RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 OXTP01178 125 aa3.39□□□□□ -1.87
SDC2-204ENST00000519914 ANGP03950 147 aaKnown RBP3.39□□□□□ -1.87
SDC2-204ENST00000519914 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
SDC2-204ENST00000519914 RBM3P98179 157 aaKnown RBP3.39□□□□□ -1.87
SDC2-204ENST00000519914 EGFEM1PQ0D2K5 195 aa3.39□□□□□ -1.87
SDC2-204ENST00000519914 SMCR5Q8TEV8 140 aa3.39□□□□□ -1.87
SDC2-204ENST00000519914 C11orf68Q9H3H3 251 aaKnown RBP3.39□□□□□ -1.87
SDC2-204ENST00000519914 HUWE1Q7Z6Z7 4374 aaKnown RBP3.38□□□□□ -1.87
SDC2-204ENST00000519914 SETD2Q9BYW2 2564 aaPredicted RBP3.38□□□□□ -1.87
SDC2-204ENST00000519914 LECT2O14960 151 aa3.38□□□□□ -1.87
SDC2-204ENST00000519914 IGLV6-57P01721 117 aa3.38□□□□□ -1.87
SDC2-204ENST00000519914 CCKP06307 115 aa3.38□□□□□ -1.87
SDC2-204ENST00000519914 SPAG11BQ08648 103 aa3.38□□□□□ -1.87
SDC2-204ENST00000519914 KRTAP26-1Q6PEX3 210 aa3.38□□□□□ -1.87
SDC2-204ENST00000519914 LYPD5Q6UWN5 251 aa3.38□□□□□ -1.87
SDC2-204ENST00000519914 ENHOQ6UWT2 76 aa3.38□□□□□ -1.87
SDC2-204ENST00000519914 Q8N814 137 aa3.38□□□□□ -1.87
SDC2-204ENST00000519914 Q9HAA7 133 aa3.38□□□□□ -1.87
SDC2-204ENST00000519914 ORMDL1Q9P0S3 153 aa3.38□□□□□ -1.87
SDC2-204ENST00000519914 H7BZZ5 65 aa3.37□□□□□ -1.87
SDC2-204ENST00000519914 TMEM256-PLSCR3K7ERE1 68 aa3.37□□□□□ -1.87
SDC2-204ENST00000519914 NDUFS5O43920 106 aa3.37□□□□□ -1.87
SDC2-204ENST00000519914 CLPSL2Q6UWE3 100 aa3.37□□□□□ -1.87
SDC2-204ENST00000519914 LINC00575Q6W349 94 aa3.37□□□□□ -1.87
SDC2-204ENST00000519914 Q8NDZ9 215 aa3.37□□□□□ -1.87
SDC2-204ENST00000519914 UBL5Q9BZL1 73 aa3.37□□□□□ -1.87
SDC2-204ENST00000519914 DYNC2H1Q8NCM8 4307 aaKnown RBP3.37□□□□□ -1.87
SDC2-204ENST00000519914 NSD1Q96L73 2696 aaPredicted RBP3.37□□□□□ -1.87
SDC2-204ENST00000519914 DEFB4AO15263 64 aa3.36□□□□□ -1.87
SDC2-204ENST00000519914 PDE6GP18545 87 aa3.36□□□□□ -1.87
SDC2-204ENST00000519914 C9orf129Q5T035 196 aaKnown RBP3.36□□□□□ -1.87
SDC2-204ENST00000519914 C10orf25Q5T742 122 aa3.36□□□□□ -1.87
SDC2-204ENST00000519914 UNQ6190/PRO20217Q6UXQ8 127 aa3.36□□□□□ -1.87
SDC2-204ENST00000519914 C20orf197Q8N268 126 aa3.36□□□□□ -1.87
SDC2-204ENST00000519914 RETNQ9HD89 108 aa3.36□□□□□ -1.87
SDC2-204ENST00000519914 HECTD1Q9ULT8 2610 aa3.35□□□□□ -1.87
SDC2-204ENST00000519914 IGLV10-54A0A075B6I4 117 aa3.35□□□□□ -1.87
SDC2-204ENST00000519914 LOC110117498A0A087WWA1 95 aa3.35□□□□□ -1.87
SDC2-204ENST00000519914 KRTAP21-3Q3LHN1 58 aa3.35□□□□□ -1.87
SDC2-204ENST00000519914 LINC01556Q5JQF7 62 aa3.35□□□□□ -1.87
SDC2-204ENST00000519914 FP248Q71RG6 208 aaPredicted RBP3.35□□□□□ -1.87
SDC2-204ENST00000519914 C6orf223Q8N319 242 aa3.35□□□□□ -1.87
SDC2-204ENST00000519914 C14orf132Q9NPU4 83 aa3.35□□□□□ -1.87
SDC2-204ENST00000519914 C6orf48Q9UBA6 75 aa3.35□□□□□ -1.87
SDC2-204ENST00000519914 KLK12Q9UKR0 248 aa3.35□□□□□ -1.87
SDC2-204ENST00000519914 NCR3O14931 201 aa3.34□□□□□ -1.87
SDC2-204ENST00000519914 ESRGQ1W209 222 aa3.34□□□□□ -1.87
SDC2-204ENST00000519914 C6orf99Q4VX62 202 aa3.34□□□□□ -1.87
SDC2-204ENST00000519914 C9orf116Q5BN46 136 aaPredicted RBP3.34□□□□□ -1.87
SDC2-204ENST00000519914 KPRPQ5T749 579 aaPredicted RBP3.34□□□□□ -1.87
SDC2-204ENST00000519914 LINC00846Q9NV44 126 aa3.34□□□□□ -1.87
SDC2-204ENST00000519914 OTOGQ6ZRI0 2925 aa3.33□□□□□ -1.88
SDC2-204ENST00000519914 NIPBLQ6KC79 2804 aaeCLIP3.33□□□□□ -1.88
SDC2-204ENST00000519914 VPREB1P12018 145 aa3.33□□□□□ -1.88
SDC2-204ENST00000519914 KRTAP10-6P60371 365 aaPredicted RBP3.33□□□□□ -1.88
SDC2-204ENST00000519914 PRR3P79522 188 aaKnown RBP3.33□□□□□ -1.88
SDC2-204ENST00000519914 CXCL6P80162 114 aa3.33□□□□□ -1.88
SDC2-204ENST00000519914 Q1T7F1 81 aa3.33□□□□□ -1.88
SDC2-204ENST00000519914 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
SDC2-204ENST00000519914 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.33□□□□□ -1.88
SDC2-204ENST00000519914 C15orf56Q8N910 161 aa3.33□□□□□ -1.88
SDC2-204ENST00000519914 DNAH9Q9NYC9 4486 aa3.33□□□□□ -1.88
SDC2-204ENST00000519914 TRAV23DV6A0A075B6W5 121 aa3.32□□□□□ -1.88
SDC2-204ENST00000519914 IGKV3D-7A0A0C4DH55 119 aa3.32□□□□□ -1.88
SDC2-204ENST00000519914 M0R378 163 aa3.32□□□□□ -1.88
SDC2-204ENST00000519914 TLX1NBP0CAT3 122 aa3.32□□□□□ -1.88
SDC2-204ENST00000519914 DNAH10OSP0CZ25 163 aa3.32□□□□□ -1.88
SDC2-204ENST00000519914 HTN3P15516 51 aa3.32□□□□□ -1.88
SDC2-204ENST00000519914 ELOF1P60002 83 aaKnown RBP3.32□□□□□ -1.88
SDC2-204ENST00000519914 UBE2BP63146 152 aa3.32□□□□□ -1.88
SDC2-204ENST00000519914 Q6ZQT0 140 aa3.32□□□□□ -1.88
SDC2-204ENST00000519914 Q6ZTC4 211 aa3.32□□□□□ -1.88
SDC2-204ENST00000519914 WFDC10BQ8IUB3 73 aa3.32□□□□□ -1.88
SDC2-204ENST00000519914 DIRC1Q969H9 104 aa3.32□□□□□ -1.88
SDC2-204ENST00000519914 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
SDC2-204ENST00000519914 CYSTM1Q9H1C7 97 aa3.32□□□□□ -1.88
SDC2-204ENST00000519914 VWFP04275 2813 aa3.32□□□□□ -1.88
SDC2-204ENST00000519914 IGLV5-37A0A075B6J1 123 aa3.31□□□□□ -1.88
SDC2-204ENST00000519914 TRBV7-4A0A0J9YYF1 115 aa3.31□□□□□ -1.88
SDC2-204ENST00000519914 F8WEM9 126 aa3.31□□□□□ -1.88
SDC2-204ENST00000519914 ZNF73O43830 326 aaPredicted RBP3.31□□□□□ -1.88
SDC2-204ENST00000519914 KRTAP24-1Q3LI83 254 aa3.31□□□□□ -1.88
SDC2-204ENST00000519914 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
SDC2-204ENST00000519914 KTN1-AS1Q86SY8 53 aa3.31□□□□□ -1.88
SDC2-204ENST00000519914 HIVEP1P15822 2718 aa3.31□□□□□ -1.88
SDC2-204ENST00000519914 COX7BP24311 80 aa3.3□□□□□ -1.88
SDC2-204ENST00000519914 CAMK2N2Q96S95 79 aa3.3□□□□□ -1.88
SDC2-204ENST00000519914 TM2D3Q9BRN9 247 aa3.3□□□□□ -1.88
SDC2-204ENST00000519914 FUSP35637 526 aaKnown RBP eCLIP3.29□□□□□ -1.88
SDC2-204ENST00000519914 C11orf45Q8TAV5 145 aa3.29□□□□□ -1.88
SDC2-204ENST00000519914 KCNQ1DNQ9H478 68 aa3.29□□□□□ -1.88
SDC2-204ENST00000519914 NBEAL2Q6ZNJ1 2754 aa3.28□□□□□ -1.88
SDC2-204ENST00000519914 DEFB131BA0A096LNP1 70 aa3.28□□□□□ -1.88
SDC2-204ENST00000519914 TRAV10A0A0B4J240 114 aa3.28□□□□□ -1.88
SDC2-204ENST00000519914 ATP11AUNQ6ZP68 121 aa3.28□□□□□ -1.88
SDC2-204ENST00000519914 Q6ZQY7 126 aa3.28□□□□□ -1.88
SDC2-204ENST00000519914 Q6ZRP5 223 aa3.28□□□□□ -1.88
SDC2-204ENST00000519914 PHF5AQ7RTV0 110 aaKnown RBP3.28□□□□□ -1.88
SDC2-204ENST00000519914 ATRQ13535 2644 aa3.28□□□□□ -1.88
SDC2-204ENST00000519914 PLECQ15149 4684 aaKnown RBP3.28□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms