RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CBLN1P23435 193 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 PMCHL1Q16048 86 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 SOSTDC1Q6X4U4 206 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 TMEM167AQ8TBQ9 72 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 S100A16Q96FQ6 103 aaKnown RBP2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 TMEM242Q9NWH2 141 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 DNAH11Q96DT5 4516 aa2.09□□□□□ -2.07
HMGB1P3-201ENST00000502802 TRBV7-7A0A0K0K1E9 115 aa2.09□□□□□ -2.07
HMGB1P3-201ENST00000502802 MT-ATP8P03928 68 aa2.09□□□□□ -2.07
HMGB1P3-201ENST00000502802 SLC25A5P05141 298 aaKnown RBP2.09□□□□□ -2.07
HMGB1P3-201ENST00000502802 SLC25A6P12236 298 aa2.09□□□□□ -2.07
HMGB1P3-201ENST00000502802 TDRG1Q3Y452 100 aa2.09□□□□□ -2.07
HMGB1P3-201ENST00000502802 DYNLRB2Q8TF09 96 aa2.09□□□□□ -2.07
HMGB1P3-201ENST00000502802 TRBV7-1A0A0A6YYK4 115 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 ATOX1O00244 68 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 TIMM17BO60830 172 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 PPYP01298 95 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 IL5P05113 134 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 SNRPD3P62318 126 aaKnown RBP2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 ZNF818PQ6ZRF7 136 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 TSKUQ8WUA8 353 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 PPDPFLQ8WWR9 84 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 DIRC1Q969H9 104 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 MGST2Q99735 147 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 LINC00467Q9BRT7 94 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 KIAA1109Q2LD37 5005 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 UBE2L5PA0A1B0GUS4 154 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 KANTRA0A1W2PQU2 76 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 K7EIM0 57 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 LY6G6CO95867 125 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 CD3DP04234 171 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 CXCL1P09341 107 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 TPT1P13693 172 aaKnown RBP2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 FXYD4P59646 89 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 KRTDAPP60985 99 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 UBE2L3P68036 154 aaKnown RBP2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 WT1-ASQ06250 92 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 DEFB135Q30KP9 77 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 PSMG4Q5JS54 123 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 MIC13Q5XKP0 118 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 OR10AG1Q8NH19 301 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 NPCDR1Q9BY65 106 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 KRTAP4-3Q9BYR4 195 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 C14orf132Q9NPU4 83 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 NDUFA4L2Q9NRX3 87 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 SPCS1Q9Y6A9 102 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 A0A1W2PPM0 123 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 C7orf77A4D0Y5 90 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 NUPR2A6NF83 97 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 C17orf112F2Z3M2 114 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 I3L2K1 104 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 NDUFA4O00483 81 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 ADCYAP1P18509 176 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 PDE6HQ13956 83 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 BVES-AS1Q5T3Y7 98 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 ATP11AUNQ6ZP68 121 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 C5orf38Q86SI9 138 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 OR2T35Q8NGX2 323 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 FXYD6Q9H0Q3 95 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 TMEM14BQ9NUH8 114 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 LY96Q9Y6Y9 160 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 HSPG2P98160 4391 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 IGKV3-7A0A075B6H7 116 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 TRAV12-1A0A0B4J245 112 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 DEFB4AO15263 64 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 NDUFC1O43677 76 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 C18orf32Q8TCD1 76 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 LSM10Q969L4 123 aaKnown RBP2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 LINC01600Q96MT4 127 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 RHPN1-AS1Q9BWJ2 59 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 DPH3P1Q9H4G8 78 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 MRPL36Q9P0J6 103 aaKnown RBP2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 LRP1BQ9NZR2 4599 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 RBAKDNA6NC62 111 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 SYS1-DBNDD2H3BUS1 97 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 LYRM1O43325 122 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 BCE1O60756 84 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 IGKCP01834 107 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 APOBP04114 4563 aaKnown RBP2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 ACYP1P07311 99 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 RNASE3P12724 160 aaKnown RBP2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 DEFB131AP59861 70 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 PRCDQ00LT1 54 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 SPATA45Q537H7 98 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 SPINK9Q5DT21 86 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 TRGV9Q99603 122 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 APLNQ9ULZ1 77 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 PCLOQ9Y6V0 5065 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 DNAH5Q8TE73 4624 aa2.03□□□□□ -2.08
HMGB1P3-201ENST00000502802 TRAV2A0A0B4J234 112 aa2.03□□□□□ -2.08
HMGB1P3-201ENST00000502802 SFTA3P0C7M3 94 aa2.03□□□□□ -2.08
HMGB1P3-201ENST00000502802 ZC2HC1AQ96GY0 325 aa2.03□□□□□ -2.08
HMGB1P3-201ENST00000502802 C20orf78Q9BR46 151 aa2.03□□□□□ -2.08
HMGB1P3-201ENST00000502802 TRAV10A0A0B4J240 114 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 NAP1L6A6NFF2 107 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 K7ERJ3 54 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 SIX6O95475 246 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 CKS2P33552 79 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 DEFB1P60022 68 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms