RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 LY6G6CO95867 125 aa9.01□□□□□ -0.97
ACTN1-205ENST00000538545 HECTD4Q9Y4D8 3996 aa9□□□□□ -0.97
ACTN1-205ENST00000538545 CNBPP62633 177 aaKnown RBP8.99□□□□□ -0.97
ACTN1-205ENST00000538545 MRPL55Q7Z7F7 128 aaKnown RBP8.99□□□□□ -0.97
ACTN1-205ENST00000538545 LINC00528Q8N1L1 170 aa8.99□□□□□ -0.97
ACTN1-205ENST00000538545 IGLV1-50A0A075B6I6 118 aa8.98□□□□□ -0.97
ACTN1-205ENST00000538545 SMCR5Q8TEV8 140 aa8.98□□□□□ -0.97
ACTN1-205ENST00000538545 KRTAP11-1Q8IUC1 163 aa8.97□□□□□ -0.97
ACTN1-205ENST00000538545 DEFB105AQ8NG35 78 aa8.97□□□□□ -0.97
ACTN1-205ENST00000538545 KCNQ1DNQ9H478 68 aa8.97□□□□□ -0.97
ACTN1-205ENST00000538545 LAMTOR3Q9UHA4 124 aa8.97□□□□□ -0.97
ACTN1-205ENST00000538545 A0A1B0GX51 115 aa8.96□□□□□ -0.97
ACTN1-205ENST00000538545 C16orf90A8MZG2 172 aa8.96□□□□□ -0.97
ACTN1-205ENST00000538545 TMEM256-PLSCR3K7ERE1 68 aa8.96□□□□□ -0.97
ACTN1-205ENST00000538545 PHF5AQ7RTV0 110 aaKnown RBP8.95□□□□□ -0.98
ACTN1-205ENST00000538545 OBSCN-AS1Q96MR7 158 aa8.95□□□□□ -0.98
ACTN1-205ENST00000538545 Q9BRP9 147 aa8.95□□□□□ -0.98
ACTN1-205ENST00000538545 DNAH6Q9C0G6 4158 aa8.95□□□□□ -0.98
ACTN1-205ENST00000538545 C3orf22Q8N5N4 141 aa8.95□□□□□ -0.98
ACTN1-205ENST00000538545 PLA2G2DQ9UNK4 145 aa8.95□□□□□ -0.98
ACTN1-205ENST00000538545 SNCGO76070 127 aa8.94□□□□□ -0.98
ACTN1-205ENST00000538545 C9orf163Q8N9P6 203 aa8.94□□□□□ -0.98
ACTN1-205ENST00000538545 ERC2-IT1O76042 136 aa8.93□□□□□ -0.98
ACTN1-205ENST00000538545 INAFM2P0DMQ5 153 aa8.93□□□□□ -0.98
ACTN1-205ENST00000538545 KRTAP21-3Q3LHN1 58 aa8.93□□□□□ -0.98
ACTN1-205ENST00000538545 ST20-AS1Q8NBB2 130 aa8.93□□□□□ -0.98
ACTN1-205ENST00000538545 A0A087WTM6 91 aa8.93□□□□□ -0.98
ACTN1-205ENST00000538545 Q6ZR54 194 aa8.93□□□□□ -0.98
ACTN1-205ENST00000538545 DPH3Q96FX2 82 aa8.93□□□□□ -0.98
ACTN1-205ENST00000538545 DNAH17Q9UFH2 4485 aa8.93□□□□□ -0.98
ACTN1-205ENST00000538545 IGLV5-37A0A075B6J1 123 aa8.92□□□□□ -0.98
ACTN1-205ENST00000538545 KRTAP4-16G5E9R7 235 aaPredicted RBP8.92□□□□□ -0.98
ACTN1-205ENST00000538545 SDIM1Q6ZPB5 146 aa8.92□□□□□ -0.98
ACTN1-205ENST00000538545 PRLHP81277 87 aa8.92□□□□□ -0.98
ACTN1-205ENST00000538545 C14orf177Q52M58 125 aa8.92□□□□□ -0.98
ACTN1-205ENST00000538545 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.91□□□□□ -0.98
ACTN1-205ENST00000538545 ETDCA0A1B0GVM5 59 aa8.91□□□□□ -0.98
ACTN1-205ENST00000538545 B5MCH6 92 aa8.91□□□□□ -0.98
ACTN1-205ENST00000538545 LINC00846Q9NV44 126 aa8.91□□□□□ -0.98
ACTN1-205ENST00000538545 FRAS1Q86XX4 4008 aa8.91□□□□□ -0.98
ACTN1-205ENST00000538545 Q6ZRX8 168 aa8.9□□□□□ -0.98
ACTN1-205ENST00000538545 TRBV7-6A0A0J9YX20 115 aa8.89□□□□□ -0.99
ACTN1-205ENST00000538545 FAM240AA0A1B0GVK7 77 aa8.89□□□□□ -0.99
ACTN1-205ENST00000538545 SPRR1AP35321 89 aa8.89□□□□□ -0.99
ACTN1-205ENST00000538545 UBE2BP63146 152 aa8.89□□□□□ -0.99
ACTN1-205ENST00000538545 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-205ENST00000538545 RBM3P98179 157 aaKnown RBP8.88□□□□□ -0.99
ACTN1-205ENST00000538545 REG3GQ6UW15 175 aa8.88□□□□□ -0.99
ACTN1-205ENST00000538545 WWC2-AS2Q96NR7 200 aa8.88□□□□□ -0.99
ACTN1-205ENST00000538545 DNAH8Q96JB1 4490 aa8.88□□□□□ -0.99
ACTN1-205ENST00000538545 PRYO14603 147 aa8.88□□□□□ -0.99
ACTN1-205ENST00000538545 DNAH11Q96DT5 4516 aa8.87□□□□□ -0.99
ACTN1-205ENST00000538545 LINC00476Q8WZB0 136 aa8.87□□□□□ -0.99
ACTN1-205ENST00000538545 TNP2Q05952 138 aa8.87□□□□□ -0.99
ACTN1-205ENST00000538545 JMJD7-PLA2G4BH0Y9G9 81 aa8.86□□□□□ -0.99
ACTN1-205ENST00000538545 FAM19A1Q7Z5A9 133 aa8.86□□□□□ -0.99
ACTN1-205ENST00000538545 Q8N377 158 aa8.86□□□□□ -0.99
ACTN1-205ENST00000538545 SCGB1A1P11684 91 aa8.86□□□□□ -0.99
ACTN1-205ENST00000538545 C1orf134Q5TEV5 83 aa8.86□□□□□ -0.99
ACTN1-205ENST00000538545 DNAH5Q8TE73 4624 aa8.86□□□□□ -0.99
ACTN1-205ENST00000538545 RTL8CO15255 209 aa8.86□□□□□ -0.99
ACTN1-205ENST00000538545 CCKP06307 115 aa8.86□□□□□ -0.99
ACTN1-205ENST00000538545 NDUFV3P56181 108 aaKnown RBP8.86□□□□□ -0.99
ACTN1-205ENST00000538545 HIGD2AQ9BW72 106 aa8.85□□□□□ -0.99
ACTN1-205ENST00000538545 LINC01547P58512 204 aaPredicted RBP8.85□□□□□ -0.99
ACTN1-205ENST00000538545 Q6ZQT0 140 aa8.84□□□□□ -0.99
ACTN1-205ENST00000538545 IGKV3D-7A0A0C4DH55 119 aa8.83□□□□□ -1
ACTN1-205ENST00000538545 A0A0G2JQZ4 141 aa8.83□□□□□ -1
ACTN1-205ENST00000538545 ACYP1P07311 99 aa8.82□□□□□ -1
ACTN1-205ENST00000538545 DSCR8Q96T75 97 aa8.82□□□□□ -1
ACTN1-205ENST00000538545 HAMPP81172 84 aa8.81□□□□□ -1
ACTN1-205ENST00000538545 SACSQ9NZJ4 4579 aa8.81□□□□□ -1
ACTN1-205ENST00000538545 FAT2Q9NYQ8 4349 aa8.8□□□□□ -1
ACTN1-205ENST00000538545 KRTAP10-2P60368 255 aa8.8□□□□□ -1
ACTN1-205ENST00000538545 SPACA4Q8TDM5 124 aa8.8□□□□□ -1
ACTN1-205ENST00000538545 DHRS4-AS1Q9P1J3 65 aa8.8□□□□□ -1
ACTN1-205ENST00000538545 IGLV5-52A0A0A0MRZ9 124 aa8.79□□□□□ -1
ACTN1-205ENST00000538545 TRBV7-4A0A0J9YYF1 115 aa8.77□□□□□ -1
ACTN1-205ENST00000538545 EPM2AB3EWF7 344 aa8.77□□□□□ -1
ACTN1-205ENST00000538545 LINC00643Q86TS7 51 aa8.77□□□□□ -1
ACTN1-205ENST00000538545 PKD1P98161 4303 aa8.76□□□□□ -1.01
ACTN1-205ENST00000538545 SS18L2Q9UHA2 77 aa8.76□□□□□ -1.01
ACTN1-205ENST00000538545 ALMS1Q8TCU4 4167 aa8.76□□□□□ -1.01
ACTN1-205ENST00000538545 A0A087WVE0 104 aa8.76□□□□□ -1.01
ACTN1-205ENST00000538545 LOC110117498A0A087WWA1 95 aa8.76□□□□□ -1.01
ACTN1-205ENST00000538545 C3orf84H3BNL1 204 aa8.75□□□□□ -1.01
ACTN1-205ENST00000538545 FAM30AQ9NZY2 134 aa8.74□□□□□ -1.01
ACTN1-205ENST00000538545 PKHD1P08F94 4074 aa8.74□□□□□ -1.01
ACTN1-205ENST00000538545 LINC00474Q9P2X8 69 aa8.73□□□□□ -1.01
ACTN1-205ENST00000538545 UBE2AP49459 152 aa8.73□□□□□ -1.01
ACTN1-205ENST00000538545 SCXQ7RTU7 201 aa8.73□□□□□ -1.01
ACTN1-205ENST00000538545 IGLV5-48A0A075B6I7 105 aa8.72□□□□□ -1.01
ACTN1-205ENST00000538545 SMIM29Q86T20 159 aa8.72□□□□□ -1.01
ACTN1-205ENST00000538545 TRBV7-7A0A0K0K1E9 115 aa8.72□□□□□ -1.01
ACTN1-205ENST00000538545 LRP1BQ9NZR2 4599 aa8.71□□□□□ -1.02
ACTN1-205ENST00000538545 KMT2CQ8NEZ4 4911 aaKnown RBP8.71□□□□□ -1.02
ACTN1-205ENST00000538545 FAM236AA0A1B0GUQ0 79 aa8.7□□□□□ -1.02
ACTN1-205ENST00000538545 FAM236BA0A1B0GV22 79 aa8.7□□□□□ -1.02
ACTN1-205ENST00000538545 GHRHP01286 108 aa8.7□□□□□ -1.02
ACTN1-205ENST00000538545 Q6ZVQ6 151 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms