RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 Q6ZR54 194 aa12.18□□□□□ -0.46
ARHGEF28-205ENST00000503341 MRPL55Q7Z7F7 128 aaKnown RBP12.18□□□□□ -0.46
ARHGEF28-205ENST00000503341 C9orf163Q8N9P6 203 aa12.17□□□□□ -0.46
ARHGEF28-205ENST00000503341 IGKV2-24A0A0C4DH68 120 aa12.16□□□□□ -0.46
ARHGEF28-205ENST00000503341 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF28-205ENST00000503341 C14orf132Q9NPU4 83 aa12.16□□□□□ -0.46
ARHGEF28-205ENST00000503341 PRYO14603 147 aa12.15□□□□□ -0.46
ARHGEF28-205ENST00000503341 XGP55808 180 aa12.15□□□□□ -0.46
ARHGEF28-205ENST00000503341 JMJD7-PLA2G4BH0Y9G9 81 aa12.14□□□□□ -0.47
ARHGEF28-205ENST00000503341 ACYP1P07311 99 aa12.14□□□□□ -0.47
ARHGEF28-205ENST00000503341 SPRR1AP35321 89 aa12.14□□□□□ -0.47
ARHGEF28-205ENST00000503341 A0A1W2PNN7 141 aa12.13□□□□□ -0.47
ARHGEF28-205ENST00000503341 KRTAP4-16G5E9R7 235 aaPredicted RBP12.13□□□□□ -0.47
ARHGEF28-205ENST00000503341 H3BQ85 93 aa12.13□□□□□ -0.47
ARHGEF28-205ENST00000503341 FBN3Q75N90 2809 aa12.13□□□□□ -0.47
ARHGEF28-205ENST00000503341 WWC2-AS2Q96NR7 200 aa12.12□□□□□ -0.47
ARHGEF28-205ENST00000503341 A0A1B0GV72 72 aa12.11□□□□□ -0.47
ARHGEF28-205ENST00000503341 MT-ATP8P03928 68 aa12.11□□□□□ -0.47
ARHGEF28-205ENST00000503341 GAGE2AQ6NT46 116 aa12.11□□□□□ -0.47
ARHGEF28-205ENST00000503341 A0A087WTM6 91 aa12.1□□□□□ -0.47
ARHGEF28-205ENST00000503341 SDIM1Q6ZPB5 146 aa12.1□□□□□ -0.47
ARHGEF28-205ENST00000503341 PKIGQ9Y2B9 76 aa12.1□□□□□ -0.47
ARHGEF28-205ENST00000503341 B5MCH6 92 aa12.09□□□□□ -0.47
ARHGEF28-205ENST00000503341 CHTF8P0CG12 524 aa12.09□□□□□ -0.47
ARHGEF28-205ENST00000503341 GHRHP01286 108 aa12.09□□□□□ -0.47
ARHGEF28-205ENST00000503341 Q6ZRX8 168 aa12.09□□□□□ -0.47
ARHGEF28-205ENST00000503341 SVIPQ8NHG7 77 aa12.09□□□□□ -0.47
ARHGEF28-205ENST00000503341 ETDCA0A1B0GVM5 59 aa12.07□□□□□ -0.48
ARHGEF28-205ENST00000503341 LY6G6CO95867 125 aa12.07□□□□□ -0.48
ARHGEF28-205ENST00000503341 LAMTOR3Q9UHA4 124 aa12.07□□□□□ -0.48
ARHGEF28-205ENST00000503341 REG3GQ6UW15 175 aa12.05□□□□□ -0.48
ARHGEF28-205ENST00000503341 DHRS4-AS1Q9P1J3 65 aa12.05□□□□□ -0.48
ARHGEF28-205ENST00000503341 Q9BRP9 147 aa12.05□□□□□ -0.48
ARHGEF28-205ENST00000503341 CCKP06307 115 aa12.04□□□□□ -0.48
ARHGEF28-205ENST00000503341 RBM3P98179 157 aaKnown RBP12.04□□□□□ -0.48
ARHGEF28-205ENST00000503341 C1orf134Q5TEV5 83 aa12.04□□□□□ -0.48
ARHGEF28-205ENST00000503341 LINC00476Q8WZB0 136 aa12.03□□□□□ -0.48
ARHGEF28-205ENST00000503341 LINC00474Q9P2X8 69 aa12.03□□□□□ -0.48
ARHGEF28-205ENST00000503341 SMCR5Q8TEV8 140 aa12.02□□□□□ -0.49
ARHGEF28-205ENST00000503341 PANO1I0J062 215 aa12.01□□□□□ -0.49
ARHGEF28-205ENST00000503341 SCGB1A1P11684 91 aa12□□□□□ -0.49
ARHGEF28-205ENST00000503341 NDUFV3P56181 108 aaKnown RBP12□□□□□ -0.49
ARHGEF28-205ENST00000503341 PHF5AQ7RTV0 110 aaKnown RBP12□□□□□ -0.49
ARHGEF28-205ENST00000503341 LOC110117498A0A087WWA1 95 aa11.99□□□□□ -0.49
ARHGEF28-205ENST00000503341 Q6ZQT0 140 aa11.98□□□□□ -0.49
ARHGEF28-205ENST00000503341 LINC01547P58512 204 aaPredicted RBP11.98□□□□□ -0.49
ARHGEF28-205ENST00000503341 Q8N377 158 aa11.98□□□□□ -0.49
ARHGEF28-205ENST00000503341 RTL8CO15255 209 aa11.97□□□□□ -0.49
ARHGEF28-205ENST00000503341 LINC00643Q86TS7 51 aa11.97□□□□□ -0.49
ARHGEF28-205ENST00000503341 KRTAP11-1Q8IUC1 163 aa11.97□□□□□ -0.49
ARHGEF28-205ENST00000503341 DSCR8Q96T75 97 aa11.97□□□□□ -0.49
ARHGEF28-205ENST00000503341 LINC00846Q9NV44 126 aa11.97□□□□□ -0.49
ARHGEF28-205ENST00000503341 C3orf84H3BNL1 204 aa11.96□□□□□ -0.49
ARHGEF28-205ENST00000503341 FUSP35637 526 aaKnown RBP eCLIP11.96□□□□□ -0.49
ARHGEF28-205ENST00000503341 UBE2BP63146 152 aa11.96□□□□□ -0.49
ARHGEF28-205ENST00000503341 DEFB105AQ8NG35 78 aa11.96□□□□□ -0.49
ARHGEF28-205ENST00000503341 SPACA4Q8TDM5 124 aa11.96□□□□□ -0.49
ARHGEF28-205ENST00000503341 ERC2-IT1O76042 136 aa11.96□□□□□ -0.5
ARHGEF28-205ENST00000503341 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.96□□□□□ -0.5
ARHGEF28-205ENST00000503341 KMT2AQ03164 3969 aa11.94□□□□□ -0.5
ARHGEF28-205ENST00000503341 TRBV7-4A0A0J9YYF1 115 aa11.94□□□□□ -0.5
ARHGEF28-205ENST00000503341 PDE6GP18545 87 aa11.94□□□□□ -0.5
ARHGEF28-205ENST00000503341 FAM19A1Q7Z5A9 133 aa11.94□□□□□ -0.5
ARHGEF28-205ENST00000503341 DPH3Q96FX2 82 aa11.94□□□□□ -0.5
ARHGEF28-205ENST00000503341 EPM2AB3EWF7 344 aa11.94□□□□□ -0.5
ARHGEF28-205ENST00000503341 ST20-AS1Q8NBB2 130 aa11.94□□□□□ -0.5
ARHGEF28-205ENST00000503341 IGLV5-48A0A075B6I7 105 aa11.92□□□□□ -0.5
ARHGEF28-205ENST00000503341 PRLHP81277 87 aa11.91□□□□□ -0.5
ARHGEF28-205ENST00000503341 DNAH2Q9P225 4427 aa11.9□□□□□ -0.5
ARHGEF28-205ENST00000503341 Q6Q795 121 aa11.9□□□□□ -0.5
ARHGEF28-205ENST00000503341 TNP2Q05952 138 aa11.9□□□□□ -0.51
ARHGEF28-205ENST00000503341 TGP01266 2768 aa11.89□□□□□ -0.51
ARHGEF28-205ENST00000503341 IGLV5-52A0A0A0MRZ9 124 aa11.89□□□□□ -0.51
ARHGEF28-205ENST00000503341 TRBV7-7A0A0K0K1E9 115 aa11.89□□□□□ -0.51
ARHGEF28-205ENST00000503341 H0Y9J4 135 aa11.86□□□□□ -0.51
ARHGEF28-205ENST00000503341 C3orf22Q8N5N4 141 aa11.86□□□□□ -0.51
ARHGEF28-205ENST00000503341 DNAH17Q9UFH2 4485 aa11.85□□□□□ -0.51
ARHGEF28-205ENST00000503341 DNAH6Q9C0G6 4158 aa11.85□□□□□ -0.51
ARHGEF28-205ENST00000503341 HIGD2AQ9BW72 106 aa11.85□□□□□ -0.51
ARHGEF28-205ENST00000503341 IMUPQ9GZP8 106 aa11.84□□□□□ -0.51
ARHGEF28-205ENST00000503341 Q6JHZ5 121 aa11.84□□□□□ -0.51
ARHGEF28-205ENST00000503341 ALMS1Q8TCU4 4167 aa11.82□□□□□ -0.52
ARHGEF28-205ENST00000503341 PLAC8Q9NZF1 115 aa11.82□□□□□ -0.52
ARHGEF28-205ENST00000503341 BCE1O60756 84 aa11.82□□□□□ -0.52
ARHGEF28-205ENST00000503341 SMIM29Q86T20 159 aa11.81□□□□□ -0.52
ARHGEF28-205ENST00000503341 UBL5Q9BZL1 73 aa11.81□□□□□ -0.52
ARHGEF28-205ENST00000503341 UBE2AP49459 152 aa11.8□□□□□ -0.52
ARHGEF28-205ENST00000503341 IGKV3D-7A0A0C4DH55 119 aa11.79□□□□□ -0.52
ARHGEF28-205ENST00000503341 KRTAP13-1Q8IUC0 172 aa11.78□□□□□ -0.52
ARHGEF28-205ENST00000503341 KRTAP10-2P60368 255 aa11.77□□□□□ -0.53
ARHGEF28-205ENST00000503341 Q6ZVQ6 151 aa11.75□□□□□ -0.53
ARHGEF28-205ENST00000503341 C1orf137Q5JT78 98 aa11.74□□□□□ -0.53
ARHGEF28-205ENST00000503341 ATP5EP2Q5VTU8 51 aa11.74□□□□□ -0.53
ARHGEF28-205ENST00000503341 SPRR1BP22528 89 aa11.73□□□□□ -0.53
ARHGEF28-205ENST00000503341 HECTD4Q9Y4D8 3996 aa11.72□□□□□ -0.53
ARHGEF28-205ENST00000503341 A0A1W2PNM2 257 aa11.71□□□□□ -0.53
ARHGEF28-205ENST00000503341 F8WEM9 126 aa11.71□□□□□ -0.53
ARHGEF28-205ENST00000503341 PSORS1C2Q9UIG4 136 aa11.71□□□□□ -0.53
ARHGEF28-205ENST00000503341 HYDINQ4G0P3 5121 aa11.7□□□□□ -0.54
ARHGEF28-205ENST00000503341 IGLV8-61A0A075B6I0 122 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms