RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 TRAV21A0A0B4J279 112 aa3.33□□□□□ -1.88
PFDN5-219ENST00000553171 IGIPA6NJ69 53 aa3.33□□□□□ -1.88
PFDN5-219ENST00000553171 I3L3M4 83 aa3.33□□□□□ -1.88
PFDN5-219ENST00000553171 M0R3E3 92 aa3.33□□□□□ -1.88
PFDN5-219ENST00000553171 LY6HO94772 140 aa3.33□□□□□ -1.88
PFDN5-219ENST00000553171 RNASE1P07998 156 aaKnown RBP3.33□□□□□ -1.88
PFDN5-219ENST00000553171 PRR4Q16378 134 aa3.33□□□□□ -1.88
PFDN5-219ENST00000553171 NREPQ16612 68 aa3.33□□□□□ -1.88
PFDN5-219ENST00000553171 C10orf55Q5SWW7 151 aa3.33□□□□□ -1.88
PFDN5-219ENST00000553171 FAM74A4Q5TZK3 123 aa3.33□□□□□ -1.88
PFDN5-219ENST00000553171 HEATR1Q9H583 2144 aaKnown RBP3.33□□□□□ -1.88
PFDN5-219ENST00000553171 ZNF580Q9UK33 172 aa3.33□□□□□ -1.88
PFDN5-219ENST00000553171 S4R3C0 116 aa3.33□□□□□ -1.88
PFDN5-219ENST00000553171 HMCN2Q8NDA2 5059 aa3.33□□□□□ -1.88
PFDN5-219ENST00000553171 A0A0J9YXY3 114 aa3.32□□□□□ -1.88
PFDN5-219ENST00000553171 DNAJC9-AS1A6NH13 148 aa3.32□□□□□ -1.88
PFDN5-219ENST00000553171 TFF1P04155 84 aa3.32□□□□□ -1.88
PFDN5-219ENST00000553171 CCL3L1P16619 93 aa3.32□□□□□ -1.88
PFDN5-219ENST00000553171 EGFEM1PQ0D2K5 195 aa3.32□□□□□ -1.88
PFDN5-219ENST00000553171 REG3GQ6UW15 175 aa3.32□□□□□ -1.88
PFDN5-219ENST00000553171 ENHOQ6UWT2 76 aa3.32□□□□□ -1.88
PFDN5-219ENST00000553171 C2orf66Q6UXQ4 117 aa3.32□□□□□ -1.88
PFDN5-219ENST00000553171 PKHD1P08F94 4074 aa3.31□□□□□ -1.88
PFDN5-219ENST00000553171 IGLV5-52A0A0A0MRZ9 124 aa3.31□□□□□ -1.88
PFDN5-219ENST00000553171 TRBV6-5A0A0K0K1A5 114 aa3.31□□□□□ -1.88
PFDN5-219ENST00000553171 CLPSL1A2RUU4 121 aa3.31□□□□□ -1.88
PFDN5-219ENST00000553171 A8MU10 97 aa3.31□□□□□ -1.88
PFDN5-219ENST00000553171 KRTAP4-16G5E9R7 235 aaPredicted RBP3.31□□□□□ -1.88
PFDN5-219ENST00000553171 PRAC1Q96KF2 57 aa3.31□□□□□ -1.88
PFDN5-219ENST00000553171 PRR15LQ9BU68 103 aa3.31□□□□□ -1.88
PFDN5-219ENST00000553171 FAT4Q6V0I7 4981 aa3.3□□□□□ -1.88
PFDN5-219ENST00000553171 IGKV2-40A0A087WW87 121 aaPredicted RBP3.3□□□□□ -1.88
PFDN5-219ENST00000553171 TRAV12-3A0A0B4J271 114 aa3.3□□□□□ -1.88
PFDN5-219ENST00000553171 IGHV7-4-1A0A0J9YVY3 117 aa3.3□□□□□ -1.88
PFDN5-219ENST00000553171 JMJD7-PLA2G4BH0Y9G9 81 aa3.3□□□□□ -1.88
PFDN5-219ENST00000553171 NDUFB1O75438 58 aa3.3□□□□□ -1.88
PFDN5-219ENST00000553171 IGKV2D-40P01614 121 aaPredicted RBP3.3□□□□□ -1.88
PFDN5-219ENST00000553171 CTSGP08311 255 aa3.3□□□□□ -1.88
PFDN5-219ENST00000553171 CMC4P56277 68 aaPredicted RBP3.3□□□□□ -1.88
PFDN5-219ENST00000553171 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
PFDN5-219ENST00000553171 Q8N9P0 234 aaPredicted RBP3.3□□□□□ -1.88
PFDN5-219ENST00000553171 Q8NDZ9 215 aa3.3□□□□□ -1.88
PFDN5-219ENST00000553171 Q9BRP9 147 aa3.3□□□□□ -1.88
PFDN5-219ENST00000553171 C8orf17Q9NRJ1 99 aa3.3□□□□□ -1.88
PFDN5-219ENST00000553171 C22orf24Q9Y442 160 aa3.3□□□□□ -1.88
PFDN5-219ENST00000553171 IGLV5-37A0A075B6J1 123 aa3.29□□□□□ -1.88
PFDN5-219ENST00000553171 H3BUA1 57 aa3.29□□□□□ -1.88
PFDN5-219ENST00000553171 FSHBP01225 129 aa3.29□□□□□ -1.88
PFDN5-219ENST00000553171 POLR2KP53803 58 aaKnown RBP3.29□□□□□ -1.88
PFDN5-219ENST00000553171 LYPD2Q6UXB3 125 aa3.29□□□□□ -1.88
PFDN5-219ENST00000553171 OCR1Q9BZK8 76 aa3.29□□□□□ -1.88
PFDN5-219ENST00000553171 C14orf132Q9NPU4 83 aa3.29□□□□□ -1.88
PFDN5-219ENST00000553171 ALMS1Q8TCU4 4167 aa3.29□□□□□ -1.88
PFDN5-219ENST00000553171 HSPG2P98160 4391 aa3.29□□□□□ -1.88
PFDN5-219ENST00000553171 ODF3BA8MYP8 253 aa3.28□□□□□ -1.88
PFDN5-219ENST00000553171 PROK1P58294 105 aa3.28□□□□□ -1.88
PFDN5-219ENST00000553171 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.28□□□□□ -1.88
PFDN5-219ENST00000553171 USMG5Q96IX5 58 aa3.28□□□□□ -1.88
PFDN5-219ENST00000553171 AMELXQ99217 191 aa3.28□□□□□ -1.88
PFDN5-219ENST00000553171 ORMDL1Q9P0S3 153 aa3.28□□□□□ -1.88
PFDN5-219ENST00000553171 HUWE1Q7Z6Z7 4374 aaKnown RBP3.28□□□□□ -1.89
PFDN5-219ENST00000553171 IGLV1-50A0A075B6I6 118 aa3.27□□□□□ -1.89
PFDN5-219ENST00000553171 IGHV3-49A0A0A0MS15 119 aa3.27□□□□□ -1.89
PFDN5-219ENST00000553171 RPL37AP8A6NKH3 93 aa3.27□□□□□ -1.89
PFDN5-219ENST00000553171 NDUFA4O00483 81 aa3.27□□□□□ -1.89
PFDN5-219ENST00000553171 KRTAP10-11P60412 298 aa3.27□□□□□ -1.89
PFDN5-219ENST00000553171 RNASE13Q5GAN3 156 aaKnown RBP3.27□□□□□ -1.89
PFDN5-219ENST00000553171 C9orf66Q5T8R8 295 aa3.27□□□□□ -1.89
PFDN5-219ENST00000553171 Q8TAT8 98 aa3.27□□□□□ -1.89
PFDN5-219ENST00000553171 CHCHD7Q9BUK0 85 aa3.27□□□□□ -1.89
PFDN5-219ENST00000553171 ZNRD1Q9P1U0 126 aa3.27□□□□□ -1.89
PFDN5-219ENST00000553171 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.27□□□□□ -1.89
PFDN5-219ENST00000553171 IGLV4-69A0A075B6H9 119 aa3.26□□□□□ -1.89
PFDN5-219ENST00000553171 IGHV3OR16-8A0A075B7F1 116 aa3.26□□□□□ -1.89
PFDN5-219ENST00000553171 A0A087WSZ3 146 aa3.26□□□□□ -1.89
PFDN5-219ENST00000553171 IGHV3-73A0A0B4J1V6 119 aa3.26□□□□□ -1.89
PFDN5-219ENST00000553171 TRAV10A0A0B4J240 114 aa3.26□□□□□ -1.89
PFDN5-219ENST00000553171 A8MWP4 228 aa3.26□□□□□ -1.89
PFDN5-219ENST00000553171 BPY2O14599 106 aa3.26□□□□□ -1.89
PFDN5-219ENST00000553171 LECT2O14960 151 aa3.26□□□□□ -1.89
PFDN5-219ENST00000553171 RTL8CO15255 209 aa3.26□□□□□ -1.89
PFDN5-219ENST00000553171 Q6ZQT0 140 aa3.26□□□□□ -1.89
PFDN5-219ENST00000553171 ADM2Q7Z4H4 148 aa3.26□□□□□ -1.89
PFDN5-219ENST00000553171 DYNC1H1Q14204 4646 aaKnown RBP3.26□□□□□ -1.89
PFDN5-219ENST00000553171 DNAH11Q96DT5 4516 aa3.25□□□□□ -1.89
PFDN5-219ENST00000553171 H0YGX0 51 aa3.25□□□□□ -1.89
PFDN5-219ENST00000553171 APELAP0DMC3 54 aa3.25□□□□□ -1.89
PFDN5-219ENST00000553171 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
PFDN5-219ENST00000553171 C14orf178Q8N769 122 aaPredicted RBP3.25□□□□□ -1.89
PFDN5-219ENST00000553171 KLHL30-AS1Q8NEE0 82 aa3.25□□□□□ -1.89
PFDN5-219ENST00000553171 LINC01006Q8NI28 216 aa3.25□□□□□ -1.89
PFDN5-219ENST00000553171 ARFGEF3Q5TH69 2177 aa3.25□□□□□ -1.89
PFDN5-219ENST00000553171 NACAE9PAV3 2078 aa3.24□□□□□ -1.89
PFDN5-219ENST00000553171 IGLV8-61A0A075B6I0 122 aa3.24□□□□□ -1.89
PFDN5-219ENST00000553171 MGPP08493 103 aa3.24□□□□□ -1.89
PFDN5-219ENST00000553171 PDE6GP18545 87 aa3.24□□□□□ -1.89
PFDN5-219ENST00000553171 CAMK2N1Q7Z7J9 78 aa3.24□□□□□ -1.89
PFDN5-219ENST00000553171 Q8N1X5 172 aa3.24□□□□□ -1.89
PFDN5-219ENST00000553171 SPANXA2-OT1Q8N9U9 137 aa3.24□□□□□ -1.89
PFDN5-219ENST00000553171 Q8N9W7 124 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 228 ms