RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 AKAP13Q12802 2813 aa-0.52□□□□□ -2.49
LEMD3-206ENST00000545026 RGPD8O14715 1765 aaPredicted RBP-0.52□□□□□ -2.49
LEMD3-206ENST00000545026 AKAP12Q02952 1782 aa-0.52□□□□□ -2.49
LEMD3-206ENST00000545026 RGPD5Q99666 1765 aa-0.52□□□□□ -2.49
LEMD3-206ENST00000545026 CICQ96RK0 1608 aaPredicted RBP-0.53□□□□□ -2.49
LEMD3-206ENST00000545026 PDE4DIPQ5VU43 2346 aa-0.53□□□□□ -2.49
LEMD3-206ENST00000545026 LRRC9Q6ZRR7 1453 aa-0.53□□□□□ -2.49
LEMD3-206ENST00000545026 CEP162Q5TB80 1403 aa-0.53□□□□□ -2.49
LEMD3-206ENST00000545026 CDKN2A-AS1Q9UH64 79 aa-0.53□□□□□ -2.49
LEMD3-206ENST00000545026 PKHD1L1Q86WI1 4243 aa-0.53□□□□□ -2.49
LEMD3-206ENST00000545026 LYSTQ99698 3801 aa-0.54□□□□□ -2.5
LEMD3-206ENST00000545026 D6R8Y8 96 aa-0.54□□□□□ -2.5
LEMD3-206ENST00000545026 ATP6V1G2-DDX39BF2Z307 99 aa-0.54□□□□□ -2.5
LEMD3-206ENST00000545026 F8WEM9 126 aa-0.54□□□□□ -2.5
LEMD3-206ENST00000545026 COL5A1-AS1Q5SY13 56 aa-0.54□□□□□ -2.5
LEMD3-206ENST00000545026 MUSTN1Q8IVN3 82 aa-0.54□□□□□ -2.5
LEMD3-206ENST00000545026 PSENENQ9NZ42 101 aa-0.54□□□□□ -2.5
LEMD3-206ENST00000545026 HIGD1BQ9P298 99 aa-0.54□□□□□ -2.5
LEMD3-206ENST00000545026 LRRC7Q96NW7 1537 aa-0.54□□□□□ -2.5
LEMD3-206ENST00000545026 TNRC18O15417 2968 aaPredicted RBP-0.54□□□□□ -2.5
LEMD3-206ENST00000545026 ATP7BP35670 1465 aa-0.54□□□□□ -2.5
LEMD3-206ENST00000545026 TRANK1O15050 2925 aa-0.54□□□□□ -2.5
LEMD3-206ENST00000545026 AKAP9Q99996 3911 aa-0.55□□□□□ -2.5
LEMD3-206ENST00000545026 HTTP42858 3142 aa-0.55□□□□□ -2.5
LEMD3-206ENST00000545026 SUPT6HQ7KZ85 1726 aaKnown RBP-0.55□□□□□ -2.5
LEMD3-206ENST00000545026 UBR1Q8IWV7 1749 aa-0.55□□□□□ -2.5
LEMD3-206ENST00000545026 ACACAQ13085 2346 aa-0.55□□□□□ -2.5
LEMD3-206ENST00000545026 LEPROTL1O95214 131 aa-0.55□□□□□ -2.5
LEMD3-206ENST00000545026 IGLC2P0DOY2 106 aa-0.55□□□□□ -2.5
LEMD3-206ENST00000545026 IGLC3P0DOY3 106 aa-0.55□□□□□ -2.5
LEMD3-206ENST00000545026 REV3LO60673 3130 aa-0.55□□□□□ -2.5
LEMD3-206ENST00000545026 DNAH9Q9NYC9 4486 aa-0.55□□□□□ -2.5
LEMD3-206ENST00000545026 ZZEF1O43149 2961 aa-0.55□□□□□ -2.5
LEMD3-206ENST00000545026 ABCC10Q5T3U5 1492 aa-0.55□□□□□ -2.5
LEMD3-206ENST00000545026 DNAH3Q8TD57 4116 aa-0.55□□□□□ -2.5
LEMD3-206ENST00000545026 MUC17Q685J3 4493 aa-0.56□□□□□ -2.5
LEMD3-206ENST00000545026 HEPN1Q6WQI6 88 aa-0.56□□□□□ -2.5
LEMD3-206ENST00000545026 COX6B2Q6YFQ2 88 aa-0.56□□□□□ -2.5
LEMD3-206ENST00000545026 SPRR2FQ96RM1 72 aa-0.56□□□□□ -2.5
LEMD3-206ENST00000545026 CUBNO60494 3623 aa-0.56□□□□□ -2.5
LEMD3-206ENST00000545026 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.56□□□□□ -2.5
LEMD3-206ENST00000545026 ANKRD11Q6UB99 2663 aaPredicted RBP-0.57□□□□□ -2.5
LEMD3-206ENST00000545026 C4AP0C0L4 1744 aa-0.57□□□□□ -2.5
LEMD3-206ENST00000545026 C4BP0C0L5 1744 aa-0.57□□□□□ -2.5
LEMD3-206ENST00000545026 H0YGG7 62 aa-0.57□□□□□ -2.5
LEMD3-206ENST00000545026 M0R143 59 aa-0.57□□□□□ -2.5
LEMD3-206ENST00000545026 FAUP35544 74 aaKnown RBP-0.57□□□□□ -2.5
LEMD3-206ENST00000545026 NMSQ5H8A3 153 aa-0.57□□□□□ -2.5
LEMD3-206ENST00000545026 LELP1Q5T871 98 aa-0.57□□□□□ -2.5
LEMD3-206ENST00000545026 WFDC13Q8IUB5 93 aa-0.57□□□□□ -2.5
LEMD3-206ENST00000545026 LRRK2Q5S007 2527 aa-0.57□□□□□ -2.5
LEMD3-206ENST00000545026 VPS13DQ5THJ4 4388 aa-0.57□□□□□ -2.5
LEMD3-206ENST00000545026 PKD1L2Q7Z442 2459 aa-0.57□□□□□ -2.5
LEMD3-206ENST00000545026 EPPK1P58107 5090 aaKnown RBP-0.57□□□□□ -2.5
LEMD3-206ENST00000545026 MYH4Q9Y623 1939 aa-0.58□□□□□ -2.5
LEMD3-206ENST00000545026 POLR1AO95602 1720 aaPredicted RBP-0.58□□□□□ -2.5
LEMD3-206ENST00000545026 RGPD1P0DJD0 1748 aa-0.58□□□□□ -2.5
LEMD3-206ENST00000545026 VPS13BQ7Z7G8 4022 aa-0.58□□□□□ -2.5
LEMD3-206ENST00000545026 GYPAP02724 150 aa-0.58□□□□□ -2.5
LEMD3-206ENST00000545026 HMGN2P05204 90 aaKnown RBP-0.58□□□□□ -2.5
LEMD3-206ENST00000545026 COX7BP24311 80 aa-0.58□□□□□ -2.5
LEMD3-206ENST00000545026 RPL38P63173 70 aaKnown RBP-0.58□□□□□ -2.5
LEMD3-206ENST00000545026 NCMAPQ5T1S8 102 aa-0.58□□□□□ -2.5
LEMD3-206ENST00000545026 GCN1Q92616 2671 aaKnown RBP-0.58□□□□□ -2.5
LEMD3-206ENST00000545026 DMXL1Q9Y485 3027 aa-0.58□□□□□ -2.5
LEMD3-206ENST00000545026 SMIM11AP58511 58 aa-0.59□□□□□ -2.5
LEMD3-206ENST00000545026 HYDINQ4G0P3 5121 aa-0.59□□□□□ -2.5
LEMD3-206ENST00000545026 CCDC168Q8NDH2 2452 aa-0.59□□□□□ -2.5
LEMD3-206ENST00000545026 ABCC3O15438 1527 aa-0.59□□□□□ -2.5
LEMD3-206ENST00000545026 MTORP42345 2549 aa-0.6□□□□□ -2.5
LEMD3-206ENST00000545026 FAM186AA6NE01 2351 aa-0.6□□□□□ -2.5
LEMD3-206ENST00000545026 NESP48681 1621 aa-0.6□□□□□ -2.5
LEMD3-206ENST00000545026 RYR3Q15413 4870 aa-0.6□□□□□ -2.5
LEMD3-206ENST00000545026 UBR3Q6ZT12 1888 aa-0.6□□□□□ -2.51
LEMD3-206ENST00000545026 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.6□□□□□ -2.51
LEMD3-206ENST00000545026 A0A1B0GUT8 65 aa-0.6□□□□□ -2.51
LEMD3-206ENST00000545026 S100A8P05109 93 aa-0.6□□□□□ -2.51
LEMD3-206ENST00000545026 PLGLAQ15195 96 aa-0.6□□□□□ -2.51
LEMD3-206ENST00000545026 MGAM2Q2M2H8 2515 aa-0.6□□□□□ -2.51
LEMD3-206ENST00000545026 LAMA1P25391 3075 aa-0.6□□□□□ -2.51
LEMD3-206ENST00000545026 RGPD4Q7Z3J3 1758 aa-0.6□□□□□ -2.51
LEMD3-206ENST00000545026 TMEM131LA2VDJ0 1609 aa-0.6□□□□□ -2.51
LEMD3-206ENST00000545026 PLXNC1O60486 1568 aa-0.61□□□□□ -2.51
LEMD3-206ENST00000545026 H3BNG1 76 aa-0.61□□□□□ -2.51
LEMD3-206ENST00000545026 MT1AP04731 61 aa-0.61□□□□□ -2.51
LEMD3-206ENST00000545026 PEA15Q15121 130 aa-0.61□□□□□ -2.51
LEMD3-206ENST00000545026 TEX15Q9BXT5 2789 aa-0.61□□□□□ -2.51
LEMD3-206ENST00000545026 MAP3K4Q9Y6R4 1608 aa-0.61□□□□□ -2.51
LEMD3-206ENST00000545026 NWD1Q149M9 1564 aa-0.62□□□□□ -2.51
LEMD3-206ENST00000545026 LTN1O94822 1766 aa-0.62□□□□□ -2.51
LEMD3-206ENST00000545026 KALRNO60229 2985 aa-0.62□□□□□ -2.51
LEMD3-206ENST00000545026 NIPBLQ6KC79 2804 aaeCLIP-0.62□□□□□ -2.51
LEMD3-206ENST00000545026 TTC37Q6PGP7 1564 aa-0.62□□□□□ -2.51
LEMD3-206ENST00000545026 RGPD3A6NKT7 1758 aaPredicted RBP-0.62□□□□□ -2.51
LEMD3-206ENST00000545026 DNAH11Q96DT5 4516 aa-0.63□□□□□ -2.51
LEMD3-206ENST00000545026 MAGI3Q5TCQ9 1506 aa-0.63□□□□□ -2.51
LEMD3-206ENST00000545026 CEP290O15078 2479 aa-0.63□□□□□ -2.51
LEMD3-206ENST00000545026 RIF1Q5UIP0 2472 aaKnown RBP-0.63□□□□□ -2.51
LEMD3-206ENST00000545026 CYB5AP00167 134 aa-0.63□□□□□ -2.51
LEMD3-206ENST00000545026 SNHG12Q9BXW3 62 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms