RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 FAM19A5Q7Z5A7 132 aaPredicted RBP12.29□□□□□ -0.44
HMBOX1-215ENST00000560599 MRPL55Q7Z7F7 128 aaKnown RBP12.29□□□□□ -0.44
HMBOX1-215ENST00000560599 FAM168BA1KXE4 195 aa12.28□□□□□ -0.44
HMBOX1-215ENST00000560599 C16orf90A8MZG2 172 aa12.28□□□□□ -0.44
HMBOX1-215ENST00000560599 DHRS4-AS1Q9P1J3 65 aa12.28□□□□□ -0.44
HMBOX1-215ENST00000560599 ETDCA0A1B0GVM5 59 aa12.27□□□□□ -0.45
HMBOX1-215ENST00000560599 SPRR1AP35321 89 aa12.27□□□□□ -0.45
HMBOX1-215ENST00000560599 Q6JHZ5 121 aa12.27□□□□□ -0.45
HMBOX1-215ENST00000560599 Q6ZQT0 140 aa12.26□□□□□ -0.45
HMBOX1-215ENST00000560599 DSCR8Q96T75 97 aa12.26□□□□□ -0.45
HMBOX1-215ENST00000560599 LINC00846Q9NV44 126 aa12.26□□□□□ -0.45
HMBOX1-215ENST00000560599 KRTAP7-1Q8IUC3 87 aa12.25□□□□□ -0.45
HMBOX1-215ENST00000560599 STAB2Q8WWQ8 2551 aa12.24□□□□□ -0.45
HMBOX1-215ENST00000560599 Q6ZRX8 168 aa12.24□□□□□ -0.45
HMBOX1-215ENST00000560599 A0A096LNI7 61 aa12.23□□□□□ -0.45
HMBOX1-215ENST00000560599 RPL37AP8A6NKH3 93 aa12.23□□□□□ -0.45
HMBOX1-215ENST00000560599 B5MCH6 92 aa12.23□□□□□ -0.45
HMBOX1-215ENST00000560599 KRTAP4-16G5E9R7 235 aaPredicted RBP12.23□□□□□ -0.45
HMBOX1-215ENST00000560599 NDUFV3P56181 108 aaKnown RBP12.22□□□□□ -0.45
HMBOX1-215ENST00000560599 ATP5EP2Q5VTU8 51 aa12.21□□□□□ -0.45
HMBOX1-215ENST00000560599 ANAPC13Q9BS18 74 aa12.21□□□□□ -0.45
HMBOX1-215ENST00000560599 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.2□□□□□ -0.46
HMBOX1-215ENST00000560599 LRCOL1A6NCL2 159 aa12.2□□□□□ -0.46
HMBOX1-215ENST00000560599 Q6ZRN7 208 aaPredicted RBP12.2□□□□□ -0.46
HMBOX1-215ENST00000560599 COL7A1Q02388 2944 aa12.19□□□□□ -0.46
HMBOX1-215ENST00000560599 IGKV2-24A0A0C4DH68 120 aa12.19□□□□□ -0.46
HMBOX1-215ENST00000560599 TRBV7-4A0A0J9YYF1 115 aa12.19□□□□□ -0.46
HMBOX1-215ENST00000560599 REG3GQ6UW15 175 aa12.19□□□□□ -0.46
HMBOX1-215ENST00000560599 UBL5Q9BZL1 73 aa12.19□□□□□ -0.46
HMBOX1-215ENST00000560599 C9orf163Q8N9P6 203 aa12.16□□□□□ -0.46
HMBOX1-215ENST00000560599 Q9BRP9 147 aa12.15□□□□□ -0.46
HMBOX1-215ENST00000560599 KRTAP21-3Q3LHN1 58 aa12.14□□□□□ -0.47
HMBOX1-215ENST00000560599 LINC00474Q9P2X8 69 aa12.14□□□□□ -0.47
HMBOX1-215ENST00000560599 IGKV3D-7A0A0C4DH55 119 aa12.12□□□□□ -0.47
HMBOX1-215ENST00000560599 FAM236AA0A1B0GUQ0 79 aa12.12□□□□□ -0.47
HMBOX1-215ENST00000560599 FAM236BA0A1B0GV22 79 aa12.12□□□□□ -0.47
HMBOX1-215ENST00000560599 A0A1W2PNN7 141 aa12.12□□□□□ -0.47
HMBOX1-215ENST00000560599 UBE2BP63146 152 aa12.12□□□□□ -0.47
HMBOX1-215ENST00000560599 IGLV5-48A0A075B6I7 105 aa12.11□□□□□ -0.47
HMBOX1-215ENST00000560599 Q8N377 158 aa12.11□□□□□ -0.47
HMBOX1-215ENST00000560599 LINC01547P58512 204 aaPredicted RBP12.1□□□□□ -0.47
HMBOX1-215ENST00000560599 DEFB105AQ8NG35 78 aa12.1□□□□□ -0.47
HMBOX1-215ENST00000560599 M0R2N4 97 aa12.09□□□□□ -0.47
HMBOX1-215ENST00000560599 PLECQ15149 4684 aaKnown RBP12.07□□□□□ -0.48
HMBOX1-215ENST00000560599 DNAH7Q8WXX0 4024 aa12.07□□□□□ -0.48
HMBOX1-215ENST00000560599 CHTF8P0CG12 524 aa12.07□□□□□ -0.48
HMBOX1-215ENST00000560599 A0A087WTM6 91 aa12.06□□□□□ -0.48
HMBOX1-215ENST00000560599 Q6ZR54 194 aa12.05□□□□□ -0.48
HMBOX1-215ENST00000560599 FAM19A1Q7Z5A9 133 aa12.05□□□□□ -0.48
HMBOX1-215ENST00000560599 HIST1H4AP62805 103 aaKnown RBP12.04□□□□□ -0.48
HMBOX1-215ENST00000560599 Q6ZVQ6 151 aa12.04□□□□□ -0.48
HMBOX1-215ENST00000560599 VPS13DQ5THJ4 4388 aa12.04□□□□□ -0.48
HMBOX1-215ENST00000560599 ST20-AS1Q8NBB2 130 aa12.03□□□□□ -0.48
HMBOX1-215ENST00000560599 ERC2-IT1O76042 136 aa12.03□□□□□ -0.48
HMBOX1-215ENST00000560599 PHF5AQ7RTV0 110 aaKnown RBP12.03□□□□□ -0.48
HMBOX1-215ENST00000560599 ATOX1O00244 68 aa12.02□□□□□ -0.49
HMBOX1-215ENST00000560599 A0A1B0GW54 56 aa12.01□□□□□ -0.49
HMBOX1-215ENST00000560599 TNP2Q05952 138 aa12.01□□□□□ -0.49
HMBOX1-215ENST00000560599 DNAH10Q8IVF4 4471 aa12□□□□□ -0.49
HMBOX1-215ENST00000560599 H0Y9J4 135 aa12□□□□□ -0.49
HMBOX1-215ENST00000560599 CXCL6P80162 114 aa12□□□□□ -0.49
HMBOX1-215ENST00000560599 SPACA4Q8TDM5 124 aa11.99□□□□□ -0.49
HMBOX1-215ENST00000560599 PRKDCP78527 4128 aaKnown RBP11.99□□□□□ -0.49
HMBOX1-215ENST00000560599 CSMD3Q7Z407 3707 aa11.98□□□□□ -0.49
HMBOX1-215ENST00000560599 F8WEM9 126 aa11.98□□□□□ -0.49
HMBOX1-215ENST00000560599 PRLHP81277 87 aa11.98□□□□□ -0.49
HMBOX1-215ENST00000560599 FUSP35637 526 aaKnown RBP eCLIP11.97□□□□□ -0.49
HMBOX1-215ENST00000560599 STARD9Q9P2P6 4700 aa11.97□□□□□ -0.49
HMBOX1-215ENST00000560599 MEGF8Q7Z7M0 2845 aa11.97□□□□□ -0.49
HMBOX1-215ENST00000560599 HAMPP81172 84 aa11.96□□□□□ -0.49
HMBOX1-215ENST00000560599 LYSTQ99698 3801 aa11.96□□□□□ -0.49
HMBOX1-215ENST00000560599 EPM2AB3EWF7 344 aa11.95□□□□□ -0.5
HMBOX1-215ENST00000560599 RTL8CO15255 209 aa11.95□□□□□ -0.5
HMBOX1-215ENST00000560599 C1orf137Q5JT78 98 aa11.95□□□□□ -0.5
HMBOX1-215ENST00000560599 C1orf134Q5TEV5 83 aa11.95□□□□□ -0.5
HMBOX1-215ENST00000560599 C3orf22Q8N5N4 141 aa11.95□□□□□ -0.5
HMBOX1-215ENST00000560599 A0A087WVE0 104 aa11.94□□□□□ -0.5
HMBOX1-215ENST00000560599 HIGD2AQ9BW72 106 aa11.94□□□□□ -0.5
HMBOX1-215ENST00000560599 UBE2AP49459 152 aa11.94□□□□□ -0.5
HMBOX1-215ENST00000560599 BCE1O60756 84 aa11.93□□□□□ -0.5
HMBOX1-215ENST00000560599 Q8NBF4 154 aa11.93□□□□□ -0.5
HMBOX1-215ENST00000560599 CCDC179H3BU77 68 aa11.92□□□□□ -0.5
HMBOX1-215ENST00000560599 SMIM29Q86T20 159 aa11.92□□□□□ -0.5
HMBOX1-215ENST00000560599 DPH3Q96FX2 82 aa11.92□□□□□ -0.5
HMBOX1-215ENST00000560599 WWC2-AS2Q96NR7 200 aa11.92□□□□□ -0.5
HMBOX1-215ENST00000560599 PANO1I0J062 215 aa11.91□□□□□ -0.5
HMBOX1-215ENST00000560599 LY6G6CO95867 125 aa11.91□□□□□ -0.5
HMBOX1-215ENST00000560599 KRTAP11-1Q8IUC1 163 aa11.91□□□□□ -0.5
HMBOX1-215ENST00000560599 DNHD1Q96M86 4753 aa11.91□□□□□ -0.5
HMBOX1-215ENST00000560599 NREPQ16612 68 aa11.9□□□□□ -0.5
HMBOX1-215ENST00000560599 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.9□□□□□ -0.5
HMBOX1-215ENST00000560599 SPRR1BP22528 89 aa11.89□□□□□ -0.51
HMBOX1-215ENST00000560599 LINC00476Q8WZB0 136 aa11.89□□□□□ -0.51
HMBOX1-215ENST00000560599 A0A1W2PNM2 257 aa11.88□□□□□ -0.51
HMBOX1-215ENST00000560599 IGLV8-61A0A075B6I0 122 aa11.87□□□□□ -0.51
HMBOX1-215ENST00000560599 C3orf84H3BNL1 204 aa11.87□□□□□ -0.51
HMBOX1-215ENST00000560599 UQCRQO14949 82 aa11.87□□□□□ -0.51
HMBOX1-215ENST00000560599 SPRR4Q96PI1 79 aa11.87□□□□□ -0.51
HMBOX1-215ENST00000560599 IGLV5-52A0A0A0MRZ9 124 aa11.86□□□□□ -0.51
HMBOX1-215ENST00000560599 COX7CP15954 63 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms