RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 KLK9Q2XQG4 91 aa9.18□□□□□ -0.94
TRPM1-203ENST00000542188 IGLV7-43P04211 117 aa9.17□□□□□ -0.94
TRPM1-203ENST00000542188 A0A0G2JQZ4 141 aa9.17□□□□□ -0.94
TRPM1-203ENST00000542188 A0A1W2PNN7 141 aa9.17□□□□□ -0.94
TRPM1-203ENST00000542188 SPRR4Q96PI1 79 aa9.17□□□□□ -0.94
TRPM1-203ENST00000542188 A0A1W2PNM2 257 aa9.17□□□□□ -0.94
TRPM1-203ENST00000542188 NOTCH2Q04721 2471 aa9.16□□□□□ -0.94
TRPM1-203ENST00000542188 IGLV7-46A0A075B6I9 117 aa9.16□□□□□ -0.94
TRPM1-203ENST00000542188 EIF4EBP3O60516 100 aaPredicted RBP9.15□□□□□ -0.94
TRPM1-203ENST00000542188 CACNA1AO00555 2505 aa9.14□□□□□ -0.95
TRPM1-203ENST00000542188 PRR26Q8N8Z3 221 aa9.14□□□□□ -0.95
TRPM1-203ENST00000542188 OCR1Q9BZK8 76 aa9.14□□□□□ -0.95
TRPM1-203ENST00000542188 HIVEP3Q5T1R4 2406 aa9.14□□□□□ -0.95
TRPM1-203ENST00000542188 LINC01558Q9Y6Z2 57 aa9.12□□□□□ -0.95
TRPM1-203ENST00000542188 KRTAP24-1Q3LI83 254 aa9.09□□□□□ -0.95
TRPM1-203ENST00000542188 A0A087WTM6 91 aa9.09□□□□□ -0.95
TRPM1-203ENST00000542188 CENPFP49454 3210 aa9.08□□□□□ -0.96
TRPM1-203ENST00000542188 ANAPC11Q9NYG5 84 aa9.08□□□□□ -0.96
TRPM1-203ENST00000542188 GOLGB1Q14789 3259 aaKnown RBP9.07□□□□□ -0.96
TRPM1-203ENST00000542188 PSORS1C2Q9UIG4 136 aa9.06□□□□□ -0.96
TRPM1-203ENST00000542188 NAV2Q8IVL1 2488 aa9.06□□□□□ -0.96
TRPM1-203ENST00000542188 MYO9AB2RTY4 2548 aa9.05□□□□□ -0.96
TRPM1-203ENST00000542188 HRES1P13985 223 aa9.05□□□□□ -0.96
TRPM1-203ENST00000542188 PRAC1Q96KF2 57 aa9.05□□□□□ -0.96
TRPM1-203ENST00000542188 MYO18BQ8IUG5 2567 aa9.04□□□□□ -0.96
TRPM1-203ENST00000542188 Q6ZSA8 131 aa9.04□□□□□ -0.96
TRPM1-203ENST00000542188 CCDC168Q8NDH2 2452 aa9.04□□□□□ -0.96
TRPM1-203ENST00000542188 CNBPP62633 177 aaKnown RBP9.03□□□□□ -0.96
TRPM1-203ENST00000542188 CSAG1Q6PB30 78 aa9.03□□□□□ -0.96
TRPM1-203ENST00000542188 ABCA2Q9BZC7 2435 aa9.03□□□□□ -0.96
TRPM1-203ENST00000542188 SPINK7P58062 85 aa9.02□□□□□ -0.97
TRPM1-203ENST00000542188 COL27A1Q8IZC6 1860 aaPredicted RBP9.02□□□□□ -0.97
TRPM1-203ENST00000542188 Q5XG85 94 aa9.01□□□□□ -0.97
TRPM1-203ENST00000542188 Q8N9P0 234 aaPredicted RBP9.01□□□□□ -0.97
TRPM1-203ENST00000542188 LINC00612Q8N6U2 182 aa9□□□□□ -0.97
TRPM1-203ENST00000542188 IGF2RP11717 2491 aa8.99□□□□□ -0.97
TRPM1-203ENST00000542188 C19orf73Q9NVV2 129 aa8.98□□□□□ -0.97
TRPM1-203ENST00000542188 SMR3BP02814 79 aaPredicted RBP8.97□□□□□ -0.97
TRPM1-203ENST00000542188 TLN1Q9Y490 2541 aaKnown RBP8.96□□□□□ -0.97
TRPM1-203ENST00000542188 S4R3F8 94 aa8.96□□□□□ -0.98
TRPM1-203ENST00000542188 GIG44P09565 113 aaPredicted RBP8.95□□□□□ -0.98
TRPM1-203ENST00000542188 FAM229BQ4G0N7 80 aa8.95□□□□□ -0.98
TRPM1-203ENST00000542188 Q5VV11 94 aa8.94□□□□□ -0.98
TRPM1-203ENST00000542188 KRTAP10-11P60412 298 aa8.92□□□□□ -0.98
TRPM1-203ENST00000542188 ROMO1P60602 79 aa8.91□□□□□ -0.98
TRPM1-203ENST00000542188 K7EIL1 84 aa8.9□□□□□ -0.98
TRPM1-203ENST00000542188 ZCCHC13Q8WW36 166 aaKnown RBP8.9□□□□□ -0.98
TRPM1-203ENST00000542188 COL4A2P08572 1712 aa8.89□□□□□ -0.99
TRPM1-203ENST00000542188 FP248Q71RG6 208 aaPredicted RBP8.89□□□□□ -0.99
TRPM1-203ENST00000542188 NCOR2Q9Y618 2525 aa8.88□□□□□ -0.99
TRPM1-203ENST00000542188 FN1P02751 2386 aaKnown RBP8.88□□□□□ -0.99
TRPM1-203ENST00000542188 MMP24-AS1A0A0U1RRL7 71 aa8.87□□□□□ -0.99
TRPM1-203ENST00000542188 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.86□□□□□ -0.99
TRPM1-203ENST00000542188 ASB16-AS1Q495Z4 193 aa8.85□□□□□ -0.99
TRPM1-203ENST00000542188 M0R2T5 61 aa8.85□□□□□ -0.99
TRPM1-203ENST00000542188 CASC10Q5T4H9 136 aa8.85□□□□□ -0.99
TRPM1-203ENST00000542188 TNP2Q05952 138 aa8.83□□□□□ -1
TRPM1-203ENST00000542188 RPL37P61927 97 aaKnown RBP8.82□□□□□ -1
TRPM1-203ENST00000542188 TLN2Q9Y4G6 2542 aa8.82□□□□□ -1
TRPM1-203ENST00000542188 SETD2Q9BYW2 2564 aaPredicted RBP8.81□□□□□ -1
TRPM1-203ENST00000542188 R4GN34 69 aa8.81□□□□□ -1
TRPM1-203ENST00000542188 KRTAP16-1A8MUX0 517 aa8.81□□□□□ -1
TRPM1-203ENST00000542188 USP9XQ93008 2570 aaPredicted RBP8.81□□□□□ -1
TRPM1-203ENST00000542188 DOPEY1Q5JWR5 2465 aa8.79□□□□□ -1
TRPM1-203ENST00000542188 Q5W150 140 aa8.79□□□□□ -1
TRPM1-203ENST00000542188 ABCA12Q86UK0 2595 aa8.78□□□□□ -1
TRPM1-203ENST00000542188 DNAH12Q6ZR08 3092 aa8.77□□□□□ -1.01
TRPM1-203ENST00000542188 H1FX-AS1Q4G0G2 97 aa8.74□□□□□ -1.01
TRPM1-203ENST00000542188 USP9YO00507 2555 aaPredicted RBP8.71□□□□□ -1.01
TRPM1-203ENST00000542188 PCSK5Q92824 1860 aa8.71□□□□□ -1.02
TRPM1-203ENST00000542188 A0A096LNT2 108 aa8.7□□□□□ -1.02
TRPM1-203ENST00000542188 PKD1L2Q7Z442 2459 aa8.7□□□□□ -1.02
TRPM1-203ENST00000542188 JMJD1CQ15652 2540 aa8.7□□□□□ -1.02
TRPM1-203ENST00000542188 CYSTM1Q9H1C7 97 aa8.69□□□□□ -1.02
TRPM1-203ENST00000542188 KRTAP10-3P60369 221 aa8.69□□□□□ -1.02
TRPM1-203ENST00000542188 CEP295Q9C0D2 2601 aa8.68□□□□□ -1.02
TRPM1-203ENST00000542188 ANKRD11Q6UB99 2663 aaPredicted RBP8.67□□□□□ -1.02
TRPM1-203ENST00000542188 LINC00472Q9H8W2 130 aa8.65□□□□□ -1.02
TRPM1-203ENST00000542188 PIEZO1Q92508 2521 aa8.63□□□□□ -1.03
TRPM1-203ENST00000542188 M0QZ58 72 aa8.63□□□□□ -1.03
TRPM1-203ENST00000542188 LRRK2Q5S007 2527 aa8.63□□□□□ -1.03
TRPM1-203ENST00000542188 ZFYVE26Q68DK2 2539 aa8.62□□□□□ -1.03
TRPM1-203ENST00000542188 SPRR1BP22528 89 aa8.62□□□□□ -1.03
TRPM1-203ENST00000542188 SPRR1AP35321 89 aa8.62□□□□□ -1.03
TRPM1-203ENST00000542188 PLAC8Q9NZF1 115 aa8.62□□□□□ -1.03
TRPM1-203ENST00000542188 ZNF462Q96JM2 2506 aa8.6□□□□□ -1.03
TRPM1-203ENST00000542188 CEP350Q5VT06 3117 aa8.59□□□□□ -1.03
TRPM1-203ENST00000542188 SEC61BP60468 96 aaKnown RBP8.59□□□□□ -1.03
TRPM1-203ENST00000542188 PLAC4Q8WY50 150 aa8.59□□□□□ -1.03
TRPM1-203ENST00000542188 BPTFQ12830 3046 aa8.59□□□□□ -1.03
TRPM1-203ENST00000542188 PRRC2CQ9Y520 2896 aaKnown RBP8.57□□□□□ -1.04
TRPM1-203ENST00000542188 OXTP01178 125 aa8.55□□□□□ -1.04
TRPM1-203ENST00000542188 PCNTO95613 3336 aa8.54□□□□□ -1.04
TRPM1-203ENST00000542188 MTORP42345 2549 aa8.53□□□□□ -1.04
TRPM1-203ENST00000542188 KRTAP26-1Q6PEX3 210 aa8.52□□□□□ -1.04
TRPM1-203ENST00000542188 CR1P17927 2039 aa8.52□□□□□ -1.05
TRPM1-203ENST00000542188 POLQO75417 2590 aa8.52□□□□□ -1.05
TRPM1-203ENST00000542188 KRTAP25-1Q3LHN0 102 aa8.51□□□□□ -1.05
TRPM1-203ENST00000542188 UTRNP46939 3433 aa8.51□□□□□ -1.05
TRPM1-203ENST00000542188 SPATA8Q6RVD6 105 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms