RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 SYCNQ0VAF6 134 aa7.92□□□□□ -1.14
XRCC3-208ENST00000554811 NREPQ16612 68 aa7.92□□□□□ -1.14
XRCC3-208ENST00000554811 UBE2BP63146 152 aa7.92□□□□□ -1.14
XRCC3-208ENST00000554811 RMI2Q96E14 147 aa7.92□□□□□ -1.14
XRCC3-208ENST00000554811 KMT2BQ9UMN6 2715 aaPredicted RBP7.92□□□□□ -1.14
XRCC3-208ENST00000554811 MPLKIPQ8TAP9 179 aa7.91□□□□□ -1.14
XRCC3-208ENST00000554811 CRYGAP11844 174 aa7.91□□□□□ -1.14
XRCC3-208ENST00000554811 OBSCN-AS1Q96MR7 158 aa7.91□□□□□ -1.14
XRCC3-208ENST00000554811 ETDCA0A1B0GVM5 59 aa7.9□□□□□ -1.14
XRCC3-208ENST00000554811 Q6ZRP5 223 aa7.9□□□□□ -1.14
XRCC3-208ENST00000554811 IGLV6-57P01721 117 aa7.89□□□□□ -1.15
XRCC3-208ENST00000554811 FAM168BA1KXE4 195 aa7.89□□□□□ -1.15
XRCC3-208ENST00000554811 M0R378 163 aa7.89□□□□□ -1.15
XRCC3-208ENST00000554811 BPY2O14599 106 aa7.89□□□□□ -1.15
XRCC3-208ENST00000554811 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.88□□□□□ -1.15
XRCC3-208ENST00000554811 A0A096LNI7 61 aa7.88□□□□□ -1.15
XRCC3-208ENST00000554811 NDUFC2-KCTD14E9PQ53 114 aa7.88□□□□□ -1.15
XRCC3-208ENST00000554811 A0A0G2JQZ4 141 aa7.88□□□□□ -1.15
XRCC3-208ENST00000554811 A0A1W2PNN7 141 aa7.88□□□□□ -1.15
XRCC3-208ENST00000554811 KRTAP10-11P60412 298 aa7.88□□□□□ -1.15
XRCC3-208ENST00000554811 ATP5EP2Q5VTU8 51 aa7.88□□□□□ -1.15
XRCC3-208ENST00000554811 F8WEM9 126 aa7.87□□□□□ -1.15
XRCC3-208ENST00000554811 TMEM258P61165 79 aa7.87□□□□□ -1.15
XRCC3-208ENST00000554811 PRR34Q9NV39 138 aa7.87□□□□□ -1.15
XRCC3-208ENST00000554811 TENM2Q9NT68 2774 aa7.87□□□□□ -1.15
XRCC3-208ENST00000554811 VPREB1P12018 145 aa7.87□□□□□ -1.15
XRCC3-208ENST00000554811 EGFEM1PQ0D2K5 195 aa7.87□□□□□ -1.15
XRCC3-208ENST00000554811 DEFB116Q30KQ4 102 aa7.87□□□□□ -1.15
XRCC3-208ENST00000554811 TM2D3Q9BRN9 247 aa7.87□□□□□ -1.15
XRCC3-208ENST00000554811 OXTP01178 125 aa7.86□□□□□ -1.15
XRCC3-208ENST00000554811 SERTAD4-AS1Q5TG53 156 aa7.86□□□□□ -1.15
XRCC3-208ENST00000554811 C4orf48Q5BLP8 95 aa7.86□□□□□ -1.15
XRCC3-208ENST00000554811 CASC10Q5T4H9 136 aa7.86□□□□□ -1.15
XRCC3-208ENST00000554811 C15orf56Q8N910 161 aa7.85□□□□□ -1.15
XRCC3-208ENST00000554811 ST20-AS1Q8NBB2 130 aa7.84□□□□□ -1.15
XRCC3-208ENST00000554811 C7orf33Q8WU49 177 aa7.84□□□□□ -1.15
XRCC3-208ENST00000554811 HIGD2AQ9BW72 106 aa7.84□□□□□ -1.15
XRCC3-208ENST00000554811 LINC00167Q96N53 147 aa7.84□□□□□ -1.15
XRCC3-208ENST00000554811 ELOF1P60002 83 aaKnown RBP7.83□□□□□ -1.16
XRCC3-208ENST00000554811 PRR4Q16378 134 aa7.83□□□□□ -1.16
XRCC3-208ENST00000554811 MRPL55Q7Z7F7 128 aaKnown RBP7.83□□□□□ -1.16
XRCC3-208ENST00000554811 FAM30AQ9NZY2 134 aa7.82□□□□□ -1.16
XRCC3-208ENST00000554811 FUSP35637 526 aaKnown RBP eCLIP7.82□□□□□ -1.16
XRCC3-208ENST00000554811 PDE6GP18545 87 aa7.81□□□□□ -1.16
XRCC3-208ENST00000554811 LRCOL1A6NCL2 159 aa7.81□□□□□ -1.16
XRCC3-208ENST00000554811 TRAV7A0A075B6U4 112 aa7.8□□□□□ -1.16
XRCC3-208ENST00000554811 LOC110117498A0A087WWA1 95 aa7.79□□□□□ -1.16
XRCC3-208ENST00000554811 Q5XG85 94 aa7.79□□□□□ -1.16
XRCC3-208ENST00000554811 KRTAP24-1Q3LI83 254 aa7.78□□□□□ -1.16
XRCC3-208ENST00000554811 PRLHP81277 87 aa7.78□□□□□ -1.16
XRCC3-208ENST00000554811 PMAIP1Q13794 54 aa7.78□□□□□ -1.16
XRCC3-208ENST00000554811 LINC00528Q8N1L1 170 aa7.77□□□□□ -1.16
XRCC3-208ENST00000554811 CSMD3Q7Z407 3707 aa7.77□□□□□ -1.17
XRCC3-208ENST00000554811 GVQW2A0A096LPI5 108 aaPredicted RBP7.76□□□□□ -1.17
XRCC3-208ENST00000554811 C1orf137Q5JT78 98 aa7.76□□□□□ -1.17
XRCC3-208ENST00000554811 SRRM2Q9UQ35 2752 aaKnown RBP7.76□□□□□ -1.17
XRCC3-208ENST00000554811 RPS28P62857 69 aaKnown RBP7.76□□□□□ -1.17
XRCC3-208ENST00000554811 WFDC13Q8IUB5 93 aa7.75□□□□□ -1.17
XRCC3-208ENST00000554811 LINC00474Q9P2X8 69 aa7.75□□□□□ -1.17
XRCC3-208ENST00000554811 TRBV7-4A0A0J9YYF1 115 aa7.75□□□□□ -1.17
XRCC3-208ENST00000554811 LINC00588Q9Y4M8 146 aa7.75□□□□□ -1.17
XRCC3-208ENST00000554811 LINC01556Q5JQF7 62 aa7.74□□□□□ -1.17
XRCC3-208ENST00000554811 Q8N377 158 aa7.74□□□□□ -1.17
XRCC3-208ENST00000554811 ERC2-IT1O76042 136 aa7.73□□□□□ -1.17
XRCC3-208ENST00000554811 TMEM254Q8TBM7 123 aa7.73□□□□□ -1.17
XRCC3-208ENST00000554811 SMIM29Q86T20 159 aa7.73□□□□□ -1.17
XRCC3-208ENST00000554811 CXCL6P80162 114 aa7.73□□□□□ -1.17
XRCC3-208ENST00000554811 H7BZZ5 65 aa7.72□□□□□ -1.17
XRCC3-208ENST00000554811 H3BQ85 93 aa7.71□□□□□ -1.18
XRCC3-208ENST00000554811 CHTF8P0CG12 524 aa7.71□□□□□ -1.18
XRCC3-208ENST00000554811 H3BS24 57 aa7.7□□□□□ -1.18
XRCC3-208ENST00000554811 KRTAP26-1Q6PEX3 210 aa7.7□□□□□ -1.18
XRCC3-208ENST00000554811 Q6ZRX8 168 aa7.69□□□□□ -1.18
XRCC3-208ENST00000554811 Q9BRP9 147 aa7.68□□□□□ -1.18
XRCC3-208ENST00000554811 DHRS4-AS1Q9P1J3 65 aa7.68□□□□□ -1.18
XRCC3-208ENST00000554811 A0A087WSZ3 146 aa7.68□□□□□ -1.18
XRCC3-208ENST00000554811 SPTSSBQ8NFR3 76 aa7.67□□□□□ -1.18
XRCC3-208ENST00000554811 IGKV4-1P06312 121 aa7.67□□□□□ -1.18
XRCC3-208ENST00000554811 RPL37AP61513 92 aaKnown RBP7.66□□□□□ -1.18
XRCC3-208ENST00000554811 A0A1W2PNM2 257 aa7.66□□□□□ -1.18
XRCC3-208ENST00000554811 REG3GQ6UW15 175 aa7.66□□□□□ -1.18
XRCC3-208ENST00000554811 UBE2AP49459 152 aa7.66□□□□□ -1.18
XRCC3-208ENST00000554811 KCNQ1DNQ9H478 68 aa7.66□□□□□ -1.18
XRCC3-208ENST00000554811 TRBV7-6A0A0J9YX20 115 aa7.65□□□□□ -1.18
XRCC3-208ENST00000554811 PRYO14603 147 aa7.65□□□□□ -1.18
XRCC3-208ENST00000554811 K7EQZ3 153 aa7.65□□□□□ -1.19
XRCC3-208ENST00000554811 SERP1Q9Y6X1 66 aa7.65□□□□□ -1.19
XRCC3-208ENST00000554811 COL7A1Q02388 2944 aa7.64□□□□□ -1.19
XRCC3-208ENST00000554811 H3BNG1 76 aa7.64□□□□□ -1.19
XRCC3-208ENST00000554811 IGLV1-50A0A075B6I6 118 aa7.63□□□□□ -1.19
XRCC3-208ENST00000554811 DNAH10OSP0CZ25 163 aa7.63□□□□□ -1.19
XRCC3-208ENST00000554811 LINC00476Q8WZB0 136 aa7.63□□□□□ -1.19
XRCC3-208ENST00000554811 SMIM26A0A096LP01 95 aa7.63□□□□□ -1.19
XRCC3-208ENST00000554811 PHF5AQ7RTV0 110 aaKnown RBP7.62□□□□□ -1.19
XRCC3-208ENST00000554811 H0Y9J4 135 aa7.62□□□□□ -1.19
XRCC3-208ENST00000554811 KLKP1Q107X0 134 aa7.61□□□□□ -1.19
XRCC3-208ENST00000554811 Q8NBF4 154 aa7.6□□□□□ -1.19
XRCC3-208ENST00000554811 IGLV9-49A0A0B4J1Y8 123 aa7.59□□□□□ -1.19
XRCC3-208ENST00000554811 K7EIL1 84 aa7.58□□□□□ -1.2
XRCC3-208ENST00000554811 PSPHP1O15172 72 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms