RNA–Protein interactions for RNA: ENST00000561726.1

TNRC6A-208, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 4

Gene TNRC6A, Length 543 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-208ENST00000561726 CACNA1EQ15878 2313 aa1.38□□□□□ -2.19
TNRC6A-208ENST00000561726 LINC01546A6NGU7 62 aa1.38□□□□□ -2.19
TNRC6A-208ENST00000561726 K7EQZ3 153 aa1.38□□□□□ -2.19
TNRC6A-208ENST00000561726 CDKN2A-AS1Q9UH64 79 aa1.38□□□□□ -2.19
TNRC6A-208ENST00000561726 TIMM8BQ9Y5J9 83 aaPredicted RBP1.38□□□□□ -2.19
TNRC6A-208ENST00000561726 FAM208AQ9UK61 1670 aaKnown RBP1.38□□□□□ -2.19
TNRC6A-208ENST00000561726 DEFB123Q8N688 67 aa1.37□□□□□ -2.19
TNRC6A-208ENST00000561726 MRPL34Q9BQ48 92 aaKnown RBP1.37□□□□□ -2.19
TNRC6A-208ENST00000561726 FAM208BQ5VWN6 2430 aa1.37□□□□□ -2.19
TNRC6A-208ENST00000561726 SPINK4O60575 86 aa1.36□□□□□ -2.19
TNRC6A-208ENST00000561726 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.36□□□□□ -2.191e-11■■■■■ 48.9
TNRC6A-208ENST00000561726 KRTAP13-1Q8IUC0 172 aa1.36□□□□□ -2.19
TNRC6A-208ENST00000561726 CNFNQ9BYD5 112 aa1.36□□□□□ -2.19
TNRC6A-208ENST00000561726 OTOGLQ3ZCN5 2332 aa1.35□□□□□ -2.19
TNRC6A-208ENST00000561726 TRPM2O94759 1503 aa1.35□□□□□ -2.19
TNRC6A-208ENST00000561726 CNOT1A5YKK6 2376 aaKnown RBP1.35□□□□□ -2.19
TNRC6A-208ENST00000561726 DOPEY2Q9Y3R5 2298 aa1.35□□□□□ -2.19
TNRC6A-208ENST00000561726 DEPDC5O75140 1603 aa1.34□□□□□ -2.19
TNRC6A-208ENST00000561726 CCL22O00626 93 aa1.34□□□□□ -2.19
TNRC6A-208ENST00000561726 NDUFA3O95167 84 aa1.34□□□□□ -2.19
TNRC6A-208ENST00000561726 LINC00158P58513 81 aa1.34□□□□□ -2.19
TNRC6A-208ENST00000561726 COX6A2Q02221 97 aa1.34□□□□□ -2.19
TNRC6A-208ENST00000561726 SPINK9Q5DT21 86 aa1.34□□□□□ -2.19
TNRC6A-208ENST00000561726 COX6B2Q6YFQ2 88 aa1.34□□□□□ -2.19
TNRC6A-208ENST00000561726 Q8IZM0 81 aa1.34□□□□□ -2.19
TNRC6A-208ENST00000561726 HIVEP2P31629 2446 aa1.34□□□□□ -2.2
TNRC6A-208ENST00000561726 J3QKU1 62 aa1.33□□□□□ -2.2
TNRC6A-208ENST00000561726 PRO3102Q9H379 93 aa1.33□□□□□ -2.2
TNRC6A-208ENST00000561726 C10orf95Q9H7T3 257 aa1.33□□□□□ -2.2
TNRC6A-208ENST00000561726 SORL1Q92673 2214 aa1.32□□□□□ -2.2
TNRC6A-208ENST00000561726 KRTAP12-4P60329 112 aa1.32□□□□□ -2.2
TNRC6A-208ENST00000561726 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
TNRC6A-208ENST00000561726 PRO0255Q9UI72 69 aa1.32□□□□□ -2.2
TNRC6A-208ENST00000561726 COL6A6A6NMZ7 2263 aa1.32□□□□□ -2.2
TNRC6A-208ENST00000561726 TNRC6CQ9HCJ0 1690 aaKnown RBP1.32□□□□□ -2.2
TNRC6A-208ENST00000561726 TOGARAM1Q9Y4F4 1720 aa1.32□□□□□ -2.2
TNRC6A-208ENST00000561726 NFAT5O94916 1531 aa1.31□□□□□ -2.2
TNRC6A-208ENST00000561726 LOC730098B7Z3J9 87 aa1.31□□□□□ -2.2
TNRC6A-208ENST00000561726 TMEM167BQ9NRX6 74 aa1.31□□□□□ -2.2
TNRC6A-208ENST00000561726 DDX60Q8IY21 1712 aaKnown RBP1.3□□□□□ -2.2
TNRC6A-208ENST00000561726 LINC00308Q8TCZ7 52 aa1.3□□□□□ -2.2
TNRC6A-208ENST00000561726 PLCE1Q9P212 2302 aa1.3□□□□□ -2.2
TNRC6A-208ENST00000561726 LYNX1G3V0Z9 82 aa1.29□□□□□ -2.2
TNRC6A-208ENST00000561726 Q6ZSA8 131 aa1.29□□□□□ -2.2
TNRC6A-208ENST00000561726 RP1L1Q8IWN7 2480 aaPredicted RBP1.29□□□□□ -2.2
TNRC6A-208ENST00000561726 C4AP0C0L4 1744 aa1.29□□□□□ -2.2
TNRC6A-208ENST00000561726 FBN1P35555 2871 aaKnown RBP1.28□□□□□ -2.2
TNRC6A-208ENST00000561726 SNRPGP62308 76 aaKnown RBP1.28□□□□□ -2.2
TNRC6A-208ENST00000561726 ATP7AQ04656 1500 aa1.28□□□□□ -2.2
TNRC6A-208ENST00000561726 LELP1Q5T871 98 aa1.27□□□□□ -2.21
TNRC6A-208ENST00000561726 APLNQ9ULZ1 77 aa1.27□□□□□ -2.21
TNRC6A-208ENST00000561726 CDC42BPAQ5VT25 1732 aa1.26□□□□□ -2.21
TNRC6A-208ENST00000561726 H0YAA0 97 aa1.26□□□□□ -2.21
TNRC6A-208ENST00000561726 SPRR1AP35321 89 aa1.26□□□□□ -2.21
TNRC6A-208ENST00000561726 MINOS1Q5TGZ0 78 aa1.26□□□□□ -2.21
TNRC6A-208ENST00000561726 PTPRZ1P23471 2315 aaPredicted RBP1.26□□□□□ -2.21
TNRC6A-208ENST00000561726 PTPRQQ9UMZ3 2332 aa1.26□□□□□ -2.21
TNRC6A-208ENST00000561726 SAMD9LQ8IVG5 1584 aa1.25□□□□□ -2.21
TNRC6A-208ENST00000561726 A0A0D9SG42 100 aa1.25□□□□□ -2.21
TNRC6A-208ENST00000561726 Q5VSD8 79 aa1.25□□□□□ -2.21
TNRC6A-208ENST00000561726 C4BP0C0L5 1744 aa1.25□□□□□ -2.21
TNRC6A-208ENST00000561726 KIF21BO75037 1637 aa1.25□□□□□ -2.21
TNRC6A-208ENST00000561726 ROS1P08922 2347 aa1.24□□□□□ -2.21
TNRC6A-208ENST00000561726 USF3Q68DE3 2245 aa1.24□□□□□ -2.21
TNRC6A-208ENST00000561726 IQGAP1P46940 1657 aa1.24□□□□□ -2.21
TNRC6A-208ENST00000561726 PRB3Q04118 309 aaPredicted RBP1.24□□□□□ -2.21
TNRC6A-208ENST00000561726 TFF3Q07654 80 aa1.24□□□□□ -2.21
TNRC6A-208ENST00000561726 H1FX-AS1Q4G0G2 97 aa1.24□□□□□ -2.21
TNRC6A-208ENST00000561726 LMO7Q8WWI1 1683 aa1.23□□□□□ -2.21
TNRC6A-208ENST00000561726 SPRR1BP22528 89 aa1.23□□□□□ -2.21
TNRC6A-208ENST00000561726 KRTAP12-3P60328 96 aa1.23□□□□□ -2.21
TNRC6A-208ENST00000561726 WFDC13Q8IUB5 93 aa1.23□□□□□ -2.21
TNRC6A-208ENST00000561726 DEFB105AQ8NG35 78 aa1.23□□□□□ -2.21
TNRC6A-208ENST00000561726 SMIM2Q9BVW6 85 aa1.23□□□□□ -2.21
TNRC6A-208ENST00000561726 C6orf48Q9UBA6 75 aa1.23□□□□□ -2.21
TNRC6A-208ENST00000561726 C2CD3Q4AC94 2353 aa1.23□□□□□ -2.21
TNRC6A-208ENST00000561726 PIEZO2Q9H5I5 2752 aa1.23□□□□□ -2.21
TNRC6A-208ENST00000561726 WNK2Q9Y3S1 2297 aa1.2□□□□□ -2.22
TNRC6A-208ENST00000561726 IAPPP10997 89 aa1.2□□□□□ -2.22
TNRC6A-208ENST00000561726 KRTAP21-3Q3LHN1 58 aa1.2□□□□□ -2.22
TNRC6A-208ENST00000561726 SPTBN2O15020 2390 aa1.2□□□□□ -2.22
TNRC6A-208ENST00000561726 BPTFQ12830 3046 aa1.19□□□□□ -2.22
TNRC6A-208ENST00000561726 DEFB130BP0DP73 79 aa1.19□□□□□ -2.22
TNRC6A-208ENST00000561726 DEFB130AP0DP74 79 aa1.19□□□□□ -2.22
TNRC6A-208ENST00000561726 KLK9Q2XQG4 91 aa1.18□□□□□ -2.22
TNRC6A-208ENST00000561726 PKDREJQ9NTG1 2253 aa1.18□□□□□ -2.22
TNRC6A-208ENST00000561726 NDUFA1O15239 70 aa1.17□□□□□ -2.22
TNRC6A-208ENST00000561726 RPS27P42677 84 aaKnown RBP1.17□□□□□ -2.22
TNRC6A-208ENST00000561726 KRTAP10-4P60372 401 aaPredicted RBP1.17□□□□□ -2.22
TNRC6A-208ENST00000561726 RPS27LQ71UM5 84 aaKnown RBP1.17□□□□□ -2.22
TNRC6A-208ENST00000561726 CACNA1HO95180 2353 aa1.16□□□□□ -2.22
TNRC6A-208ENST00000561726 SPTBN1Q01082 2364 aaKnown RBP1.16□□□□□ -2.22
TNRC6A-208ENST00000561726 CRCT1Q9UGL9 99 aa1.15□□□□□ -2.23
TNRC6A-208ENST00000561726 ZNF462Q96JM2 2506 aa1.15□□□□□ -2.23
TNRC6A-208ENST00000561726 ASH1LQ9NR48 2969 aaKnown RBP1.14□□□□□ -2.23
TNRC6A-208ENST00000561726 MROH2BQ7Z745 1585 aa1.13□□□□□ -2.23
TNRC6A-208ENST00000561726 DUOX1Q9NRD9 1551 aa1.13□□□□□ -2.23
TNRC6A-208ENST00000561726 WT1-ASQ06250 92 aa1.12□□□□□ -2.23
TNRC6A-208ENST00000561726 WFDC10BQ8IUB3 73 aa1.12□□□□□ -2.23
TNRC6A-208ENST00000561726 ALMS1Q8TCU4 4167 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms