RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 FAM236BA0A1B0GV22 79 aa12.18□□□□□ -0.46
LRP1-204ENST00000553277 PDE6GP18545 87 aa12.18□□□□□ -0.46
LRP1-204ENST00000553277 COX7BP24311 80 aa12.18□□□□□ -0.46
LRP1-204ENST00000553277 ELOF1P60002 83 aaKnown RBP12.18□□□□□ -0.46
LRP1-204ENST00000553277 LY6G6CO95867 125 aa12.17□□□□□ -0.46
LRP1-204ENST00000553277 SYCNQ0VAF6 134 aa12.17□□□□□ -0.46
LRP1-204ENST00000553277 ATP5EP2Q5VTU8 51 aa12.17□□□□□ -0.46
LRP1-204ENST00000553277 Q6ZRN7 208 aaPredicted RBP12.17□□□□□ -0.46
LRP1-204ENST00000553277 HIST1H4AP62805 103 aaKnown RBP12.16□□□□□ -0.46
LRP1-204ENST00000553277 RBM3P98179 157 aaKnown RBP12.16□□□□□ -0.46
LRP1-204ENST00000553277 TLX1NBP0CAT3 122 aa12.16□□□□□ -0.46
LRP1-204ENST00000553277 ALMS1Q8TCU4 4167 aa12.15□□□□□ -0.46
LRP1-204ENST00000553277 DNAH6Q9C0G6 4158 aa12.14□□□□□ -0.47
LRP1-204ENST00000553277 Q6ZQY7 126 aa12.13□□□□□ -0.47
LRP1-204ENST00000553277 PLA2G2DQ9UNK4 145 aa12.13□□□□□ -0.47
LRP1-204ENST00000553277 Q6ZQT0 140 aa12.13□□□□□ -0.47
LRP1-204ENST00000553277 CCDC179H3BU77 68 aa12.12□□□□□ -0.47
LRP1-204ENST00000553277 Q6ZRP5 223 aa12.12□□□□□ -0.47
LRP1-204ENST00000553277 USP17L23D6RBM5 183 aa12.1□□□□□ -0.47
LRP1-204ENST00000553277 M0R2N4 97 aa12.1□□□□□ -0.47
LRP1-204ENST00000553277 LAMTOR3Q9UHA4 124 aa12.1□□□□□ -0.47
LRP1-204ENST00000553277 LINC00528Q8N1L1 170 aa12.1□□□□□ -0.47
LRP1-204ENST00000553277 ATOX1O00244 68 aa12.09□□□□□ -0.47
LRP1-204ENST00000553277 DSCR8Q96T75 97 aa12.08□□□□□ -0.48
LRP1-204ENST00000553277 UBL5Q9BZL1 73 aa12.08□□□□□ -0.48
LRP1-204ENST00000553277 KCNQ1DNQ9H478 68 aa12.08□□□□□ -0.48
LRP1-204ENST00000553277 LRCOL1A6NCL2 159 aa12.07□□□□□ -0.48
LRP1-204ENST00000553277 B5MCH6 92 aa12.07□□□□□ -0.48
LRP1-204ENST00000553277 PSCAO43653 123 aa12.07□□□□□ -0.48
LRP1-204ENST00000553277 IGLV5-37A0A075B6J1 123 aa12.06□□□□□ -0.48
LRP1-204ENST00000553277 IGKV3D-7A0A0C4DH55 119 aa12.06□□□□□ -0.48
LRP1-204ENST00000553277 DNAH10Q8IVF4 4471 aa12.05□□□□□ -0.48
LRP1-204ENST00000553277 LCE6AA0A183 80 aa12.05□□□□□ -0.48
LRP1-204ENST00000553277 UQCRQO14949 82 aa12.05□□□□□ -0.48
LRP1-204ENST00000553277 C1orf134Q5TEV5 83 aa12.05□□□□□ -0.48
LRP1-204ENST00000553277 TRBV7-4A0A0J9YYF1 115 aa12.03□□□□□ -0.48
LRP1-204ENST00000553277 C14orf177Q52M58 125 aa12.03□□□□□ -0.48
LRP1-204ENST00000553277 C3orf22Q8N5N4 141 aa12.03□□□□□ -0.48
LRP1-204ENST00000553277 NKAPP1Q8N9T2 125 aa12.03□□□□□ -0.48
LRP1-204ENST00000553277 CNBPP62633 177 aaKnown RBP12□□□□□ -0.49
LRP1-204ENST00000553277 COX7CP15954 63 aa12□□□□□ -0.49
LRP1-204ENST00000553277 C7orf33Q8WU49 177 aa12□□□□□ -0.49
LRP1-204ENST00000553277 PRYO14603 147 aa11.98□□□□□ -0.49
LRP1-204ENST00000553277 SERTAD4-AS1Q5TG53 156 aa11.98□□□□□ -0.49
LRP1-204ENST00000553277 DNAH2Q9P225 4427 aa11.98□□□□□ -0.49
LRP1-204ENST00000553277 A0A087WTM6 91 aa11.97□□□□□ -0.49
LRP1-204ENST00000553277 DHRS4-AS1Q9P1J3 65 aa11.96□□□□□ -0.5
LRP1-204ENST00000553277 RTL8CO15255 209 aa11.95□□□□□ -0.5
LRP1-204ENST00000553277 SPRR1AP35321 89 aa11.95□□□□□ -0.5
LRP1-204ENST00000553277 SACSQ9NZJ4 4579 aa11.95□□□□□ -0.5
LRP1-204ENST00000553277 LOC107984640A0A0U1RRK4 108 aa11.94□□□□□ -0.5
LRP1-204ENST00000553277 CXCL6P80162 114 aa11.94□□□□□ -0.5
LRP1-204ENST00000553277 IGLV1-50A0A075B6I6 118 aa11.94□□□□□ -0.5
LRP1-204ENST00000553277 BCE1O60756 84 aa11.94□□□□□ -0.5
LRP1-204ENST00000553277 SERP2Q8N6R1 65 aa11.94□□□□□ -0.5
LRP1-204ENST00000553277 KRTAP4-16G5E9R7 235 aaPredicted RBP11.93□□□□□ -0.5
LRP1-204ENST00000553277 CRYGAP11844 174 aa11.93□□□□□ -0.5
LRP1-204ENST00000553277 C9orf153Q5TBE3 101 aa11.93□□□□□ -0.5
LRP1-204ENST00000553277 Q6ZVQ6 151 aa11.93□□□□□ -0.5
LRP1-204ENST00000553277 SS18L2Q9UHA2 77 aa11.93□□□□□ -0.5
LRP1-204ENST00000553277 A0A087WVE0 104 aa11.92□□□□□ -0.5
LRP1-204ENST00000553277 Q6ZRX8 168 aa11.91□□□□□ -0.5
LRP1-204ENST00000553277 HYDINQ4G0P3 5121 aa11.91□□□□□ -0.5
LRP1-204ENST00000553277 LINC01547P58512 204 aaPredicted RBP11.91□□□□□ -0.5
LRP1-204ENST00000553277 FRAS1Q86XX4 4008 aa11.9□□□□□ -0.5
LRP1-204ENST00000553277 DNAH17Q9UFH2 4485 aa11.89□□□□□ -0.51
LRP1-204ENST00000553277 A0A1B0GW54 56 aa11.89□□□□□ -0.51
LRP1-204ENST00000553277 TNP2Q05952 138 aa11.88□□□□□ -0.51
LRP1-204ENST00000553277 C9orf163Q8N9P6 203 aa11.88□□□□□ -0.51
LRP1-204ENST00000553277 IGLV5-48A0A075B6I7 105 aa11.87□□□□□ -0.51
LRP1-204ENST00000553277 FAM19A1Q7Z5A9 133 aa11.87□□□□□ -0.51
LRP1-204ENST00000553277 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.86□□□□□ -0.51
LRP1-204ENST00000553277 MRPL55Q7Z7F7 128 aaKnown RBP11.86□□□□□ -0.51
LRP1-204ENST00000553277 KRTAP7-1Q8IUC3 87 aa11.86□□□□□ -0.51
LRP1-204ENST00000553277 ETDCA0A1B0GVM5 59 aa11.85□□□□□ -0.51
LRP1-204ENST00000553277 Q8N377 158 aa11.85□□□□□ -0.51
LRP1-204ENST00000553277 KMT2CQ8NEZ4 4911 aaKnown RBP11.84□□□□□ -0.51
LRP1-204ENST00000553277 FAM168BA1KXE4 195 aa11.84□□□□□ -0.51
LRP1-204ENST00000553277 HAMPP81172 84 aa11.84□□□□□ -0.51
LRP1-204ENST00000553277 HECTD4Q9Y4D8 3996 aa11.83□□□□□ -0.51
LRP1-204ENST00000553277 SMIM20Q8N5G0 67 aa11.82□□□□□ -0.52
LRP1-204ENST00000553277 Q9BRP9 147 aa11.82□□□□□ -0.52
LRP1-204ENST00000553277 PKIGQ9Y2B9 76 aa11.82□□□□□ -0.52
LRP1-204ENST00000553277 RPL37AP8A6NKH3 93 aa11.81□□□□□ -0.52
LRP1-204ENST00000553277 LINC00336Q6ZUF6 198 aa11.81□□□□□ -0.52
LRP1-204ENST00000553277 C16orf90A8MZG2 172 aa11.8□□□□□ -0.52
LRP1-204ENST00000553277 FAT2Q9NYQ8 4349 aa11.79□□□□□ -0.52
LRP1-204ENST00000553277 REG3GQ6UW15 175 aa11.78□□□□□ -0.52
LRP1-204ENST00000553277 FAM19A5Q7Z5A7 132 aaPredicted RBP11.78□□□□□ -0.52
LRP1-204ENST00000553277 RYR2Q92736 4967 aa11.76□□□□□ -0.53
LRP1-204ENST00000553277 A0A096LNI7 61 aa11.75□□□□□ -0.53
LRP1-204ENST00000553277 DEFB105AQ8NG35 78 aa11.75□□□□□ -0.53
LRP1-204ENST00000553277 TRAV7A0A075B6U4 112 aa11.75□□□□□ -0.53
LRP1-204ENST00000553277 IGLV5-52A0A0A0MRZ9 124 aa11.75□□□□□ -0.53
LRP1-204ENST00000553277 KRTAP10-2P60368 255 aa11.74□□□□□ -0.53
LRP1-204ENST00000553277 LINC00474Q9P2X8 69 aa11.74□□□□□ -0.53
LRP1-204ENST00000553277 FUSP35637 526 aaKnown RBP eCLIP11.73□□□□□ -0.53
LRP1-204ENST00000553277 NREPQ16612 68 aa11.73□□□□□ -0.53
LRP1-204ENST00000553277 DNAH11Q96DT5 4516 aa11.73□□□□□ -0.53
LRP1-204ENST00000553277 TMEM258P61165 79 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms