RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 VWFP04275 2813 aa4.93□□□□□ -1.62
CLIP1-205ENST00000514271 TRGV1A0A0A0MS02 117 aa4.93□□□□□ -1.62
CLIP1-205ENST00000514271 CIRBPQ14011 172 aaKnown RBP4.92□□□□□ -1.62
CLIP1-205ENST00000514271 SND1-IT1Q9HBX3 110 aa4.92□□□□□ -1.62
CLIP1-205ENST00000514271 A8MUN3 132 aa4.92□□□□□ -1.62
CLIP1-205ENST00000514271 LINC00575Q6W349 94 aa4.92□□□□□ -1.62
CLIP1-205ENST00000514271 NOTCH3Q9UM47 2321 aa4.92□□□□□ -1.62
CLIP1-205ENST00000514271 GVQW2A0A096LPI5 108 aaPredicted RBP4.92□□□□□ -1.62
CLIP1-205ENST00000514271 NCR3O14931 201 aa4.92□□□□□ -1.62
CLIP1-205ENST00000514271 ZCCHC13Q8WW36 166 aaKnown RBP4.92□□□□□ -1.62
CLIP1-205ENST00000514271 M0R378 163 aa4.91□□□□□ -1.62
CLIP1-205ENST00000514271 XCL1P47992 114 aa4.91□□□□□ -1.62
CLIP1-205ENST00000514271 Q6ZTC4 211 aa4.91□□□□□ -1.62
CLIP1-205ENST00000514271 APLNQ9ULZ1 77 aa4.91□□□□□ -1.62
CLIP1-205ENST00000514271 TRAV7A0A075B6U4 112 aa4.91□□□□□ -1.62
CLIP1-205ENST00000514271 HECTD4Q9Y4D8 3996 aa4.91□□□□□ -1.62
CLIP1-205ENST00000514271 IGHV3-73A0A0B4J1V6 119 aa4.91□□□□□ -1.62
CLIP1-205ENST00000514271 TRGV4A0A0C4DH28 118 aa4.91□□□□□ -1.62
CLIP1-205ENST00000514271 H0Y9J4 135 aa4.91□□□□□ -1.62
CLIP1-205ENST00000514271 KRTAP26-1Q6PEX3 210 aa4.91□□□□□ -1.62
CLIP1-205ENST00000514271 JMJD7-PLA2G4BH0Y9G9 81 aa4.9□□□□□ -1.62
CLIP1-205ENST00000514271 PKD1L1Q8TDX9 2849 aa4.9□□□□□ -1.63
CLIP1-205ENST00000514271 LINC00959A0A1B0GUT2 108 aa4.9□□□□□ -1.63
CLIP1-205ENST00000514271 Q6ZTI0 123 aa4.9□□□□□ -1.63
CLIP1-205ENST00000514271 TRBV6-8A0A0A6YYG3 113 aa4.89□□□□□ -1.63
CLIP1-205ENST00000514271 ZNF73O43830 326 aaPredicted RBP4.89□□□□□ -1.63
CLIP1-205ENST00000514271 DEFB130BP0DP73 79 aa4.89□□□□□ -1.63
CLIP1-205ENST00000514271 DEFB130AP0DP74 79 aa4.89□□□□□ -1.63
CLIP1-205ENST00000514271 HTN1P15515 57 aa4.89□□□□□ -1.63
CLIP1-205ENST00000514271 OCR1Q9BZK8 76 aa4.89□□□□□ -1.63
CLIP1-205ENST00000514271 ORMDL1Q9P0S3 153 aa4.89□□□□□ -1.63
CLIP1-205ENST00000514271 DNAH10Q8IVF4 4471 aa4.89□□□□□ -1.63
CLIP1-205ENST00000514271 HUWE1Q7Z6Z7 4374 aaKnown RBP4.89□□□□□ -1.63
CLIP1-205ENST00000514271 LINC01547P58512 204 aaPredicted RBP4.89□□□□□ -1.63
CLIP1-205ENST00000514271 MEGF8Q7Z7M0 2845 aa4.88□□□□□ -1.63
CLIP1-205ENST00000514271 NBEAL1Q6ZS30 2694 aa4.88□□□□□ -1.63
CLIP1-205ENST00000514271 RPL36AP83881 106 aaKnown RBP4.88□□□□□ -1.63
CLIP1-205ENST00000514271 RPL36ALQ969Q0 106 aaKnown RBP4.88□□□□□ -1.63
CLIP1-205ENST00000514271 TMEM256-PLSCR3K7ERE1 68 aa4.87□□□□□ -1.63
CLIP1-205ENST00000514271 LECT2O14960 151 aa4.87□□□□□ -1.63
CLIP1-205ENST00000514271 LINC00476Q8WZB0 136 aa4.87□□□□□ -1.63
CLIP1-205ENST00000514271 DNAH17Q9UFH2 4485 aa4.87□□□□□ -1.63
CLIP1-205ENST00000514271 DEFB4AO15263 64 aa4.87□□□□□ -1.63
CLIP1-205ENST00000514271 CRPP02741 224 aa4.87□□□□□ -1.63
CLIP1-205ENST00000514271 LINC00313P59037 77 aa4.87□□□□□ -1.63
CLIP1-205ENST00000514271 DNAH8Q96JB1 4490 aa4.87□□□□□ -1.63
CLIP1-205ENST00000514271 PRR34Q9NV39 138 aa4.87□□□□□ -1.63
CLIP1-205ENST00000514271 UBE2DNLQ8IWF7 75 aa4.86□□□□□ -1.63
CLIP1-205ENST00000514271 IGKV3D-7A0A0C4DH55 119 aa4.86□□□□□ -1.63
CLIP1-205ENST00000514271 MP68P56378 58 aa4.86□□□□□ -1.63
CLIP1-205ENST00000514271 FAM229BQ4G0N7 80 aa4.85□□□□□ -1.63
CLIP1-205ENST00000514271 TMEM243Q9BU79 118 aa4.85□□□□□ -1.63
CLIP1-205ENST00000514271 C6orf99Q4VX62 202 aa4.85□□□□□ -1.63
CLIP1-205ENST00000514271 LELP1Q5T871 98 aa4.85□□□□□ -1.63
CLIP1-205ENST00000514271 KRTAP9-2Q9BYQ4 174 aa4.85□□□□□ -1.63
CLIP1-205ENST00000514271 NOTCH1P46531 2555 aa4.85□□□□□ -1.63
CLIP1-205ENST00000514271 KRTAP4-16G5E9R7 235 aaPredicted RBP4.85□□□□□ -1.63
CLIP1-205ENST00000514271 UBE2L6O14933 153 aa4.85□□□□□ -1.63
CLIP1-205ENST00000514271 SLPIP03973 132 aa4.85□□□□□ -1.63
CLIP1-205ENST00000514271 IGKV4-1P06312 121 aa4.85□□□□□ -1.63
CLIP1-205ENST00000514271 HTN3P15516 51 aa4.85□□□□□ -1.63
CLIP1-205ENST00000514271 ATP5EP56381 51 aaPredicted RBP4.85□□□□□ -1.63
CLIP1-205ENST00000514271 REG3AQ06141 175 aa4.85□□□□□ -1.63
CLIP1-205ENST00000514271 A0A096LPF7 62 aa4.84□□□□□ -1.63
CLIP1-205ENST00000514271 PRR3P79522 188 aaKnown RBP4.84□□□□□ -1.63
CLIP1-205ENST00000514271 S100A7L2Q5SY68 101 aa4.84□□□□□ -1.64
CLIP1-205ENST00000514271 LINC00474Q9P2X8 69 aa4.84□□□□□ -1.64
CLIP1-205ENST00000514271 H3BQ85 93 aa4.83□□□□□ -1.64
CLIP1-205ENST00000514271 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.83□□□□□ -1.64
CLIP1-205ENST00000514271 ELOF1P60002 83 aaKnown RBP4.83□□□□□ -1.64
CLIP1-205ENST00000514271 LCA10Q71F78 164 aa4.83□□□□□ -1.64
CLIP1-205ENST00000514271 ZNF706Q9Y5V0 76 aaPredicted RBP4.83□□□□□ -1.64
CLIP1-205ENST00000514271 KRTAP9-6A0A140TA67 174 aa4.82□□□□□ -1.64
CLIP1-205ENST00000514271 DNAL4O96015 105 aa4.82□□□□□ -1.64
CLIP1-205ENST00000514271 ENHOQ6UWT2 76 aa4.82□□□□□ -1.64
CLIP1-205ENST00000514271 RMI2Q96E14 147 aa4.82□□□□□ -1.64
CLIP1-205ENST00000514271 DNAH10OSP0CZ25 163 aa4.82□□□□□ -1.64
CLIP1-205ENST00000514271 TENM2Q9NT68 2774 aa4.81□□□□□ -1.64
CLIP1-205ENST00000514271 IGLV5-48A0A075B6I7 105 aa4.81□□□□□ -1.64
CLIP1-205ENST00000514271 NDUFC1O43677 76 aa4.81□□□□□ -1.64
CLIP1-205ENST00000514271 SEC61BP60468 96 aaKnown RBP4.81□□□□□ -1.64
CLIP1-205ENST00000514271 LINC01556Q5JQF7 62 aa4.81□□□□□ -1.64
CLIP1-205ENST00000514271 PHF5AQ7RTV0 110 aaKnown RBP4.81□□□□□ -1.64
CLIP1-205ENST00000514271 LINC00588Q9Y4M8 146 aa4.81□□□□□ -1.64
CLIP1-205ENST00000514271 CHCHD10Q8WYQ3 142 aaPredicted RBP4.81□□□□□ -1.64
CLIP1-205ENST00000514271 Q8N3U1 123 aa4.8□□□□□ -1.64
CLIP1-205ENST00000514271 PDE6GP18545 87 aa4.8□□□□□ -1.64
CLIP1-205ENST00000514271 Q1T7F1 81 aa4.8□□□□□ -1.64
CLIP1-205ENST00000514271 NBDYA0A0U1RRE5 68 aa4.79□□□□□ -1.64
CLIP1-205ENST00000514271 LY6G6CO95867 125 aa4.79□□□□□ -1.64
CLIP1-205ENST00000514271 ESRGQ1W209 222 aa4.79□□□□□ -1.64
CLIP1-205ENST00000514271 Q6ZR54 194 aa4.79□□□□□ -1.64
CLIP1-205ENST00000514271 A0A1B0GW54 56 aa4.78□□□□□ -1.64
CLIP1-205ENST00000514271 C10orf25Q5T742 122 aa4.78□□□□□ -1.64
CLIP1-205ENST00000514271 TRAV23DV6A0A075B6W5 121 aa4.78□□□□□ -1.64
CLIP1-205ENST00000514271 IGHV6-1A0A0B4J1U7 121 aa4.77□□□□□ -1.65
CLIP1-205ENST00000514271 SPRR1AP35321 89 aa4.77□□□□□ -1.65
CLIP1-205ENST00000514271 RBM3P98179 157 aaKnown RBP4.77□□□□□ -1.65
CLIP1-205ENST00000514271 KRTAP7-1Q8IUC3 87 aa4.77□□□□□ -1.65
CLIP1-205ENST00000514271 CYP4F30PQ9H0H9 118 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms