RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 MAP1LC3BQ9GZQ8 125 aa0.53□□□□□ -2.32
PCM1-220ENST00000523896 SS18L2Q9UHA2 77 aa0.53□□□□□ -2.32
PCM1-220ENST00000523896 SNRPGP15A8MWD9 76 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 ZNF670-ZNF695F2Z2N8 137 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 JMJD7-PLA2G4BH0Y9G9 81 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 K7ERJ3 54 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 HIST1H2BKO60814 126 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 PPYP01298 95 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 HIST1H2BJP06899 126 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 FABP1P07148 127 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 PRLHP81277 87 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 CCDC153Q494R4 210 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 SPATA45Q537H7 98 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 SPATA8Q6RVD6 105 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 OR51A4Q8NGJ6 313 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 PLEKHB2Q96CS7 222 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 SPRR2GQ9BYE4 73 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 C10orf95Q9H7T3 257 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 HSPB8Q9UJY1 196 aa0.52□□□□□ -2.33
PCM1-220ENST00000523896 TRBV25-1A0A075B6N4 114 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 LYRM1O43325 122 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 TCRAP04437 139 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 SLC25A4P12235 298 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 MT1GP13640 62 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 S100A10P60903 97 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 PPP3R1P63098 170 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 SELENOWP63302 87 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 MT1XP80297 61 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 DR1Q01658 176 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 CATR1Q13166 79 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 MSMO1Q15800 293 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 HRCT1Q6UXD1 115 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 AP3S1Q92572 193 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 AQP10Q96PS8 301 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 CCDC32Q9BV29 185 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 CMC2Q9NRP2 79 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 COMMD3Q9UBI1 195 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 GNG8Q9UK08 70 aa0.51□□□□□ -2.33
PCM1-220ENST00000523896 TRBV7-3A0A075B6L6 115 aa0.5□□□□□ -2.33
PCM1-220ENST00000523896 RPL7P18124 248 aaKnown RBP0.5□□□□□ -2.33
PCM1-220ENST00000523896 SMIM11AP58511 58 aa0.5□□□□□ -2.33
PCM1-220ENST00000523896 C9orf153Q5TBE3 101 aa0.5□□□□□ -2.33
PCM1-220ENST00000523896 FAM74A4Q5TZK3 123 aa0.5□□□□□ -2.33
PCM1-220ENST00000523896 SSBP3-AS1Q7Z2R9 100 aa0.5□□□□□ -2.33
PCM1-220ENST00000523896 PLAC4Q8WY50 150 aa0.5□□□□□ -2.33
PCM1-220ENST00000523896 SPRR4Q96PI1 79 aa0.5□□□□□ -2.33
PCM1-220ENST00000523896 TSC22D3Q99576 134 aa0.5□□□□□ -2.33
PCM1-220ENST00000523896 PDCD10Q9BUL8 212 aa0.5□□□□□ -2.33
PCM1-220ENST00000523896 SCN3BQ9NY72 215 aa0.5□□□□□ -2.33
PCM1-220ENST00000523896 IL20Q9NYY1 176 aa0.5□□□□□ -2.33
PCM1-220ENST00000523896 IGHV1-24A0A0C4DH33 117 aa0.49□□□□□ -2.33
PCM1-220ENST00000523896 TRBV10-1A0A0K0K1A3 114 aa0.49□□□□□ -2.33
PCM1-220ENST00000523896 PNMA8CA0A1B0GUJ8 204 aa0.49□□□□□ -2.33
PCM1-220ENST00000523896 C9orf170A2RU37 121 aa0.49□□□□□ -2.33
PCM1-220ENST00000523896 GABARAPH6UMI1 98 aa0.49□□□□□ -2.33
PCM1-220ENST00000523896 HBBP68871 147 aa0.49□□□□□ -2.33
PCM1-220ENST00000523896 TMEM78Q5T7P6 136 aa0.49□□□□□ -2.33
PCM1-220ENST00000523896 Q5XG85 94 aa0.49□□□□□ -2.33
PCM1-220ENST00000523896 MT1MQ8N339 61 aa0.49□□□□□ -2.33
PCM1-220ENST00000523896 SMIM20Q8N5G0 67 aa0.49□□□□□ -2.33
PCM1-220ENST00000523896 MAFIPQ8WZ33 124 aa0.49□□□□□ -2.33
PCM1-220ENST00000523896 TMEM242Q9NWH2 141 aa0.49□□□□□ -2.33
PCM1-220ENST00000523896 TRAV23DV6A0A075B6W5 121 aa0.48□□□□□ -2.33
PCM1-220ENST00000523896 MT1EP04732 61 aa0.48□□□□□ -2.33
PCM1-220ENST00000523896 NMBP08949 121 aa0.48□□□□□ -2.33
PCM1-220ENST00000523896 RPL35P42766 123 aaKnown RBP0.48□□□□□ -2.33
PCM1-220ENST00000523896 FOXA3P55318 350 aaPredicted RBP0.48□□□□□ -2.33
PCM1-220ENST00000523896 ARPC4P59998 168 aa0.48□□□□□ -2.33
PCM1-220ENST00000523896 SPAG11BQ08648 103 aa0.48□□□□□ -2.33
PCM1-220ENST00000523896 OR8J3Q8NGG0 315 aa0.48□□□□□ -2.33
PCM1-220ENST00000523896 AGPAT4-IT1Q9H0P7 198 aa0.48□□□□□ -2.33
PCM1-220ENST00000523896 NAA60Q9H7X0 242 aa0.48□□□□□ -2.33
PCM1-220ENST00000523896 CCDC167Q9P0B6 97 aa0.48□□□□□ -2.33
PCM1-220ENST00000523896 A0A0D9SG42 100 aa0.47□□□□□ -2.33
PCM1-220ENST00000523896 TRBV6-1A0A0K0K1D8 114 aa0.47□□□□□ -2.33
PCM1-220ENST00000523896 NDUFA1O15239 70 aa0.47□□□□□ -2.33
PCM1-220ENST00000523896 CFDP00746 253 aaPredicted RBP0.47□□□□□ -2.33
PCM1-220ENST00000523896 HMGN1P05114 100 aa0.47□□□□□ -2.33
PCM1-220ENST00000523896 MIR22HGQ0VDD5 57 aa0.47□□□□□ -2.33
PCM1-220ENST00000523896 IQCJQ1A5X6 159 aa0.47□□□□□ -2.33
PCM1-220ENST00000523896 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
PCM1-220ENST00000523896 HSD17B12Q53GQ0 312 aa0.47□□□□□ -2.33
PCM1-220ENST00000523896 ATOH7Q8N100 152 aa0.47□□□□□ -2.33
PCM1-220ENST00000523896 OR5AK2Q8NH90 309 aa0.47□□□□□ -2.33
PCM1-220ENST00000523896 Q96NJ1 140 aa0.47□□□□□ -2.33
PCM1-220ENST00000523896 MRPL35Q9NZE8 188 aaKnown RBP0.47□□□□□ -2.33
PCM1-220ENST00000523896 LAMTOR3Q9UHA4 124 aa0.47□□□□□ -2.33
PCM1-220ENST00000523896 HIGD1AQ9Y241 93 aa0.47□□□□□ -2.33
PCM1-220ENST00000523896 J3QLW9 94 aa0.46□□□□□ -2.34
PCM1-220ENST00000523896 M0R3E3 92 aa0.46□□□□□ -2.34
PCM1-220ENST00000523896 PDE6GP18545 87 aa0.46□□□□□ -2.34
PCM1-220ENST00000523896 FXYD4P59646 89 aa0.46□□□□□ -2.34
PCM1-220ENST00000523896 ZNF56Q15929 161 aa0.46□□□□□ -2.34
PCM1-220ENST00000523896 AKAP14Q86UN6 197 aa0.46□□□□□ -2.34
PCM1-220ENST00000523896 TRAV21A0A0B4J279 112 aa0.45□□□□□ -2.34
PCM1-220ENST00000523896 LINC00959A0A1B0GUT2 108 aa0.45□□□□□ -2.34
PCM1-220ENST00000523896 TMEM238C9JI98 176 aa0.45□□□□□ -2.34
PCM1-220ENST00000523896 GTF2A1P52655 376 aaPredicted RBP0.45□□□□□ -2.34
PCM1-220ENST00000523896 Q6AWC8 147 aa0.45□□□□□ -2.34
PCM1-220ENST00000523896 LINC00299Q6ZSB3 139 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms