -1.98
LINC00561-201ENST00000565815 TRGV4A0A0C4DH28 118 aa2.69□□□□□ -1.98
LINC00561-201ENST00000565815 SMIM9A6NGZ8 99 aa2.69□□□□□ -1.98
LINC00561-201ENST00000565815 C16orf90A8MZG2 172 aa2.69□□□□□ -1.98
LINC00561-201ENST00000565815 C1orf134Q5TEV5 83 aa2.69□□□□□ -1.98
LINC00561-201ENST00000565815 Q6ZTI0 123 aa2.69□□□□□ -1.98
LINC00561-201ENST00000565815 LOC110117498A0A087WWA1 95 aa2.69□□□□□ -1.98
LINC00561-201ENST00000565815 LINC00959A0A1B0GUT2 108 aa2.69□□□□□ -1.98
LINC00561-201ENST00000565815 LECT2O14960 151 aa2.69□□□□□ -1.98
LINC00561-201ENST00000565815 RTL8CO15255 209 aa2.69□□□□□ -1.98
LINC00561-201ENST00000565815 UBL5Q9BZL1 73 aa2.69□□□□□ -1.98
LINC00561-201ENST00000565815 NACAE9PAV3 2078 aa2.69□□□□□ -1.98
LINC00561-201ENST00000565815 PLAC8L1A1L4L8 177 aa2.68□□□□□ -1.98
LINC00561-201ENST00000565815 C6orf226Q5I0X4 101 aa2.68□□□□□ -1.98
LINC00561-201ENST00000565815 UPK3BQ9BT76 320 aa2.68□□□□□ -1.98
LINC00561-201ENST00000565815 NOP10Q9NPE3 64 aaKnown RBP2.68□□□□□ -1.98
LINC00561-201ENST00000565815 LINC00846Q9NV44 126 aa2.68□□□□□ -1.98
LINC00561-201ENST00000565815 DNAH7Q8WXX0 4024 aa2.68□□□□□ -1.98
LINC00561-201ENST00000565815 LOC107984640A0A0U1RRK4 108 aa2.68□□□□□ -1.98
LINC00561-201ENST00000565815 MIFP14174 115 aa2.68□□□□□ -1.98
LINC00561-201ENST00000565815 Q8N814 137 aa2.68□□□□□ -1.98
LINC00561-201ENST00000565815 C14orf132Q9NPU4 83 aa2.68□□□□□ -1.98
LINC00561-201ENST00000565815 TOMM7Q9P0U1 55 aa2.68□□□□□ -1.98
LINC00561-201ENST00000565815 COL7A1Q02388 2944 aa2.67□□□□□ -1.98
LINC00561-201ENST00000565815 TRBV7-6A0A0J9YX20 115 aa2.67□□□□□ -1.98
LINC00561-201ENST00000565815 ATP5EP56381 51 aaPredicted RBP2.67□□□□□ -1.98
LINC00561-201ENST00000565815 HUWE1Q7Z6Z7 4374 aaKnown RBP2.67□□□□□ -1.98
LINC00561-201ENST00000565815 NDUFC1O43677 76 aa2.67□□□□□ -1.98
LINC00561-201ENST00000565815 TRAV7A0A075B6U4 112 aa2.66□□□□□ -1.98
LINC00561-201ENST00000565815 LYRM9A8MSI8 78 aa2.66□□□□□ -1.98
LINC00561-201ENST00000565815 UBE2DNLQ8IWF7 75 aa2.66□□□□□ -1.98
LINC00561-201ENST00000565815 PRO0255Q9UI72 69 aa2.66□□□□□ -1.98
LINC00561-201ENST00000565815 STAB2Q8WWQ8 2551 aa2.66□□□□□ -1.98
LINC00561-201ENST00000565815 IGLV4-60A0A075B6I1 120 aa2.66□□□□□ -1.98
LINC00561-201ENST00000565815 GVQW2A0A096LPI5 108 aaPredicted RBP2.66□□□□□ -1.98
LINC00561-201ENST00000565815 DPH3Q96FX2 82 aa2.66□□□□□ -1.98
LINC00561-201ENST00000565815 PRM2P04554 102 aa2.65□□□□□ -1.98
LINC00561-201ENST00000565815 PFN2P35080 140 aa2.65□□□□□ -1.98
LINC00561-201ENST00000565815 RBM3P98179 157 aaKnown RBP2.65□□□□□ -1.98
LINC00561-201ENST00000565815 DEFB135Q30KP9 77 aa2.65□□□□□ -1.98
LINC00561-201ENST00000565815 LINC00575Q6W349 94 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms