RNA–Protein interactions for RNA: ENST00000550236.1

ATXN2-220, Transcript of ataxin 2, humanhuman

TSL 5

Gene ATXN2, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-220ENST00000550236 HIST2H2BEQ16778 126 aa4.93□□□□□ -1.62
ATXN2-220ENST00000550236 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.93□□□□□ -1.62
ATXN2-220ENST00000550236 SFTA2Q6UW10 78 aa4.93□□□□□ -1.62
ATXN2-220ENST00000550236 HIST1H2BHQ93079 126 aa4.93□□□□□ -1.62
ATXN2-220ENST00000550236 HIST1H2BNQ99877 126 aa4.93□□□□□ -1.62
ATXN2-220ENST00000550236 HIST1H2BMQ99879 126 aa4.93□□□□□ -1.62
ATXN2-220ENST00000550236 HIGD2AQ9BW72 106 aa4.93□□□□□ -1.62
ATXN2-220ENST00000550236 MAP1LC3CQ9BXW4 147 aa4.93□□□□□ -1.62
ATXN2-220ENST00000550236 J3QQQ9 107 aa4.92□□□□□ -1.62
ATXN2-220ENST00000550236 CRYGAP11844 174 aa4.92□□□□□ -1.62
ATXN2-220ENST00000550236 LGALS3P17931 250 aaKnown RBP4.92□□□□□ -1.62
ATXN2-220ENST00000550236 PLNP26678 52 aa4.92□□□□□ -1.62
ATXN2-220ENST00000550236 HERVK_113P61574 105 aa4.92□□□□□ -1.62
ATXN2-220ENST00000550236 JOSD1Q15040 202 aaPredicted RBP4.92□□□□□ -1.62
ATXN2-220ENST00000550236 KRTAP13-2Q52LG2 175 aa4.92□□□□□ -1.62
ATXN2-220ENST00000550236 PLEKHB2Q96CS7 222 aa4.92□□□□□ -1.62
ATXN2-220ENST00000550236 LPAP08519 4548 aa4.9□□□□□ -1.62
ATXN2-220ENST00000550236 TRBV10-3A0A0K0K1G6 114 aa4.9□□□□□ -1.63
ATXN2-220ENST00000550236 SYS1-DBNDD2H3BUS1 97 aa4.9□□□□□ -1.63
ATXN2-220ENST00000550236 SIGMAR1Q99720 223 aa4.9□□□□□ -1.63
ATXN2-220ENST00000550236 PPDPFQ9H3Y8 114 aa4.9□□□□□ -1.63
ATXN2-220ENST00000550236 SS18L2Q9UHA2 77 aa4.9□□□□□ -1.63
ATXN2-220ENST00000550236 IGKV2D-26A0A0A0MRZ7 120 aa4.89□□□□□ -1.63
ATXN2-220ENST00000550236 ADAMTSL4-AS1Q5T5F5 129 aa4.89□□□□□ -1.63
ATXN2-220ENST00000550236 SMIM20Q8N5G0 67 aa4.89□□□□□ -1.63
ATXN2-220ENST00000550236 C3orf22Q8N5N4 141 aa4.89□□□□□ -1.63
ATXN2-220ENST00000550236 SMCR5Q8TEV8 140 aa4.89□□□□□ -1.63
ATXN2-220ENST00000550236 RETNLBQ9BQ08 111 aa4.89□□□□□ -1.63
ATXN2-220ENST00000550236 A0A0J9YXY3 114 aa4.88□□□□□ -1.63
ATXN2-220ENST00000550236 ETDCA0A1B0GVM5 59 aa4.88□□□□□ -1.63
ATXN2-220ENST00000550236 KRTDAPP60985 99 aa4.88□□□□□ -1.63
ATXN2-220ENST00000550236 SOSTDC1Q6X4U4 206 aa4.88□□□□□ -1.63
ATXN2-220ENST00000550236 MIEN1Q9BRT3 115 aa4.88□□□□□ -1.63
ATXN2-220ENST00000550236 KRTAP4-8Q9BYQ9 185 aa4.88□□□□□ -1.63
ATXN2-220ENST00000550236 TTTY13Q9BZ97 58 aa4.88□□□□□ -1.63
ATXN2-220ENST00000550236 LRP2P98164 4655 aa4.87□□□□□ -1.63
ATXN2-220ENST00000550236 E9PLD3 99 aa4.87□□□□□ -1.63
ATXN2-220ENST00000550236 PRYO14603 147 aa4.87□□□□□ -1.63
ATXN2-220ENST00000550236 C3orf79P0CE67 100 aa4.87□□□□□ -1.63
ATXN2-220ENST00000550236 HIST3H2BBQ8N257 126 aa4.87□□□□□ -1.63
ATXN2-220ENST00000550236 NMUP48645 174 aa4.86□□□□□ -1.63
ATXN2-220ENST00000550236 S100A7L2Q5SY68 101 aa4.86□□□□□ -1.63
ATXN2-220ENST00000550236 ATOH7Q8N100 152 aa4.86□□□□□ -1.63
ATXN2-220ENST00000550236 LINC00304Q8N9R0 145 aa4.86□□□□□ -1.63
ATXN2-220ENST00000550236 SPRR4Q96PI1 79 aa4.86□□□□□ -1.63
ATXN2-220ENST00000550236 KCNQ1DNQ9H478 68 aa4.86□□□□□ -1.63
ATXN2-220ENST00000550236 ERC2-IT1O76042 136 aa4.85□□□□□ -1.63
ATXN2-220ENST00000550236 BATFQ16520 125 aa4.85□□□□□ -1.63
ATXN2-220ENST00000550236 FAM229BQ4G0N7 80 aa4.85□□□□□ -1.63
ATXN2-220ENST00000550236 LINC01545Q5VT33 79 aa4.85□□□□□ -1.63
ATXN2-220ENST00000550236 KRTAP19-1Q8IUB9 90 aa4.85□□□□□ -1.63
ATXN2-220ENST00000550236 ZNF815PA8K554 130 aa4.84□□□□□ -1.63
ATXN2-220ENST00000550236 B5MCH6 92 aa4.84□□□□□ -1.63
ATXN2-220ENST00000550236 KRTAP4-16G5E9R7 235 aaPredicted RBP4.84□□□□□ -1.63
ATXN2-220ENST00000550236 J3QR89 54 aa4.84□□□□□ -1.63
ATXN2-220ENST00000550236 SPRR1AP35321 89 aa4.84□□□□□ -1.63
ATXN2-220ENST00000550236 GAGE2AQ6NT46 116 aa4.84□□□□□ -1.63
ATXN2-220ENST00000550236 GTF2H5Q6ZYL4 71 aa4.84□□□□□ -1.63
ATXN2-220ENST00000550236 LINC00337Q8N6G1 96 aa4.84□□□□□ -1.63
ATXN2-220ENST00000550236 OR13C6PQ8NH95 151 aa4.84□□□□□ -1.63
ATXN2-220ENST00000550236 SPANXB1Q9NS25 103 aaPredicted RBP4.84□□□□□ -1.63
ATXN2-220ENST00000550236 LOC107984156A0A0G2JMH3 177 aa4.83□□□□□ -1.64
ATXN2-220ENST00000550236 ARL17AQ8IVW1 177 aa4.83□□□□□ -1.64
ATXN2-220ENST00000550236 LINC00308Q8TCZ7 52 aa4.83□□□□□ -1.64
ATXN2-220ENST00000550236 KRTAP4-12Q9BQ66 201 aa4.83□□□□□ -1.64
ATXN2-220ENST00000550236 V9GYY9 64 aa4.83□□□□□ -1.64
ATXN2-220ENST00000550236 TRAV23DV6A0A075B6W5 121 aa4.82□□□□□ -1.64
ATXN2-220ENST00000550236 IGLV9-49A0A0B4J1Y8 123 aa4.82□□□□□ -1.64
ATXN2-220ENST00000550236 TRBV10-2A0A0K0K1G8 114 aa4.82□□□□□ -1.64
ATXN2-220ENST00000550236 LITAFQ99732 161 aa4.82□□□□□ -1.64
ATXN2-220ENST00000550236 Q9BRP9 147 aa4.82□□□□□ -1.64
ATXN2-220ENST00000550236 ZNF706Q9Y5V0 76 aaPredicted RBP4.82□□□□□ -1.64
ATXN2-220ENST00000550236 NDUFC2O95298 119 aa4.81□□□□□ -1.64
ATXN2-220ENST00000550236 IGLV6-57P01721 117 aa4.81□□□□□ -1.64
ATXN2-220ENST00000550236 COA6Q5JTJ3 125 aaKnown RBP4.81□□□□□ -1.64
ATXN2-220ENST00000550236 ST20-AS1Q8NBB2 130 aa4.81□□□□□ -1.64
ATXN2-220ENST00000550236 Q8NBF4 154 aa4.81□□□□□ -1.64
ATXN2-220ENST00000550236 SPANXCQ9NY87 97 aa4.81□□□□□ -1.64
ATXN2-220ENST00000550236 MOBPQ13875 183 aa4.8□□□□□ -1.64
ATXN2-220ENST00000550236 SCGB1D4Q6XE38 83 aa4.8□□□□□ -1.64
ATXN2-220ENST00000550236 HIST1H2BLQ99880 126 aa4.8□□□□□ -1.64
ATXN2-220ENST00000550236 KRTAP9-2Q9BYQ4 174 aa4.8□□□□□ -1.64
ATXN2-220ENST00000550236 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
ATXN2-220ENST00000550236 ZNF73O43830 326 aaPredicted RBP4.79□□□□□ -1.64
ATXN2-220ENST00000550236 Q6ZRX8 168 aa4.79□□□□□ -1.64
ATXN2-220ENST00000550236 PCP2Q8IVA1 136 aa4.79□□□□□ -1.64
ATXN2-220ENST00000550236 RNF213Q63HN8 5207 aa4.79□□□□□ -1.64
ATXN2-220ENST00000550236 IGLV7-46A0A075B6I9 117 aa4.78□□□□□ -1.64
ATXN2-220ENST00000550236 TIMM17BO60830 172 aa4.78□□□□□ -1.64
ATXN2-220ENST00000550236 C9orf118A6NHY6 69 aa4.77□□□□□ -1.65
ATXN2-220ENST00000550236 HINT1P49773 126 aaPredicted RBP4.77□□□□□ -1.65
ATXN2-220ENST00000550236 LINC00483Q53H64 154 aa4.77□□□□□ -1.65
ATXN2-220ENST00000550236 C9orf153Q5TBE3 101 aa4.77□□□□□ -1.65
ATXN2-220ENST00000550236 MUSTN1Q8IVN3 82 aa4.77□□□□□ -1.65
ATXN2-220ENST00000550236 ANAPC13Q9BS18 74 aa4.77□□□□□ -1.65
ATXN2-220ENST00000550236 UQCR10Q9UDW1 63 aa4.77□□□□□ -1.65
ATXN2-220ENST00000550236 KRTAP9-6A0A140TA67 174 aa4.76□□□□□ -1.65
ATXN2-220ENST00000550236 A6NDN8 102 aa4.76□□□□□ -1.65
ATXN2-220ENST00000550236 HSD52Q0P140 79 aa4.76□□□□□ -1.65
ATXN2-220ENST00000550236 DEFB105AQ8NG35 78 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms