RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 SPRR1AP35321 89 aa11.35□□□□□ -0.59
SFXN1-208ENST00000507823 VPS13DQ5THJ4 4388 aa11.35□□□□□ -0.59
SFXN1-208ENST00000507823 IGLV1-50A0A075B6I6 118 aa11.35□□□□□ -0.59
SFXN1-208ENST00000507823 KRTAP4-16G5E9R7 235 aaPredicted RBP11.35□□□□□ -0.59
SFXN1-208ENST00000507823 PRYO14603 147 aa11.35□□□□□ -0.59
SFXN1-208ENST00000507823 FAM168BA1KXE4 195 aa11.34□□□□□ -0.59
SFXN1-208ENST00000507823 LINC00846Q9NV44 126 aa11.34□□□□□ -0.59
SFXN1-208ENST00000507823 RBM3P98179 157 aaKnown RBP11.33□□□□□ -0.6
SFXN1-208ENST00000507823 C14orf177Q52M58 125 aa11.33□□□□□ -0.6
SFXN1-208ENST00000507823 Q6ZQT0 140 aa11.32□□□□□ -0.6
SFXN1-208ENST00000507823 NBDYA0A0U1RRE5 68 aa11.31□□□□□ -0.6
SFXN1-208ENST00000507823 PSCAO43653 123 aa11.3□□□□□ -0.6
SFXN1-208ENST00000507823 PDE6GP18545 87 aa11.3□□□□□ -0.6
SFXN1-208ENST00000507823 LAMTOR3Q9UHA4 124 aa11.3□□□□□ -0.6
SFXN1-208ENST00000507823 A0A1B0GV72 72 aa11.3□□□□□ -0.6
SFXN1-208ENST00000507823 C16orf90A8MZG2 172 aa11.3□□□□□ -0.6
SFXN1-208ENST00000507823 DNHD1Q96M86 4753 aa11.3□□□□□ -0.6
SFXN1-208ENST00000507823 Q6JHZ5 121 aa11.29□□□□□ -0.6
SFXN1-208ENST00000507823 MRPL55Q7Z7F7 128 aaKnown RBP11.29□□□□□ -0.6
SFXN1-208ENST00000507823 NDUFV3P56181 108 aaKnown RBP11.29□□□□□ -0.6
SFXN1-208ENST00000507823 STARD9Q9P2P6 4700 aa11.29□□□□□ -0.6
SFXN1-208ENST00000507823 B5MCH6 92 aa11.28□□□□□ -0.6
SFXN1-208ENST00000507823 Q6ZRN7 208 aaPredicted RBP11.28□□□□□ -0.6
SFXN1-208ENST00000507823 Q6ZRX8 168 aa11.28□□□□□ -0.6
SFXN1-208ENST00000507823 LRCOL1A6NCL2 159 aa11.27□□□□□ -0.6
SFXN1-208ENST00000507823 TRBV7-4A0A0J9YYF1 115 aa11.27□□□□□ -0.61
SFXN1-208ENST00000507823 DHRS4-AS1Q9P1J3 65 aa11.27□□□□□ -0.61
SFXN1-208ENST00000507823 A0A096LNI7 61 aa11.26□□□□□ -0.61
SFXN1-208ENST00000507823 RPL37AP8A6NKH3 93 aa11.25□□□□□ -0.61
SFXN1-208ENST00000507823 FAM19A5Q7Z5A7 132 aaPredicted RBP11.25□□□□□ -0.61
SFXN1-208ENST00000507823 DSCR8Q96T75 97 aa11.25□□□□□ -0.61
SFXN1-208ENST00000507823 Q9BRP9 147 aa11.23□□□□□ -0.61
SFXN1-208ENST00000507823 LINC01547P58512 204 aaPredicted RBP11.22□□□□□ -0.61
SFXN1-208ENST00000507823 ANAPC13Q9BS18 74 aa11.22□□□□□ -0.61
SFXN1-208ENST00000507823 ETDCA0A1B0GVM5 59 aa11.22□□□□□ -0.61
SFXN1-208ENST00000507823 C9orf163Q8N9P6 203 aa11.21□□□□□ -0.61
SFXN1-208ENST00000507823 ATP5EP2Q5VTU8 51 aa11.21□□□□□ -0.62
SFXN1-208ENST00000507823 PKIGQ9Y2B9 76 aa11.21□□□□□ -0.62
SFXN1-208ENST00000507823 Q8N377 158 aa11.2□□□□□ -0.62
SFXN1-208ENST00000507823 A0A1W2PNN7 141 aa11.2□□□□□ -0.62
SFXN1-208ENST00000507823 TENM2Q9NT68 2774 aa11.19□□□□□ -0.62
SFXN1-208ENST00000507823 MEGF8Q7Z7M0 2845 aa11.19□□□□□ -0.62
SFXN1-208ENST00000507823 IGLV5-48A0A075B6I7 105 aa11.19□□□□□ -0.62
SFXN1-208ENST00000507823 M0R2N4 97 aa11.19□□□□□ -0.62
SFXN1-208ENST00000507823 REG3GQ6UW15 175 aa11.19□□□□□ -0.62
SFXN1-208ENST00000507823 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.17□□□□□ -0.62
SFXN1-208ENST00000507823 HIST1H4AP62805 103 aaKnown RBP11.17□□□□□ -0.62
SFXN1-208ENST00000507823 UBL5Q9BZL1 73 aa11.17□□□□□ -0.62
SFXN1-208ENST00000507823 IGKV3D-7A0A0C4DH55 119 aa11.16□□□□□ -0.62
SFXN1-208ENST00000507823 IGKV2-24A0A0C4DH68 120 aa11.16□□□□□ -0.62
SFXN1-208ENST00000507823 FAM236AA0A1B0GUQ0 79 aa11.16□□□□□ -0.62
SFXN1-208ENST00000507823 FAM236BA0A1B0GV22 79 aa11.16□□□□□ -0.62
SFXN1-208ENST00000507823 TNP2Q05952 138 aa11.13□□□□□ -0.63
SFXN1-208ENST00000507823 Q6ZR54 194 aa11.13□□□□□ -0.63
SFXN1-208ENST00000507823 ERC2-IT1O76042 136 aa11.11□□□□□ -0.63
SFXN1-208ENST00000507823 LINC00474Q9P2X8 69 aa11.11□□□□□ -0.63
SFXN1-208ENST00000507823 Q6ZVQ6 151 aa11.11□□□□□ -0.63
SFXN1-208ENST00000507823 DNAH6Q9C0G6 4158 aa11.1□□□□□ -0.63
SFXN1-208ENST00000507823 EPM2AB3EWF7 344 aa11.1□□□□□ -0.63
SFXN1-208ENST00000507823 CHTF8P0CG12 524 aa11.1□□□□□ -0.63
SFXN1-208ENST00000507823 ST20-AS1Q8NBB2 130 aa11.09□□□□□ -0.63
SFXN1-208ENST00000507823 DEFB105AQ8NG35 78 aa11.09□□□□□ -0.63
SFXN1-208ENST00000507823 DNAH17Q9UFH2 4485 aa11.08□□□□□ -0.63
SFXN1-208ENST00000507823 UBE2BP63146 152 aa11.08□□□□□ -0.64
SFXN1-208ENST00000507823 A0A087WTM6 91 aa11.07□□□□□ -0.64
SFXN1-208ENST00000507823 H0Y9J4 135 aa11.07□□□□□ -0.64
SFXN1-208ENST00000507823 A0A1B0GW54 56 aa11.06□□□□□ -0.64
SFXN1-208ENST00000507823 DNAH2Q9P225 4427 aa11.06□□□□□ -0.64
SFXN1-208ENST00000507823 CXCL6P80162 114 aa11.05□□□□□ -0.64
SFXN1-208ENST00000507823 PHF5AQ7RTV0 110 aaKnown RBP11.05□□□□□ -0.64
SFXN1-208ENST00000507823 KRTAP11-1Q8IUC1 163 aa11.05□□□□□ -0.64
SFXN1-208ENST00000507823 FAM19A1Q7Z5A9 133 aa11.04□□□□□ -0.64
SFXN1-208ENST00000507823 SMIM29Q86T20 159 aa11.04□□□□□ -0.64
SFXN1-208ENST00000507823 ATOX1O00244 68 aa11.04□□□□□ -0.64
SFXN1-208ENST00000507823 A0A087WVE0 104 aa11.03□□□□□ -0.64
SFXN1-208ENST00000507823 PANO1I0J062 215 aa11.03□□□□□ -0.64
SFXN1-208ENST00000507823 C3orf22Q8N5N4 141 aa11.03□□□□□ -0.64
SFXN1-208ENST00000507823 SPACA4Q8TDM5 124 aa11.03□□□□□ -0.64
SFXN1-208ENST00000507823 KMT2AQ03164 3969 aa11.03□□□□□ -0.64
SFXN1-208ENST00000507823 CCDC179H3BU77 68 aa11.02□□□□□ -0.65
SFXN1-208ENST00000507823 HECTD4Q9Y4D8 3996 aa11.01□□□□□ -0.65
SFXN1-208ENST00000507823 PRLHP81277 87 aa11.01□□□□□ -0.65
SFXN1-208ENST00000507823 A0A1W2PNM2 257 aa10.99□□□□□ -0.65
SFXN1-208ENST00000507823 C1orf137Q5JT78 98 aa10.99□□□□□ -0.65
SFXN1-208ENST00000507823 IGLV8-61A0A075B6I0 122 aa10.98□□□□□ -0.65
SFXN1-208ENST00000507823 HAMPP81172 84 aa10.98□□□□□ -0.65
SFXN1-208ENST00000507823 SPRR4Q96PI1 79 aa10.98□□□□□ -0.65
SFXN1-208ENST00000507823 FBN3Q75N90 2809 aa10.98□□□□□ -0.65
SFXN1-208ENST00000507823 SPRR1BP22528 89 aa10.97□□□□□ -0.65
SFXN1-208ENST00000507823 Q8NBF4 154 aa10.97□□□□□ -0.65
SFXN1-208ENST00000507823 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.97□□□□□ -0.65
SFXN1-208ENST00000507823 KRTAP13-1Q8IUC0 172 aa10.96□□□□□ -0.65
SFXN1-208ENST00000507823 FUSP35637 526 aaKnown RBP eCLIP10.96□□□□□ -0.66
SFXN1-208ENST00000507823 RTL8CO15255 209 aa10.95□□□□□ -0.66
SFXN1-208ENST00000507823 BCE1O60756 84 aa10.95□□□□□ -0.66
SFXN1-208ENST00000507823 ALMS1Q8TCU4 4167 aa10.95□□□□□ -0.66
SFXN1-208ENST00000507823 UQCRQO14949 82 aa10.94□□□□□ -0.66
SFXN1-208ENST00000507823 HIGD2AQ9BW72 106 aa10.94□□□□□ -0.66
SFXN1-208ENST00000507823 COX7CP15954 63 aa10.94□□□□□ -0.66
SFXN1-208ENST00000507823 C1orf134Q5TEV5 83 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms