RNA–Protein interactions for RNA: ENST00000505795.1

HMGN1P13-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 13, humanhuman

BASIC

Gene HMGN1P13, Length 138 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P13-201ENST00000505795 CLIP1P30622 1438 aa0.13□□□□□ -2.39
HMGN1P13-201ENST00000505795 WIZO95785 1651 aa0.12□□□□□ -2.39
HMGN1P13-201ENST00000505795 TNRC6CQ9HCJ0 1690 aaKnown RBP0.12□□□□□ -2.39
HMGN1P13-201ENST00000505795 MAST4O15021 2626 aa0.12□□□□□ -2.39
HMGN1P13-201ENST00000505795 SPTY2D1-AS1A0A0U1RR47 76 aa0.12□□□□□ -2.39
HMGN1P13-201ENST00000505795 CPSF4LA6NMK7 179 aaKnown RBP0.12□□□□□ -2.39
HMGN1P13-201ENST00000505795 H3BUT2 72 aa0.12□□□□□ -2.39
HMGN1P13-201ENST00000505795 SPINK1P00995 79 aa0.12□□□□□ -2.39
HMGN1P13-201ENST00000505795 DEFB105AQ8NG35 78 aa0.12□□□□□ -2.39
HMGN1P13-201ENST00000505795 C18orf32Q8TCD1 76 aa0.12□□□□□ -2.39
HMGN1P13-201ENST00000505795 U3KQA8 63 aa0.12□□□□□ -2.39
HMGN1P13-201ENST00000505795 IGF2RP11717 2491 aa0.12□□□□□ -2.39
HMGN1P13-201ENST00000505795 PKDREJQ9NTG1 2253 aa0.12□□□□□ -2.39
HMGN1P13-201ENST00000505795 ANKRD50Q9ULJ7 1429 aa0.12□□□□□ -2.39
HMGN1P13-201ENST00000505795 ADAMTS12P58397 1594 aa0.11□□□□□ -2.39
HMGN1P13-201ENST00000505795 FSIP2Q5CZC0 6907 aa0.11□□□□□ -2.39
HMGN1P13-201ENST00000505795 WNK2Q9Y3S1 2297 aa0.11□□□□□ -2.39
HMGN1P13-201ENST00000505795 IGSF10Q6WRI0 2623 aa0.11□□□□□ -2.39
HMGN1P13-201ENST00000505795 CCL22O00626 93 aa0.11□□□□□ -2.39
HMGN1P13-201ENST00000505795 PRM1P04553 51 aa0.11□□□□□ -2.39
HMGN1P13-201ENST00000505795 UGGT2Q9NYU1 1516 aa0.11□□□□□ -2.39
HMGN1P13-201ENST00000505795 CNOT1A5YKK6 2376 aaKnown RBP0.11□□□□□ -2.39
HMGN1P13-201ENST00000505795 PLCH1Q4KWH8 1693 aa0.11□□□□□ -2.39
HMGN1P13-201ENST00000505795 PLXNC1O60486 1568 aa0.11□□□□□ -2.39
HMGN1P13-201ENST00000505795 DNMBPQ6XZF7 1577 aa0.11□□□□□ -2.39
HMGN1P13-201ENST00000505795 PKD1L1Q8TDX9 2849 aa0.1□□□□□ -2.39
HMGN1P13-201ENST00000505795 PTPN13Q12923 2485 aa0.1□□□□□ -2.39
HMGN1P13-201ENST00000505795 I3L3M4 83 aa0.1□□□□□ -2.39
HMGN1P13-201ENST00000505795 NDUFB1O75438 58 aa0.1□□□□□ -2.39
HMGN1P13-201ENST00000505795 LELP1Q5T871 98 aa0.1□□□□□ -2.39
HMGN1P13-201ENST00000505795 COX6B2Q6YFQ2 88 aa0.1□□□□□ -2.39
HMGN1P13-201ENST00000505795 GAFA1Q96PS6 74 aa0.1□□□□□ -2.39
HMGN1P13-201ENST00000505795 UBR5O95071 2799 aaPredicted RBP0.1□□□□□ -2.39
HMGN1P13-201ENST00000505795 ITSN1Q15811 1721 aa0.1□□□□□ -2.39
HMGN1P13-201ENST00000505795 UBR3Q6ZT12 1888 aa0.1□□□□□ -2.39
HMGN1P13-201ENST00000505795 SPTA1P02549 2419 aa0.09□□□□□ -2.39
HMGN1P13-201ENST00000505795 ABCA2Q9BZC7 2435 aa0.09□□□□□ -2.39
HMGN1P13-201ENST00000505795 IFI6P09912 130 aa0.09□□□□□ -2.4
HMGN1P13-201ENST00000505795 SPRR2DP22532 72 aa0.09□□□□□ -2.4
HMGN1P13-201ENST00000505795 H1FX-AS1Q4G0G2 97 aa0.09□□□□□ -2.4
HMGN1P13-201ENST00000505795 CDC42BPGQ6DT37 1551 aa0.09□□□□□ -2.4
HMGN1P13-201ENST00000505795 C4AP0C0L4 1744 aa0.09□□□□□ -2.4
HMGN1P13-201ENST00000505795 C4BP0C0L5 1744 aa0.09□□□□□ -2.4
HMGN1P13-201ENST00000505795 RICTORQ6R327 1708 aa0.09□□□□□ -2.4
HMGN1P13-201ENST00000505795 EP300Q09472 2414 aaPredicted RBP0.08□□□□□ -2.4
HMGN1P13-201ENST00000505795 NHSQ6T4R5 1651 aa0.08□□□□□ -2.4
HMGN1P13-201ENST00000505795 CFDP00746 253 aaPredicted RBP0.08□□□□□ -2.4
HMGN1P13-201ENST00000505795 IFI27P40305 119 aaPredicted RBP0.08□□□□□ -2.4
HMGN1P13-201ENST00000505795 KLK9Q2XQG4 91 aa0.08□□□□□ -2.4
HMGN1P13-201ENST00000505795 ABCA9Q8IUA7 1624 aa0.08□□□□□ -2.4
HMGN1P13-201ENST00000505795 THOC2Q8NI27 1593 aaKnown RBP0.07□□□□□ -2.4
HMGN1P13-201ENST00000505795 HECTD4Q9Y4D8 3996 aa0.07□□□□□ -2.4
HMGN1P13-201ENST00000505795 UMAD1C9J7I0 102 aa0.07□□□□□ -2.4
HMGN1P13-201ENST00000505795 SPINK4O60575 86 aa0.07□□□□□ -2.4
HMGN1P13-201ENST00000505795 SMIM13P0DJ93 91 aa0.07□□□□□ -2.4
HMGN1P13-201ENST00000505795 NREPQ16612 68 aa0.07□□□□□ -2.4
HMGN1P13-201ENST00000505795 WFDC9Q8NEX5 89 aa0.07□□□□□ -2.4
HMGN1P13-201ENST00000505795 APLNQ9ULZ1 77 aa0.07□□□□□ -2.4
HMGN1P13-201ENST00000505795 ZC3H13Q5T200 1668 aaKnown RBP0.07□□□□□ -2.4
HMGN1P13-201ENST00000505795 PKD1P98161 4303 aa0.07□□□□□ -2.4
HMGN1P13-201ENST00000505795 HSPG2P98160 4391 aa0.07□□□□□ -2.4
HMGN1P13-201ENST00000505795 LMTK2Q8IWU2 1503 aa0.07□□□□□ -2.4
HMGN1P13-201ENST00000505795 ASXL1Q8IXJ9 1541 aa0.07□□□□□ -2.4
HMGN1P13-201ENST00000505795 DEPDC5O75140 1603 aa0.06□□□□□ -2.4
HMGN1P13-201ENST00000505795 PKHD1P08F94 4074 aa0.06□□□□□ -2.4
HMGN1P13-201ENST00000505795 CSPG4Q6UVK1 2322 aa0.06□□□□□ -2.4
HMGN1P13-201ENST00000505795 CHD8Q9HCK8 2581 aa0.06□□□□□ -2.4
HMGN1P13-201ENST00000505795 TJP1Q07157 1748 aa0.06□□□□□ -2.4
HMGN1P13-201ENST00000505795 DDX60LQ5H9U9 1706 aaKnown RBP0.06□□□□□ -2.4
HMGN1P13-201ENST00000505795 NRAPQ86VF7 1730 aa0.06□□□□□ -2.4
HMGN1P13-201ENST00000505795 TRANK1O15050 2925 aa0.06□□□□□ -2.4
HMGN1P13-201ENST00000505795 INO80Q9ULG1 1556 aaPredicted RBP0.06□□□□□ -2.4
HMGN1P13-201ENST00000505795 FLNCQ14315 2725 aa0.06□□□□□ -2.4
HMGN1P13-201ENST00000505795 SETXQ7Z333 2677 aaKnown RBP0.05□□□□□ -2.4
HMGN1P13-201ENST00000505795 DUOX2Q9NRD8 1548 aa0.05□□□□□ -2.4
HMGN1P13-201ENST00000505795 RPL38P63173 70 aaKnown RBP0.05□□□□□ -2.4
HMGN1P13-201ENST00000505795 DIP2AQ14689 1571 aa0.05□□□□□ -2.4
HMGN1P13-201ENST00000505795 HMCN2Q8NDA2 5059 aa0.05□□□□□ -2.4
HMGN1P13-201ENST00000505795 H0YAA0 97 aa0.04□□□□□ -2.4
HMGN1P13-201ENST00000505795 NDUFA4O00483 81 aa0.04□□□□□ -2.4
HMGN1P13-201ENST00000505795 NDUFA3O95167 84 aa0.04□□□□□ -2.4
HMGN1P13-201ENST00000505795 SPRR2BP35325 72 aa0.04□□□□□ -2.4
HMGN1P13-201ENST00000505795 WFDC13Q8IUB5 93 aa0.04□□□□□ -2.4
HMGN1P13-201ENST00000505795 SMCO4Q9NRQ5 59 aa0.04□□□□□ -2.4
HMGN1P13-201ENST00000505795 CDKN2A-AS1Q9UH64 79 aa0.04□□□□□ -2.4
HMGN1P13-201ENST00000505795 MROH1Q8NDA8 1641 aa0.04□□□□□ -2.4
HMGN1P13-201ENST00000505795 MADDQ8WXG6 1647 aa0.04□□□□□ -2.4
HMGN1P13-201ENST00000505795 DMBT1Q9UGM3 2413 aaPredicted RBP0.04□□□□□ -2.4
HMGN1P13-201ENST00000505795 AKAP13Q12802 2813 aa0.04□□□□□ -2.4
HMGN1P13-201ENST00000505795 COL7A1Q02388 2944 aa0.03□□□□□ -2.4
HMGN1P13-201ENST00000505795 RALGAPBQ86X10 1494 aa0.03□□□□□ -2.4
HMGN1P13-201ENST00000505795 EFCAB5A4FU69 1503 aa0.03□□□□□ -2.4
HMGN1P13-201ENST00000505795 KNL1Q8NG31 2342 aa0.03□□□□□ -2.4
HMGN1P13-201ENST00000505795 C3P01024 1663 aa0.03□□□□□ -2.4
HMGN1P13-201ENST00000505795 LRP2P98164 4655 aa0.03□□□□□ -2.4
HMGN1P13-201ENST00000505795 KCNQ1DNQ9H478 68 aa0.03□□□□□ -2.4
HMGN1P13-201ENST00000505795 COL6A3P12111 3177 aa0.02□□□□□ -2.41
HMGN1P13-201ENST00000505795 MAP1BP46821 2468 aaKnown RBP0.02□□□□□ -2.41
HMGN1P13-201ENST00000505795 DEFB131BA0A096LNP1 70 aa0.02□□□□□ -2.41
HMGN1P13-201ENST00000505795 LYNX1G3V0Z9 82 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms