RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ALMS1Q8TCU4 4167 aa2.54□□□□□ -2
HMGB1P21-201ENST00000502313 D6R8Y8 96 aa2.54□□□□□ -2
HMGB1P21-201ENST00000502313 I3L3M4 83 aa2.54□□□□□ -2
HMGB1P21-201ENST00000502313 CRPP02741 224 aa2.54□□□□□ -2
HMGB1P21-201ENST00000502313 SPINK8P0C7L1 97 aa2.54□□□□□ -2
HMGB1P21-201ENST00000502313 IFI27P40305 119 aaPredicted RBP2.54□□□□□ -2
HMGB1P21-201ENST00000502313 SEC11AP67812 179 aa2.54□□□□□ -2
HMGB1P21-201ENST00000502313 C10orf99Q6UWK7 81 aa2.54□□□□□ -2
HMGB1P21-201ENST00000502313 SH2D6Q7Z4S9 175 aa2.54□□□□□ -2
HMGB1P21-201ENST00000502313 VAMP8Q9BV40 100 aa2.54□□□□□ -2
HMGB1P21-201ENST00000502313 R4GN34 69 aa2.54□□□□□ -2
HMGB1P21-201ENST00000502313 DNAH11Q96DT5 4516 aa2.53□□□□□ -2
HMGB1P21-201ENST00000502313 DNAH17Q9UFH2 4485 aa2.53□□□□□ -2
HMGB1P21-201ENST00000502313 TRGV2A0A075B6R0 118 aa2.53□□□□□ -2
HMGB1P21-201ENST00000502313 LOC107984156A0A0G2JMH3 177 aa2.53□□□□□ -2
HMGB1P21-201ENST00000502313 TRBV10-1A0A0K0K1A3 114 aa2.53□□□□□ -2
HMGB1P21-201ENST00000502313 A8MTW9 85 aa2.53□□□□□ -2
HMGB1P21-201ENST00000502313 SPINK13Q1W4C9 94 aa2.53□□□□□ -2
HMGB1P21-201ENST00000502313 SPINT4Q6UDR6 99 aa2.53□□□□□ -2
HMGB1P21-201ENST00000502313 ARL17AQ8IVW1 177 aa2.53□□□□□ -2
HMGB1P21-201ENST00000502313 Q8TAT8 98 aa2.53□□□□□ -2
HMGB1P21-201ENST00000502313 C20orf166-AS1Q96NR2 134 aa2.53□□□□□ -2
HMGB1P21-201ENST00000502313 KLK12Q9UKR0 248 aa2.53□□□□□ -2
HMGB1P21-201ENST00000502313 SERP1Q9Y6X1 66 aa2.53□□□□□ -2
HMGB1P21-201ENST00000502313 HECTD4Q9Y4D8 3996 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 TRBV6-5A0A0K0K1A5 114 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 LINC01546A6NGU7 62 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 A8MU10 97 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 SYS1-DBNDD2H3BUS1 97 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 H3BVH4 76 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 MGPP08493 103 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 IFITM1P13164 125 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 PLNP26678 52 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 KRTAP10-7P60409 375 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 DEFB136Q30KP8 78 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 LINC01545Q5VT33 79 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 FAM19A2Q8N3H0 131 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 TMEM263Q8WUH6 116 aaKnown RBP2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 COPS9Q8WXC6 57 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 RAB37Q96AX2 223 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 IFI27L1Q96BM0 104 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 UQCR10Q9UDW1 63 aa2.52□□□□□ -2.01
HMGB1P21-201ENST00000502313 TRBV7-3A0A075B6L6 115 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 IGHV3-64A0A075B6Q5 118 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 TRAV12-1A0A0B4J245 112 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 TRGV4A0A0C4DH28 118 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 IGHV1-24A0A0C4DH33 117 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 MUC21A0A0G2JKD1 596 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 MUC21A0A140T8X8 626 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 C3orf79P0CE67 100 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 SPART-AS1P0CW21 52 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 RNASE3P12724 160 aaKnown RBP2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 RHOHQ15669 191 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 ZNF56Q15929 161 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 PYY3Q5JQD4 70 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 FAM74A4Q5TZK3 123 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 GDF5OSQ5U4N7 250 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 HIGD2AQ9BW72 106 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 ANAPC11Q9NYG5 84 aa2.51□□□□□ -2.01
HMGB1P21-201ENST00000502313 DYNC1H1Q14204 4646 aaKnown RBP2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 IGLV2-18A0A075B6J9 118 aa2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 TRGV1A0A0A0MS02 117 aa2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 TRBV6-4A0A1B0GX49 114 aa2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 SDHAF1A6NFY7 115 aa2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 H3BRM9 83 aa2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 M0QY20 66 aa2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 NUPR1O60356 82 aa2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 IGKCP01834 107 aa2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 MIFP14174 115 aa2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 POLR2KP53803 58 aaKnown RBP2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 KRTAP10-6P60371 365 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 SPATA45Q537H7 98 aa2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 LINC00526Q96FQ7 95 aa2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 SMIM2Q9BVW6 85 aa2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 C14orf132Q9NPU4 83 aa2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 PKHD1P08F94 4074 aa2.5□□□□□ -2.01
HMGB1P21-201ENST00000502313 SORL1Q92673 2214 aa2.49□□□□□ -2.01
HMGB1P21-201ENST00000502313 PSCAO43653 123 aa2.49□□□□□ -2.01
HMGB1P21-201ENST00000502313 HINT1P49773 126 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P21-201ENST00000502313 CFAP126Q5VTH2 177 aa2.49□□□□□ -2.01
HMGB1P21-201ENST00000502313 SFTA2Q6UW10 78 aa2.49□□□□□ -2.01
HMGB1P21-201ENST00000502313 FP248Q71RG6 208 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P21-201ENST00000502313 Q8N9L7 120 aa2.49□□□□□ -2.01
HMGB1P21-201ENST00000502313 NOP10Q9NPE3 64 aaKnown RBP2.49□□□□□ -2.01
HMGB1P21-201ENST00000502313 PRO0255Q9UI72 69 aa2.49□□□□□ -2.01
HMGB1P21-201ENST00000502313 PKD1P98161 4303 aa2.49□□□□□ -2.01
HMGB1P21-201ENST00000502313 BIRC6Q9NR09 4857 aa2.49□□□□□ -2.01
HMGB1P21-201ENST00000502313 TRBV25-1A0A075B6N4 114 aa2.48□□□□□ -2.01
HMGB1P21-201ENST00000502313 TMEM262E9PQX1 116 aa2.48□□□□□ -2.01
HMGB1P21-201ENST00000502313 F8VRH5 84 aa2.48□□□□□ -2.01
HMGB1P21-201ENST00000502313 K7EIL1 84 aa2.48□□□□□ -2.01
HMGB1P21-201ENST00000502313 SNCGO76070 127 aa2.48□□□□□ -2.01
HMGB1P21-201ENST00000502313 HRES1P13985 223 aa2.48□□□□□ -2.01
HMGB1P21-201ENST00000502313 DEFB121Q5J5C9 76 aa2.48□□□□□ -2.01
HMGB1P21-201ENST00000502313 ATP11AUNQ6ZP68 121 aa2.48□□□□□ -2.01
HMGB1P21-201ENST00000502313 LINC00269Q8N2A0 174 aa2.48□□□□□ -2.01
HMGB1P21-201ENST00000502313 ATP6V0E2Q8NHE4 81 aa2.48□□□□□ -2.01
HMGB1P21-201ENST00000502313 DSCR8Q96T75 97 aa2.48□□□□□ -2.01
HMGB1P21-201ENST00000502313 TIMM21Q9BVV7 248 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms