RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 K7EQZ3 153 aa0.5□□□□□ -2.33
XRCC4-204ENST00000509268 WFDC9Q8NEX5 89 aa0.5□□□□□ -2.33
XRCC4-204ENST00000509268 F8P00451 2351 aa0.5□□□□□ -2.33
XRCC4-204ENST00000509268 KALRNO60229 2985 aa0.5□□□□□ -2.33
XRCC4-204ENST00000509268 FLNAP21333 2647 aaKnown RBP0.5□□□□□ -2.33
XRCC4-204ENST00000509268 DOPEY2Q9Y3R5 2298 aa0.5□□□□□ -2.33
XRCC4-204ENST00000509268 BPTFQ12830 3046 aa0.5□□□□□ -2.33
XRCC4-204ENST00000509268 ATRQ13535 2644 aa0.5□□□□□ -2.33
XRCC4-204ENST00000509268 MROH1Q8NDA8 1641 aa0.5□□□□□ -2.33
XRCC4-204ENST00000509268 KMT2CQ8NEZ4 4911 aaKnown RBP0.49□□□□□ -2.33
XRCC4-204ENST00000509268 MAGI3Q5TCQ9 1506 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 NDUFB1O75438 58 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 COX7BP24311 80 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 PIGYQ3MUY2 71 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 HILPDAQ9Y5L2 63 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 CACNA1EQ15878 2313 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 UBR5O95071 2799 aaPredicted RBP0.49□□□□□ -2.33
XRCC4-204ENST00000509268 FBN2P35556 2912 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 NBEAL1Q6ZS30 2694 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 SCN11AQ9UI33 1791 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 MAP1BP46821 2468 aaKnown RBP0.49□□□□□ -2.33
XRCC4-204ENST00000509268 CELSR3Q9NYQ7 3312 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 LMTK2Q8IWU2 1503 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 USF3Q68DE3 2245 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 LCE6AA0A183 80 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 H3BVH4 76 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 NREPQ16612 68 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 Q8IZM0 81 aa0.49□□□□□ -2.33
XRCC4-204ENST00000509268 INO80Q9ULG1 1556 aaPredicted RBP0.48□□□□□ -2.33
XRCC4-204ENST00000509268 FLNCQ14315 2725 aa0.48□□□□□ -2.33
XRCC4-204ENST00000509268 CHD9Q3L8U1 2897 aa0.48□□□□□ -2.33
XRCC4-204ENST00000509268 UBR3Q6ZT12 1888 aa0.48□□□□□ -2.33
XRCC4-204ENST00000509268 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.48□□□□□ -2.335e-6■■■■□ 22.8
XRCC4-204ENST00000509268 ITSN2Q9NZM3 1697 aa0.48□□□□□ -2.33
XRCC4-204ENST00000509268 ASXL1Q8IXJ9 1541 aa0.48□□□□□ -2.33
XRCC4-204ENST00000509268 LRRC37AA6NMS7 1700 aa0.48□□□□□ -2.33
XRCC4-204ENST00000509268 COX8AP10176 69 aa0.48□□□□□ -2.33
XRCC4-204ENST00000509268 LAMA2P24043 3122 aaKnown RBP0.48□□□□□ -2.33
XRCC4-204ENST00000509268 ABCA10Q8WWZ4 1543 aa0.47□□□□□ -2.33
XRCC4-204ENST00000509268 POLR1AO95602 1720 aaPredicted RBP0.47□□□□□ -2.33
XRCC4-204ENST00000509268 DOT1LQ8TEK3 1739 aa0.47□□□□□ -2.33
XRCC4-204ENST00000509268 GLI2P10070 1586 aa0.47□□□□□ -2.33
XRCC4-204ENST00000509268 DIP2AQ14689 1571 aa0.47□□□□□ -2.33
XRCC4-204ENST00000509268 EPPK1P58107 5090 aaKnown RBP0.47□□□□□ -2.33
XRCC4-204ENST00000509268 FXYD6-FXYD2A0A087WZ82 144 aa0.47□□□□□ -2.33
XRCC4-204ENST00000509268 PRXQ9BXM0 1461 aa0.47□□□□□ -2.33
XRCC4-204ENST00000509268 CEP295Q9C0D2 2601 aa0.47□□□□□ -2.33
XRCC4-204ENST00000509268 APCP25054 2843 aa0.47□□□□□ -2.33
XRCC4-204ENST00000509268 PARP4Q9UKK3 1724 aaKnown RBP0.47□□□□□ -2.33
XRCC4-204ENST00000509268 PTPRZ1P23471 2315 aaPredicted RBP0.47□□□□□ -2.33
XRCC4-204ENST00000509268 CDC42BPGQ6DT37 1551 aa0.47□□□□□ -2.33
XRCC4-204ENST00000509268 ITPR1Q14643 2758 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 AKAP13Q12802 2813 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 NESP48681 1621 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 RYR3Q15413 4870 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 PCNX1Q96RV3 2341 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 SPTY2D1-AS1A0A0U1RR47 76 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 CPSF4LA6NMK7 179 aaKnown RBP0.46□□□□□ -2.34
XRCC4-204ENST00000509268 KRTAP2-3P0C7H8 128 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 KRTAP2-4Q9BYR9 128 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 QSER1Q2KHR3 1735 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 FMN2Q9NZ56 1722 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 SPTBN1Q01082 2364 aaKnown RBP0.46□□□□□ -2.34
XRCC4-204ENST00000509268 GVINP1Q7Z2Y8 2422 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 PCNTO95613 3336 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 COL14A1Q05707 1796 aaKnown RBP0.46□□□□□ -2.34
XRCC4-204ENST00000509268 CELSR2Q9HCU4 2923 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 TSC2P49815 1807 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 UTP20O75691 2785 aaKnown RBP0.46□□□□□ -2.34
XRCC4-204ENST00000509268 TEX15Q9BXT5 2789 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 HFM1A2PYH4 1435 aa0.46□□□□□ -2.34
XRCC4-204ENST00000509268 CFAP46Q8IYW2 2715 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 TLN1Q9Y490 2541 aaKnown RBP0.45□□□□□ -2.34
XRCC4-204ENST00000509268 EFCAB5A4FU69 1503 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 A0A087WWC5 75 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 I3L3M4 83 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 SPRR1AP35321 89 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 USMG5Q96IX5 58 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 PTPRQQ9UMZ3 2332 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 REV3LO60673 3130 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 HERC1Q15751 4861 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 PREX2Q70Z35 1606 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 ABCA9Q8IUA7 1624 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 BIVM-ERCC5R4GMW8 1640 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 WIZO95785 1651 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 PKD1L1Q8TDX9 2849 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 ANKRD50Q9ULJ7 1429 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 TIAM2Q8IVF5 1701 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 ZFHX4Q86UP3 3567 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 RIF1Q5UIP0 2472 aaKnown RBP0.45□□□□□ -2.34
XRCC4-204ENST00000509268 COX6B1P14854 86 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 Q5VSD8 79 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 KRTAP19-3Q7Z4W3 81 aa0.45□□□□□ -2.34
XRCC4-204ENST00000509268 MRPL34Q9BQ48 92 aaKnown RBP0.45□□□□□ -2.34
XRCC4-204ENST00000509268 STAB2Q8WWQ8 2551 aa0.44□□□□□ -2.34
XRCC4-204ENST00000509268 MROH2AA6NES4 1674 aa0.44□□□□□ -2.34
XRCC4-204ENST00000509268 ABCA13Q86UQ4 5058 aa0.44□□□□□ -2.34
XRCC4-204ENST00000509268 BCORQ6W2J9 1755 aa0.44□□□□□ -2.34
XRCC4-204ENST00000509268 CNOT1A5YKK6 2376 aaKnown RBP0.44□□□□□ -2.34
XRCC4-204ENST00000509268 EP300Q09472 2414 aaPredicted RBP0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms