RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 BAHCC1Q9P281 2608 aa2.2□□□□□ -2.06
CTNNA1-238ENST00000523298 IGKV3D-7A0A0C4DH55 119 aa2.19□□□□□ -2.06
CTNNA1-238ENST00000523298 J3QKU1 62 aa2.19□□□□□ -2.06
CTNNA1-238ENST00000523298 IFI6P09912 130 aa2.19□□□□□ -2.06
CTNNA1-238ENST00000523298 AMELXQ99217 191 aa2.19□□□□□ -2.06
CTNNA1-238ENST00000523298 ABRACLQ9P1F3 81 aa2.19□□□□□ -2.06
CTNNA1-238ENST00000523298 PTPN13Q12923 2485 aa2.19□□□□□ -2.06
CTNNA1-238ENST00000523298 USP9XQ93008 2570 aaPredicted RBP2.19□□□□□ -2.06
CTNNA1-238ENST00000523298 ZFHX3Q15911 3703 aa2.19□□□□□ -2.06
CTNNA1-238ENST00000523298 NBPF19A0A087WUL8 3843 aa2.19□□□□□ -2.06
CTNNA1-238ENST00000523298 HELZ2Q9BYK8 2649 aaKnown RBP2.19□□□□□ -2.06
CTNNA1-238ENST00000523298 WNK2Q9Y3S1 2297 aa2.19□□□□□ -2.06
CTNNA1-238ENST00000523298 CFAP46Q8IYW2 2715 aa2.19□□□□□ -2.06
CTNNA1-238ENST00000523298 USF3Q68DE3 2245 aa2.18□□□□□ -2.06
CTNNA1-238ENST00000523298 GCN1Q92616 2671 aaKnown RBP2.18□□□□□ -2.06
CTNNA1-238ENST00000523298 ANKRD17O75179 2603 aaKnown RBP2.18□□□□□ -2.06
CTNNA1-238ENST00000523298 A0A1W2PNN7 141 aa2.18□□□□□ -2.06
CTNNA1-238ENST00000523298 CCL3L1P16619 93 aa2.18□□□□□ -2.06
CTNNA1-238ENST00000523298 CCL18P55774 89 aa2.18□□□□□ -2.06
CTNNA1-238ENST00000523298 LINC01558Q9Y6Z2 57 aa2.18□□□□□ -2.06
CTNNA1-238ENST00000523298 UTP20O75691 2785 aaKnown RBP2.18□□□□□ -2.06
CTNNA1-238ENST00000523298 MED13LQ71F56 2210 aa2.18□□□□□ -2.06
CTNNA1-238ENST00000523298 FLNCQ14315 2725 aa2.18□□□□□ -2.06
CTNNA1-238ENST00000523298 RELNP78509 3460 aa2.17□□□□□ -2.06
CTNNA1-238ENST00000523298 SPG11Q96JI7 2443 aa2.17□□□□□ -2.06
CTNNA1-238ENST00000523298 LRRK2Q5S007 2527 aa2.17□□□□□ -2.06
CTNNA1-238ENST00000523298 M0R3E3 92 aa2.17□□□□□ -2.06
CTNNA1-238ENST00000523298 R4GN34 69 aa2.17□□□□□ -2.06
CTNNA1-238ENST00000523298 KALRNO60229 2985 aa2.17□□□□□ -2.06
CTNNA1-238ENST00000523298 ANKHD1Q8IWZ3 2542 aaKnown RBP2.17□□□□□ -2.06
CTNNA1-238ENST00000523298 IGKV3OR2-268A0A0C4DH90 116 aa2.16□□□□□ -2.06
CTNNA1-238ENST00000523298 A0A1B0GUT8 65 aa2.16□□□□□ -2.06
CTNNA1-238ENST00000523298 F8VRH5 84 aa2.16□□□□□ -2.06
CTNNA1-238ENST00000523298 K7EMI3 77 aa2.16□□□□□ -2.06
CTNNA1-238ENST00000523298 M0R135 149 aa2.16□□□□□ -2.06
CTNNA1-238ENST00000523298 CTSGP08311 255 aa2.16□□□□□ -2.06
CTNNA1-238ENST00000523298 CAV3P56539 151 aa2.16□□□□□ -2.06
CTNNA1-238ENST00000523298 PSORS1C2Q9UIG4 136 aa2.16□□□□□ -2.06
CTNNA1-238ENST00000523298 TENM4Q6N022 2769 aa2.16□□□□□ -2.06
CTNNA1-238ENST00000523298 USP9YO00507 2555 aaPredicted RBP2.16□□□□□ -2.06
CTNNA1-238ENST00000523298 DOPEY1Q5JWR5 2465 aa2.16□□□□□ -2.06
CTNNA1-238ENST00000523298 HECTD1Q9ULT8 2610 aa2.16□□□□□ -2.06
CTNNA1-238ENST00000523298 MRPL33O75394 65 aaKnown RBP2.15□□□□□ -2.07
CTNNA1-238ENST00000523298 DNAL4O96015 105 aa2.15□□□□□ -2.07
CTNNA1-238ENST00000523298 IGLV3-1P01715 115 aa2.15□□□□□ -2.07
CTNNA1-238ENST00000523298 FCER1GP30273 86 aa2.15□□□□□ -2.07
CTNNA1-238ENST00000523298 NREPQ16612 68 aa2.15□□□□□ -2.07
CTNNA1-238ENST00000523298 COX7B2Q8TF08 81 aa2.15□□□□□ -2.07
CTNNA1-238ENST00000523298 HIGD2AQ9BW72 106 aa2.15□□□□□ -2.07
CTNNA1-238ENST00000523298 ABCA12Q86UK0 2595 aa2.15□□□□□ -2.07
CTNNA1-238ENST00000523298 CENPEQ02224 2701 aa2.15□□□□□ -2.07
CTNNA1-238ENST00000523298 POLQO75417 2590 aa2.14□□□□□ -2.07
CTNNA1-238ENST00000523298 UBR5O95071 2799 aaPredicted RBP2.14□□□□□ -2.07
CTNNA1-238ENST00000523298 LCE6AA0A183 80 aa2.14□□□□□ -2.07
CTNNA1-238ENST00000523298 J3QRE1 110 aa2.14□□□□□ -2.07
CTNNA1-238ENST00000523298 COX6B1P14854 86 aa2.14□□□□□ -2.07
CTNNA1-238ENST00000523298 PDE6GP18545 87 aa2.14□□□□□ -2.07
CTNNA1-238ENST00000523298 HCP5Q6MZN7 132 aa2.14□□□□□ -2.07
CTNNA1-238ENST00000523298 BRD3OSQ6XYD6 125 aa2.14□□□□□ -2.07
CTNNA1-238ENST00000523298 Q6ZTI0 123 aa2.14□□□□□ -2.07
CTNNA1-238ENST00000523298 TXNDC17Q9BRA2 123 aa2.14□□□□□ -2.07
CTNNA1-238ENST00000523298 TTTY10Q9BZA0 68 aa2.14□□□□□ -2.07
CTNNA1-238ENST00000523298 R4GMQ9 66 aa2.14□□□□□ -2.07
CTNNA1-238ENST00000523298 CREBBPQ92793 2442 aa2.14□□□□□ -2.07
CTNNA1-238ENST00000523298 HRNRQ86YZ3 2850 aaPredicted RBP2.14□□□□□ -2.07
CTNNA1-238ENST00000523298 MYO9AB2RTY4 2548 aa2.14□□□□□ -2.07
CTNNA1-238ENST00000523298 ABCA2Q9BZC7 2435 aa2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 NAV2Q8IVL1 2488 aa2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 A0A087WTM6 91 aa2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 HRES1P13985 223 aa2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 RPS27P42677 84 aaKnown RBP2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 SPINK7P58062 85 aa2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 FXYD6P3P58550 94 aa2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 TFF3Q07654 80 aa2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 KRTAP6-3Q3LI67 103 aa2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 TMEM263Q8WUH6 116 aaKnown RBP2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 C4orf3Q8WVX3 66 aa2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 LINC00846Q9NV44 126 aa2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 V9GYV3 84 aa2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 ABCA1O95477 2261 aa2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 CCDC168Q8NDH2 2452 aa2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 COL12A1Q99715 3063 aa2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 CRYBG3Q68DQ2 2970 aa2.13□□□□□ -2.07
CTNNA1-238ENST00000523298 LRBAP50851 2863 aa2.12□□□□□ -2.07
CTNNA1-238ENST00000523298 FLNBO75369 2602 aaKnown RBP2.12□□□□□ -2.07
CTNNA1-238ENST00000523298 NAV3Q8IVL0 2385 aa2.12□□□□□ -2.07
CTNNA1-238ENST00000523298 TRBV6-4A0A1B0GX49 114 aa2.12□□□□□ -2.07
CTNNA1-238ENST00000523298 SMIM27A0A1W2PRY6 76 aa2.12□□□□□ -2.07
CTNNA1-238ENST00000523298 H3BSH0 61 aa2.12□□□□□ -2.07
CTNNA1-238ENST00000523298 ZNF137PP52743 207 aa2.12□□□□□ -2.07
CTNNA1-238ENST00000523298 SNRPGP62308 76 aaKnown RBP2.12□□□□□ -2.07
CTNNA1-238ENST00000523298 TPRXLQ17RH7 258 aa2.12□□□□□ -2.07
CTNNA1-238ENST00000523298 ZCCHC13Q8WW36 166 aaKnown RBP2.12□□□□□ -2.07
CTNNA1-238ENST00000523298 OBSCN-AS1Q96MR7 158 aa2.12□□□□□ -2.07
CTNNA1-238ENST00000523298 SPRR4Q96PI1 79 aa2.12□□□□□ -2.07
CTNNA1-238ENST00000523298 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.12□□□□□ -2.072e-6■■■□□ 15.3
CTNNA1-238ENST00000523298 ITPR2Q14571 2701 aa2.11□□□□□ -2.07
CTNNA1-238ENST00000523298 ACANP16112 2415 aa2.11□□□□□ -2.07
CTNNA1-238ENST00000523298 CSPG4Q6UVK1 2322 aa2.11□□□□□ -2.07
CTNNA1-238ENST00000523298 TRAV1-2A0A0B4J238 106 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 346.2 ms