RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 RGPD8O14715 1765 aaPredicted RBP-0.27□□□□□ -2.45
CHD1-203ENST00000505657 RGPD5Q99666 1765 aa-0.27□□□□□ -2.45
CHD1-203ENST00000505657 COX7BP24311 80 aa-0.27□□□□□ -2.45
CHD1-203ENST00000505657 PLGLAQ15195 96 aa-0.27□□□□□ -2.45
CHD1-203ENST00000505657 CDKN2A-AS1Q9UH64 79 aa-0.27□□□□□ -2.45
CHD1-203ENST00000505657 STAB2Q8WWQ8 2551 aa-0.27□□□□□ -2.45
CHD1-203ENST00000505657 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.27□□□□□ -2.45
CHD1-203ENST00000505657 PKHD1P08F94 4074 aa-0.28□□□□□ -2.45
CHD1-203ENST00000505657 ATP7BP35670 1465 aa-0.28□□□□□ -2.45
CHD1-203ENST00000505657 A0A1B0GUT8 65 aa-0.28□□□□□ -2.45
CHD1-203ENST00000505657 IQCF6A8MYZ5 107 aa-0.28□□□□□ -2.45
CHD1-203ENST00000505657 WFDC13Q8IUB5 93 aa-0.28□□□□□ -2.45
CHD1-203ENST00000505657 DOT1LQ8TEK3 1739 aa-0.28□□□□□ -2.45
CHD1-203ENST00000505657 ABCC3O15438 1527 aa-0.28□□□□□ -2.45
CHD1-203ENST00000505657 ZNF831Q5JPB2 1677 aa-0.29□□□□□ -2.46
CHD1-203ENST00000505657 C9orf62Q8N4C0 152 aa-0.29□□□□□ -2.46
CHD1-203ENST00000505657 V9GYS6 101 aa-0.29□□□□□ -2.46
CHD1-203ENST00000505657 KIF14Q15058 1648 aa-0.29□□□□□ -2.46
CHD1-203ENST00000505657 PDZD2O15018 2839 aa-0.29□□□□□ -2.46
CHD1-203ENST00000505657 LRRC9Q6ZRR7 1453 aa-0.29□□□□□ -2.46
CHD1-203ENST00000505657 SVEP1Q4LDE5 3571 aa-0.3□□□□□ -2.46
CHD1-203ENST00000505657 GAFA1Q96PS6 74 aa-0.3□□□□□ -2.46
CHD1-203ENST00000505657 SETD2Q9BYW2 2564 aaPredicted RBP-0.3□□□□□ -2.46
CHD1-203ENST00000505657 MAP3K4Q9Y6R4 1608 aa-0.31□□□□□ -2.46
CHD1-203ENST00000505657 FLGP20930 4061 aaPredicted RBP-0.31□□□□□ -2.46
CHD1-203ENST00000505657 AKAP13Q12802 2813 aa-0.31□□□□□ -2.46
CHD1-203ENST00000505657 K7EP34 96 aa-0.31□□□□□ -2.46
CHD1-203ENST00000505657 CYB5AP00167 134 aa-0.31□□□□□ -2.46
CHD1-203ENST00000505657 PYY3Q5JQD4 70 aa-0.31□□□□□ -2.46
CHD1-203ENST00000505657 S100A16Q96FQ6 103 aaKnown RBP-0.31□□□□□ -2.46
CHD1-203ENST00000505657 PRRC2CQ9Y520 2896 aaKnown RBP-0.31□□□□□ -2.46
CHD1-203ENST00000505657 TGP01266 2768 aa-0.31□□□□□ -2.46
CHD1-203ENST00000505657 SCN11AQ9UI33 1791 aa-0.32□□□□□ -2.46
CHD1-203ENST00000505657 MYMXA0A1B0GTQ4 84 aa-0.32□□□□□ -2.46
CHD1-203ENST00000505657 RPL38P63173 70 aaKnown RBP-0.32□□□□□ -2.46
CHD1-203ENST00000505657 WFDC9Q8NEX5 89 aa-0.32□□□□□ -2.46
CHD1-203ENST00000505657 NESP48681 1621 aa-0.32□□□□□ -2.46
CHD1-203ENST00000505657 ARFGEF2Q9Y6D5 1785 aa-0.33□□□□□ -2.46
CHD1-203ENST00000505657 PLIN4Q96Q06 1357 aa-0.33□□□□□ -2.46
CHD1-203ENST00000505657 TNRC18O15417 2968 aaPredicted RBP-0.33□□□□□ -2.46
CHD1-203ENST00000505657 SPTBN4Q9H254 2564 aa-0.34□□□□□ -2.46
CHD1-203ENST00000505657 TRAV21A0A0B4J279 112 aa-0.34□□□□□ -2.46
CHD1-203ENST00000505657 NDUFA3O95167 84 aa-0.34□□□□□ -2.46
CHD1-203ENST00000505657 LYSTQ99698 3801 aa-0.35□□□□□ -2.46
CHD1-203ENST00000505657 ADAMTS12P58397 1594 aa-0.35□□□□□ -2.47
CHD1-203ENST00000505657 PVALEFA0A1B0GWK0 134 aa-0.35□□□□□ -2.47
CHD1-203ENST00000505657 SNRPFP62306 86 aaKnown RBP-0.35□□□□□ -2.47
CHD1-203ENST00000505657 KRTAP19-7Q3SYF9 63 aa-0.35□□□□□ -2.47
CHD1-203ENST00000505657 USP32Q8NFA0 1604 aa-0.35□□□□□ -2.47
CHD1-203ENST00000505657 CICQ96RK0 1608 aaPredicted RBP-0.35□□□□□ -2.47
CHD1-203ENST00000505657 PTPN23Q9H3S7 1636 aa-0.35□□□□□ -2.47
CHD1-203ENST00000505657 KMT2CQ8NEZ4 4911 aaKnown RBP-0.35□□□□□ -2.47
CHD1-203ENST00000505657 NWD1Q149M9 1564 aa-0.36□□□□□ -2.47
CHD1-203ENST00000505657 PIK3C2BO00750 1634 aa-0.36□□□□□ -2.47
CHD1-203ENST00000505657 PCLOQ9Y6V0 5065 aa-0.36□□□□□ -2.47
CHD1-203ENST00000505657 LAMA5O15230 3695 aa-0.37□□□□□ -2.47
CHD1-203ENST00000505657 DDX60LQ5H9U9 1706 aaKnown RBP-0.37□□□□□ -2.47
CHD1-203ENST00000505657 CEBPZOSA8MTT3 80 aa-0.37□□□□□ -2.47
CHD1-203ENST00000505657 LINC00643Q86TS7 51 aa-0.37□□□□□ -2.47
CHD1-203ENST00000505657 CREBBPQ92793 2442 aa-0.38□□□□□ -2.47
CHD1-203ENST00000505657 H0YGG7 62 aa-0.38□□□□□ -2.47
CHD1-203ENST00000505657 KRTAP6-2Q3LI66 62 aa-0.38□□□□□ -2.47
CHD1-203ENST00000505657 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.38□□□□□ -2.47
CHD1-203ENST00000505657 ZZEF1O43149 2961 aa-0.38□□□□□ -2.47
CHD1-203ENST00000505657 HECTD1Q9ULT8 2610 aa-0.38□□□□□ -2.47
CHD1-203ENST00000505657 SPG11Q96JI7 2443 aa-0.38□□□□□ -2.47
CHD1-203ENST00000505657 NBPF19A0A087WUL8 3843 aa-0.39□□□□□ -2.47
CHD1-203ENST00000505657 PLCH1Q4KWH8 1693 aa-0.39□□□□□ -2.47
CHD1-203ENST00000505657 NCOA2Q15596 1464 aa-0.39□□□□□ -2.47
CHD1-203ENST00000505657 RABAC1Q9UI14 185 aa-0.39□□□□□ -2.47
CHD1-203ENST00000505657 PKD1P98161 4303 aa-0.39□□□□□ -2.47
CHD1-203ENST00000505657 HERC1Q15751 4861 aa-0.39□□□□□ -2.47
CHD1-203ENST00000505657 SMARCA2P51531 1590 aa-0.4□□□□□ -2.47
CHD1-203ENST00000505657 NF1P21359 2839 aa-0.4□□□□□ -2.47
CHD1-203ENST00000505657 TDRG1Q3Y452 100 aa-0.4□□□□□ -2.47
CHD1-203ENST00000505657 COX6B2Q6YFQ2 88 aa-0.4□□□□□ -2.47
CHD1-203ENST00000505657 MXRA5Q9NR99 2828 aa-0.4□□□□□ -2.47
CHD1-203ENST00000505657 CFAP43Q8NDM7 1665 aa-0.4□□□□□ -2.47
CHD1-203ENST00000505657 URB2Q14146 1524 aaKnown RBP-0.41□□□□□ -2.48
CHD1-203ENST00000505657 SPRR2AP35326 72 aa-0.41□□□□□ -2.48
CHD1-203ENST00000505657 FAT1Q14517 4588 aa-0.41□□□□□ -2.48
CHD1-203ENST00000505657 DNAH6Q9C0G6 4158 aa-0.42□□□□□ -2.48
CHD1-203ENST00000505657 FAT3Q8TDW7 4589 aa-0.42□□□□□ -2.48
CHD1-203ENST00000505657 NDUFB1O75438 58 aa-0.42□□□□□ -2.48
CHD1-203ENST00000505657 ACYP1P07311 99 aa-0.42□□□□□ -2.48
CHD1-203ENST00000505657 GNG2P59768 71 aa-0.42□□□□□ -2.48
CHD1-203ENST00000505657 UACAQ9BZF9 1416 aa-0.42□□□□□ -2.48
CHD1-203ENST00000505657 EPG5Q9HCE0 2579 aa-0.42□□□□□ -2.48
CHD1-203ENST00000505657 DSPP15924 2871 aaKnown RBP-0.42□□□□□ -2.48
CHD1-203ENST00000505657 MAGI3Q5TCQ9 1506 aa-0.43□□□□□ -2.48
CHD1-203ENST00000505657 AKAP9Q99996 3911 aa-0.43□□□□□ -2.48
CHD1-203ENST00000505657 RICTORQ6R327 1708 aa-0.44□□□□□ -2.48
CHD1-203ENST00000505657 DIP2BQ9P265 1576 aa-0.44□□□□□ -2.48
CHD1-203ENST00000505657 KANTRA0A1W2PQU2 76 aa-0.44□□□□□ -2.48
CHD1-203ENST00000505657 HTTP42858 3142 aa-0.44□□□□□ -2.48
CHD1-203ENST00000505657 SONP18583 2426 aaKnown RBP-0.44□□□□□ -2.48
CHD1-203ENST00000505657 DNAH9Q9NYC9 4486 aa-0.44□□□□□ -2.48
CHD1-203ENST00000505657 HIVEP1P15822 2718 aa-0.44□□□□□ -2.48
CHD1-203ENST00000505657 RB1CC1Q8TDY2 1594 aa-0.45□□□□□ -2.48
CHD1-203ENST00000505657 DNAH3Q8TD57 4116 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 227.3 ms