RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 IGLV1-50A0A075B6I6 118 aa12.25□□□□□ -0.45
BRF1-215ENST00000549655 ACYP1P07311 99 aa12.25□□□□□ -0.45
BRF1-215ENST00000549655 MRPL55Q7Z7F7 128 aaKnown RBP12.25□□□□□ -0.45
BRF1-215ENST00000549655 FBN3Q75N90 2809 aa12.24□□□□□ -0.45
BRF1-215ENST00000549655 IGKV2-24A0A0C4DH68 120 aa12.24□□□□□ -0.45
BRF1-215ENST00000549655 PCP4P48539 62 aa12.24□□□□□ -0.45
BRF1-215ENST00000549655 GAGE2AQ6NT46 116 aa12.24□□□□□ -0.45
BRF1-215ENST00000549655 JMJD7-PLA2G4BH0Y9G9 81 aa12.23□□□□□ -0.45
BRF1-215ENST00000549655 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.23□□□□□ -0.45
BRF1-215ENST00000549655 PRYO14603 147 aa12.21□□□□□ -0.45
BRF1-215ENST00000549655 H3BQ85 93 aa12.21□□□□□ -0.46
BRF1-215ENST00000549655 VPS13DQ5THJ4 4388 aa12.2□□□□□ -0.46
BRF1-215ENST00000549655 C9orf163Q8N9P6 203 aa12.19□□□□□ -0.46
BRF1-215ENST00000549655 LAMTOR3Q9UHA4 124 aa12.19□□□□□ -0.46
BRF1-215ENST00000549655 A0A1W2PNN7 141 aa12.18□□□□□ -0.46
BRF1-215ENST00000549655 KRTAP4-16G5E9R7 235 aaPredicted RBP12.18□□□□□ -0.46
BRF1-215ENST00000549655 SPRR1AP35321 89 aa12.18□□□□□ -0.46
BRF1-215ENST00000549655 Q6ZR54 194 aa12.18□□□□□ -0.46
BRF1-215ENST00000549655 GHRHP01286 108 aa12.17□□□□□ -0.46
BRF1-215ENST00000549655 ETDCA0A1B0GVM5 59 aa12.16□□□□□ -0.46
BRF1-215ENST00000549655 B5MCH6 92 aa12.16□□□□□ -0.46
BRF1-215ENST00000549655 CHTF8P0CG12 524 aa12.16□□□□□ -0.46
BRF1-215ENST00000549655 Q6ZRX8 168 aa12.16□□□□□ -0.46
BRF1-215ENST00000549655 RBM3P98179 157 aaKnown RBP12.15□□□□□ -0.46
BRF1-215ENST00000549655 CCKP06307 115 aa12.14□□□□□ -0.47
BRF1-215ENST00000549655 SCGB1A1P11684 91 aa12.14□□□□□ -0.47
BRF1-215ENST00000549655 SMCR5Q8TEV8 140 aa12.14□□□□□ -0.47
BRF1-215ENST00000549655 SDIM1Q6ZPB5 146 aa12.14□□□□□ -0.47
BRF1-215ENST00000549655 A0A087WTM6 91 aa12.13□□□□□ -0.47
BRF1-215ENST00000549655 C21orf62-AS1Q17RA5 79 aa12.13□□□□□ -0.47
BRF1-215ENST00000549655 PKIGQ9Y2B9 76 aa12.13□□□□□ -0.47
BRF1-215ENST00000549655 REG3GQ6UW15 175 aa12.12□□□□□ -0.47
BRF1-215ENST00000549655 DHRS4-AS1Q9P1J3 65 aa12.12□□□□□ -0.47
BRF1-215ENST00000549655 Q9BRP9 147 aa12.12□□□□□ -0.47
BRF1-215ENST00000549655 TGP01266 2768 aa12.11□□□□□ -0.47
BRF1-215ENST00000549655 LY6G6CO95867 125 aa12.1□□□□□ -0.47
BRF1-215ENST00000549655 WWC2-AS2Q96NR7 200 aa12.1□□□□□ -0.47
BRF1-215ENST00000549655 NDUFV3P56181 108 aaKnown RBP12.09□□□□□ -0.47
BRF1-215ENST00000549655 LINC00643Q86TS7 51 aa12.09□□□□□ -0.47
BRF1-215ENST00000549655 LINC00846Q9NV44 126 aa12.09□□□□□ -0.47
BRF1-215ENST00000549655 LOC110117498A0A087WWA1 95 aa12.08□□□□□ -0.48
BRF1-215ENST00000549655 Q6ZQT0 140 aa12.08□□□□□ -0.48
BRF1-215ENST00000549655 DSCR8Q96T75 97 aa12.08□□□□□ -0.48
BRF1-215ENST00000549655 LINC00474Q9P2X8 69 aa12.08□□□□□ -0.48
BRF1-215ENST00000549655 KMT2AQ03164 3969 aa12.08□□□□□ -0.48
BRF1-215ENST00000549655 DEFB105AQ8NG35 78 aa12.07□□□□□ -0.48
BRF1-215ENST00000549655 C1orf134Q5TEV5 83 aa12.06□□□□□ -0.48
BRF1-215ENST00000549655 PHF5AQ7RTV0 110 aaKnown RBP12.06□□□□□ -0.48
BRF1-215ENST00000549655 PANO1I0J062 215 aa12.05□□□□□ -0.48
BRF1-215ENST00000549655 UBE2BP63146 152 aa12.05□□□□□ -0.48
BRF1-215ENST00000549655 Q8N377 158 aa12.04□□□□□ -0.48
BRF1-215ENST00000549655 LINC01547P58512 204 aaPredicted RBP12.03□□□□□ -0.48
BRF1-215ENST00000549655 LINC00476Q8WZB0 136 aa12.03□□□□□ -0.48
BRF1-215ENST00000549655 ERC2-IT1O76042 136 aa12.03□□□□□ -0.48
BRF1-215ENST00000549655 PDE6GP18545 87 aa12.03□□□□□ -0.48
BRF1-215ENST00000549655 FUSP35637 526 aaKnown RBP eCLIP12.03□□□□□ -0.482e-6■■■□□ 19.1
BRF1-215ENST00000549655 Q6Q795 121 aa12.02□□□□□ -0.49
BRF1-215ENST00000549655 DPH3Q96FX2 82 aa12.02□□□□□ -0.49
BRF1-215ENST00000549655 TRBV7-4A0A0J9YYF1 115 aa12.01□□□□□ -0.49
BRF1-215ENST00000549655 KRTAP11-1Q8IUC1 163 aa12.01□□□□□ -0.49
BRF1-215ENST00000549655 ST20-AS1Q8NBB2 130 aa12.01□□□□□ -0.49
BRF1-215ENST00000549655 TRBV7-7A0A0K0K1E9 115 aa12.01□□□□□ -0.49
BRF1-215ENST00000549655 RTL8CO15255 209 aa12.01□□□□□ -0.49
BRF1-215ENST00000549655 FAM19A1Q7Z5A9 133 aa12.01□□□□□ -0.49
BRF1-215ENST00000549655 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12□□□□□ -0.49
BRF1-215ENST00000549655 SPACA4Q8TDM5 124 aa11.99□□□□□ -0.49
BRF1-215ENST00000549655 PRLHP81277 87 aa11.99□□□□□ -0.49
BRF1-215ENST00000549655 IGLV5-48A0A075B6I7 105 aa11.98□□□□□ -0.49
BRF1-215ENST00000549655 C3orf22Q8N5N4 141 aa11.96□□□□□ -0.5
BRF1-215ENST00000549655 IMUPQ9GZP8 106 aa11.96□□□□□ -0.5
BRF1-215ENST00000549655 DNAH2Q9P225 4427 aa11.94□□□□□ -0.5
BRF1-215ENST00000549655 C3orf84H3BNL1 204 aa11.94□□□□□ -0.5
BRF1-215ENST00000549655 Q6JHZ5 121 aa11.94□□□□□ -0.5
BRF1-215ENST00000549655 IGLV5-52A0A0A0MRZ9 124 aa11.93□□□□□ -0.5
BRF1-215ENST00000549655 EPM2AB3EWF7 344 aa11.93□□□□□ -0.5
BRF1-215ENST00000549655 HIGD2AQ9BW72 106 aa11.93□□□□□ -0.5
BRF1-215ENST00000549655 UBL5Q9BZL1 73 aa11.93□□□□□ -0.5
BRF1-215ENST00000549655 IGKV3D-7A0A0C4DH55 119 aa11.92□□□□□ -0.5
BRF1-215ENST00000549655 TNP2Q05952 138 aa11.92□□□□□ -0.5
BRF1-215ENST00000549655 HECTD4Q9Y4D8 3996 aa11.91□□□□□ -0.5
BRF1-215ENST00000549655 H0Y9J4 135 aa11.9□□□□□ -0.5
BRF1-215ENST00000549655 UBE2AP49459 152 aa11.88□□□□□ -0.51
BRF1-215ENST00000549655 DNAH6Q9C0G6 4158 aa11.88□□□□□ -0.51
BRF1-215ENST00000549655 BCE1O60756 84 aa11.87□□□□□ -0.51
BRF1-215ENST00000549655 SMIM29Q86T20 159 aa11.86□□□□□ -0.51
BRF1-215ENST00000549655 Q6ZVQ6 151 aa11.85□□□□□ -0.51
BRF1-215ENST00000549655 ATP5EP2Q5VTU8 51 aa11.85□□□□□ -0.51
BRF1-215ENST00000549655 DNAH17Q9UFH2 4485 aa11.84□□□□□ -0.51
BRF1-215ENST00000549655 PLAC8Q9NZF1 115 aa11.84□□□□□ -0.51
BRF1-215ENST00000549655 ALMS1Q8TCU4 4167 aa11.84□□□□□ -0.51
BRF1-215ENST00000549655 C1orf137Q5JT78 98 aa11.83□□□□□ -0.52
BRF1-215ENST00000549655 ANAPC13Q9BS18 74 aa11.83□□□□□ -0.52
BRF1-215ENST00000549655 FAM236AA0A1B0GUQ0 79 aa11.82□□□□□ -0.52
BRF1-215ENST00000549655 FAM236BA0A1B0GV22 79 aa11.82□□□□□ -0.52
BRF1-215ENST00000549655 KRTAP13-1Q8IUC0 172 aa11.81□□□□□ -0.52
BRF1-215ENST00000549655 F8WEM9 126 aa11.8□□□□□ -0.52
BRF1-215ENST00000549655 KRTAP10-2P60368 255 aa11.79□□□□□ -0.52
BRF1-215ENST00000549655 HAMPP81172 84 aa11.79□□□□□ -0.52
BRF1-215ENST00000549655 A0A1W2PNM2 257 aa11.79□□□□□ -0.52
BRF1-215ENST00000549655 HIST1H4AP62805 103 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms