RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 CEP250Q9BV73 2442 aa3.35□□□□□ -1.87
PCNX1-214ENST00000556849 SPEGQ15772 3267 aa3.35□□□□□ -1.87
PCNX1-214ENST00000556849 PRUNE2Q8WUY3 3088 aa3.35□□□□□ -1.87
PCNX1-214ENST00000556849 RTL8CO15255 209 aa3.35□□□□□ -1.87
PCNX1-214ENST00000556849 SPINK7P58062 85 aa3.35□□□□□ -1.87
PCNX1-214ENST00000556849 CASC10Q5T4H9 136 aa3.35□□□□□ -1.87
PCNX1-214ENST00000556849 CAMK2N2Q96S95 79 aa3.35□□□□□ -1.87
PCNX1-214ENST00000556849 SPTBN1Q01082 2364 aaKnown RBP3.35□□□□□ -1.87
PCNX1-214ENST00000556849 KALRNO60229 2985 aa3.35□□□□□ -1.87
PCNX1-214ENST00000556849 CR1P17927 2039 aa3.34□□□□□ -1.87
PCNX1-214ENST00000556849 A8MWP4 228 aa3.34□□□□□ -1.87
PCNX1-214ENST00000556849 IGLV1-51P01701 117 aa3.34□□□□□ -1.87
PCNX1-214ENST00000556849 KRTAP26-1Q6PEX3 210 aa3.34□□□□□ -1.87
PCNX1-214ENST00000556849 Q6ZR54 194 aa3.34□□□□□ -1.87
PCNX1-214ENST00000556849 WFDC13Q8IUB5 93 aa3.34□□□□□ -1.87
PCNX1-214ENST00000556849 DEFB105AQ8NG35 78 aa3.34□□□□□ -1.87
PCNX1-214ENST00000556849 IGLV1-50A0A075B6I6 118 aa3.33□□□□□ -1.88
PCNX1-214ENST00000556849 DEFB130BP0DP73 79 aa3.33□□□□□ -1.88
PCNX1-214ENST00000556849 DEFB130AP0DP74 79 aa3.33□□□□□ -1.88
PCNX1-214ENST00000556849 SPATA8Q6RVD6 105 aa3.33□□□□□ -1.88
PCNX1-214ENST00000556849 RETNLBQ9BQ08 111 aa3.33□□□□□ -1.88
PCNX1-214ENST00000556849 CNOT1A5YKK6 2376 aaKnown RBP3.32□□□□□ -1.88
PCNX1-214ENST00000556849 DSPP15924 2871 aaKnown RBP3.32□□□□□ -1.88
PCNX1-214ENST00000556849 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
PCNX1-214ENST00000556849 CHTF8P0CG12 524 aa3.32□□□□□ -1.88
PCNX1-214ENST00000556849 SPAG11AQ6PDA7 123 aa3.32□□□□□ -1.88
PCNX1-214ENST00000556849 IGFL1Q6UW32 110 aa3.32□□□□□ -1.88
PCNX1-214ENST00000556849 WFDC10BQ8IUB3 73 aa3.32□□□□□ -1.88
PCNX1-214ENST00000556849 CCL19Q99731 98 aa3.32□□□□□ -1.88
PCNX1-214ENST00000556849 GPR179Q6PRD1 2367 aa3.32□□□□□ -1.88
PCNX1-214ENST00000556849 WDFY4Q6ZS81 3184 aa3.32□□□□□ -1.88
PCNX1-214ENST00000556849 TPRP12270 2363 aaKnown RBP3.31□□□□□ -1.88
PCNX1-214ENST00000556849 HRES1P13985 223 aa3.31□□□□□ -1.88
PCNX1-214ENST00000556849 C15orf56Q8N910 161 aa3.31□□□□□ -1.88
PCNX1-214ENST00000556849 LINC00472Q9H8W2 130 aa3.31□□□□□ -1.88
PCNX1-214ENST00000556849 MAP1BP46821 2468 aaKnown RBP3.31□□□□□ -1.88
PCNX1-214ENST00000556849 PCNX1Q96RV3 2341 aa3.31□□□□□ -1.88
PCNX1-214ENST00000556849 MMP24-AS1A0A0U1RRL7 71 aa3.3□□□□□ -1.88
PCNX1-214ENST00000556849 H3BNG1 76 aa3.3□□□□□ -1.88
PCNX1-214ENST00000556849 PRB2P02812 416 aaPredicted RBP3.3□□□□□ -1.88
PCNX1-214ENST00000556849 SPRR1BP22528 89 aa3.3□□□□□ -1.88
PCNX1-214ENST00000556849 ANKHD1Q8IWZ3 2542 aaKnown RBP3.29□□□□□ -1.88
PCNX1-214ENST00000556849 EP300Q09472 2414 aaPredicted RBP3.29□□□□□ -1.88
PCNX1-214ENST00000556849 APC2O95996 2303 aa3.29□□□□□ -1.88
PCNX1-214ENST00000556849 A0A096LPF7 62 aa3.29□□□□□ -1.88
PCNX1-214ENST00000556849 H0Y9J4 135 aa3.29□□□□□ -1.88
PCNX1-214ENST00000556849 DCHS1Q96JQ0 3298 aa3.28□□□□□ -1.88
PCNX1-214ENST00000556849 WNK1Q9H4A3 2382 aa3.28□□□□□ -1.88
PCNX1-214ENST00000556849 A0A087WSZ3 146 aa3.28□□□□□ -1.88
PCNX1-214ENST00000556849 IGKV2-24A0A0C4DH68 120 aa3.28□□□□□ -1.88
PCNX1-214ENST00000556849 DEFB116Q30KQ4 102 aa3.28□□□□□ -1.88
PCNX1-214ENST00000556849 DMXL2Q8TDJ6 3036 aa3.27□□□□□ -1.89
PCNX1-214ENST00000556849 PIEZO2Q9H5I5 2752 aa3.27□□□□□ -1.89
PCNX1-214ENST00000556849 ACYP2P14621 99 aa3.26□□□□□ -1.89
PCNX1-214ENST00000556849 ABCA2Q9BZC7 2435 aa3.26□□□□□ -1.89
PCNX1-214ENST00000556849 MYO15AQ9UKN7 3530 aa3.26□□□□□ -1.89
PCNX1-214ENST00000556849 MGAQ8IWI9 3026 aa3.26□□□□□ -1.89
PCNX1-214ENST00000556849 RP1L1Q8IWN7 2480 aaPredicted RBP3.26□□□□□ -1.89
PCNX1-214ENST00000556849 SORL1Q92673 2214 aa3.25□□□□□ -1.89
PCNX1-214ENST00000556849 COL6A6A6NMZ7 2263 aa3.25□□□□□ -1.89
PCNX1-214ENST00000556849 UQCR11O14957 56 aa3.25□□□□□ -1.89
PCNX1-214ENST00000556849 SPART-AS1P0CW21 52 aa3.25□□□□□ -1.89
PCNX1-214ENST00000556849 RPL37AP61513 92 aaKnown RBP3.25□□□□□ -1.89
PCNX1-214ENST00000556849 PCOTHQ58A44 107 aa3.25□□□□□ -1.89
PCNX1-214ENST00000556849 ADM2Q7Z4H4 148 aa3.25□□□□□ -1.89
PCNX1-214ENST00000556849 CAMK2N1Q7Z7J9 78 aa3.25□□□□□ -1.89
PCNX1-214ENST00000556849 CACNA1HO95180 2353 aa3.24□□□□□ -1.89
PCNX1-214ENST00000556849 DMDP11532 3685 aa3.24□□□□□ -1.89
PCNX1-214ENST00000556849 CELSR3Q9NYQ7 3312 aa3.24□□□□□ -1.89
PCNX1-214ENST00000556849 PTPRZ1P23471 2315 aaPredicted RBP3.23□□□□□ -1.89
PCNX1-214ENST00000556849 MIR22HGQ0VDD5 57 aa3.23□□□□□ -1.89
PCNX1-214ENST00000556849 KRTAP24-1Q3LI83 254 aa3.23□□□□□ -1.89
PCNX1-214ENST00000556849 LINC01556Q5JQF7 62 aa3.23□□□□□ -1.89
PCNX1-214ENST00000556849 SMG1Q96Q15 3661 aaKnown RBP3.23□□□□□ -1.89
PCNX1-214ENST00000556849 C8orf17Q9NRJ1 99 aa3.23□□□□□ -1.89
PCNX1-214ENST00000556849 A0A1B0GU69 56 aa3.22□□□□□ -1.89
PCNX1-214ENST00000556849 CSAG1Q6PB30 78 aa3.22□□□□□ -1.89
PCNX1-214ENST00000556849 KRTAP7-1Q8IUC3 87 aa3.22□□□□□ -1.89
PCNX1-214ENST00000556849 DMAC1Q96GE9 116 aa3.22□□□□□ -1.89
PCNX1-214ENST00000556849 SPENQ96T58 3664 aaKnown RBP3.21□□□□□ -1.9
PCNX1-214ENST00000556849 IGHV6-1A0A0B4J1U7 121 aa3.21□□□□□ -1.9
PCNX1-214ENST00000556849 MRPL34Q9BQ48 92 aaKnown RBP3.21□□□□□ -1.9
PCNX1-214ENST00000556849 AKAP13Q12802 2813 aa3.21□□□□□ -1.9
PCNX1-214ENST00000556849 TACC2O95359 2948 aa3.21□□□□□ -1.9
PCNX1-214ENST00000556849 ZNF861PO60384 105 aa3.2□□□□□ -1.9
PCNX1-214ENST00000556849 KRTAP13-3Q3SY46 172 aa3.2□□□□□ -1.9
PCNX1-214ENST00000556849 CSMD1Q96PZ7 3565 aa3.2□□□□□ -1.9
PCNX1-214ENST00000556849 ZDBF2Q9HCK1 2354 aa3.19□□□□□ -1.9
PCNX1-214ENST00000556849 CEP290O15078 2479 aa3.19□□□□□ -1.9
PCNX1-214ENST00000556849 A0A1B0GVX0 72 aa3.19□□□□□ -1.9
PCNX1-214ENST00000556849 FAM168BA1KXE4 195 aa3.19□□□□□ -1.9
PCNX1-214ENST00000556849 ROMO1P60602 79 aa3.19□□□□□ -1.9
PCNX1-214ENST00000556849 C1orf134Q5TEV5 83 aa3.19□□□□□ -1.9
PCNX1-214ENST00000556849 DEFB123Q8N688 67 aa3.19□□□□□ -1.9
PCNX1-214ENST00000556849 Q96NJ1 140 aa3.19□□□□□ -1.9
PCNX1-214ENST00000556849 TRIOBPQ9H2D6 2365 aa3.19□□□□□ -1.9
PCNX1-214ENST00000556849 PRRC2CQ9Y520 2896 aaKnown RBP3.19□□□□□ -1.9
PCNX1-214ENST00000556849 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.19□□□□□ -1.99e-8■■■■■ 29.1
PCNX1-214ENST00000556849 DNAH10OSP0CZ25 163 aa3.18□□□□□ -1.9
PCNX1-214ENST00000556849 ADGRG4Q8IZF6 3080 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms