RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 TRBV6-5A0A0K0K1A5 114 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 TEX49A0A1B0GTD5 131 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 JMJD7-PLA2G4BH0Y9G9 81 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 H7BZZ5 65 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 SFT2D2O95562 160 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 PPYP01298 95 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 GNG11P61952 73 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 SEC11AP67812 179 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 MPV17LQ2QL34 196 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 FAM74A1Q5RGS3 127 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 RPL7L1Q6DKI1 246 aaKnown RBP0.88□□□□□ -2.27
UBR4-217ENST00000497018 SERP2Q8N6R1 65 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 ZNF625Q96I27 306 aaPredicted RBP0.88□□□□□ -2.27
UBR4-217ENST00000497018 PMCHL2Q9BQD1 86 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 DYNLRB1Q9NP97 96 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 DNAH10Q8IVF4 4471 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 LRP2P98164 4655 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 SORL1Q92673 2214 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 TRBV7-3A0A075B6L6 115 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 TRAV22A0A0B4J277 110 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 IGKV3D-7A0A0C4DH55 119 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 IGKV3OR2-268A0A0C4DH90 116 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 LOC101927531A0A1B0GV80 90 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 HIGD1CA8MV81 97 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 ATOX1O00244 68 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 GYPAP02724 150 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 LYNX1P0DP58 116 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 UBE2D3P61077 147 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 UBE2D2P62837 147 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 KRTAP13-3Q3SY46 172 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 BRD3OSQ6XYD6 125 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 LINC00322Q6ZN03 302 aaPredicted RBP0.87□□□□□ -2.27
UBR4-217ENST00000497018 FAM167A-AS1Q96KT0 104 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 TRGV9Q99603 122 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 KRTAP2-1Q9BYU5 128 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 MED9Q9NWA0 146 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 CACFD1Q9UGQ2 172 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 KLK9Q9UKQ9 250 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 TNCP24821 2201 aa0.87□□□□□ -2.27
UBR4-217ENST00000497018 DYNC1H1Q14204 4646 aaKnown RBP0.86□□□□□ -2.27
UBR4-217ENST00000497018 TRAV23DV6A0A075B6W5 121 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 A0A087WTM6 91 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 IGLC7A0M8Q6 106 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 NAP1L6A6NFF2 107 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 J3QRE1 110 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 CCL3L1P16619 93 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 FAUP35544 74 aaKnown RBP0.86□□□□□ -2.27
UBR4-217ENST00000497018 FXYD4P59646 89 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 KRTAP10-10P60014 251 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 KRTAP10-7P60409 375 aaPredicted RBP0.86□□□□□ -2.27
UBR4-217ENST00000497018 KRTDAPP60985 99 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 HAMPP81172 84 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 ZNF56Q15929 161 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 PCOTHQ58A44 107 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 C10orf128Q5T292 105 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 UBE2DNLQ8IWF7 75 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 C20orf197Q8N268 126 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 DEFB108BQ8NET1 73 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 WFDC10AQ9H1F0 79 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 CDC42SE2Q9NRR3 84 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 HIGD1BQ9P298 99 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 DNAH6Q9C0G6 4158 aa0.86□□□□□ -2.27
UBR4-217ENST00000497018 HEATR1Q9H583 2144 aaKnown RBP0.86□□□□□ -2.27
UBR4-217ENST00000497018 SYNE2Q8WXH0 6885 aaKnown RBP0.86□□□□□ -2.27
UBR4-217ENST00000497018 MACF1Q9UPN3 7388 aaKnown RBP0.85□□□□□ -2.27
UBR4-217ENST00000497018 DNAH11Q96DT5 4516 aa0.85□□□□□ -2.27
UBR4-217ENST00000497018 IGLV3-32A0A0A0MS00 114 aa0.85□□□□□ -2.27
UBR4-217ENST00000497018 APOC3P02656 99 aa0.85□□□□□ -2.27
UBR4-217ENST00000497018 TRAPPC2P0DI81 140 aa0.85□□□□□ -2.27
UBR4-217ENST00000497018 TRAPPC2BP0DI82 140 aa0.85□□□□□ -2.27
UBR4-217ENST00000497018 ELOF1P60002 83 aaKnown RBP0.85□□□□□ -2.27
UBR4-217ENST00000497018 FXYD3Q14802 87 aa0.85□□□□□ -2.27
UBR4-217ENST00000497018 ALKAL2Q6UX46 152 aa0.85□□□□□ -2.27
UBR4-217ENST00000497018 VMO1Q7Z5L0 202 aa0.85□□□□□ -2.27
UBR4-217ENST00000497018 C5orf56Q8N8D9 126 aa0.85□□□□□ -2.27
UBR4-217ENST00000497018 S100A16Q96FQ6 103 aaKnown RBP0.85□□□□□ -2.27
UBR4-217ENST00000497018 LINC00208Q96KT6 92 aa0.85□□□□□ -2.27
UBR4-217ENST00000497018 LINC01600Q96MT4 127 aa0.85□□□□□ -2.27
UBR4-217ENST00000497018 NDUFA4L2Q9NRX3 87 aa0.85□□□□□ -2.27
UBR4-217ENST00000497018 TMEM14CQ9P0S9 112 aa0.85□□□□□ -2.27
UBR4-217ENST00000497018 DNAH2Q9P225 4427 aa0.85□□□□□ -2.27
UBR4-217ENST00000497018 TRBV6-7A0A0A0MS04 114 aa0.84□□□□□ -2.27
UBR4-217ENST00000497018 IGKV2-29A2NJV5 120 aaPredicted RBP0.84□□□□□ -2.27
UBR4-217ENST00000497018 TMEM14DPA8MWL7 114 aa0.84□□□□□ -2.27
UBR4-217ENST00000497018 H3BSH0 61 aa0.84□□□□□ -2.27
UBR4-217ENST00000497018 SYS1-DBNDD2H3BUS1 97 aa0.84□□□□□ -2.27
UBR4-217ENST00000497018 NDUFC1O43677 76 aa0.84□□□□□ -2.27
UBR4-217ENST00000497018 CYB5AP00167 134 aa0.84□□□□□ -2.27
UBR4-217ENST00000497018 RPL37AP61513 92 aaKnown RBP0.84□□□□□ -2.27
UBR4-217ENST00000497018 SSBP1Q04837 148 aaKnown RBP0.84□□□□□ -2.27
UBR4-217ENST00000497018 PEA15Q15121 130 aa0.84□□□□□ -2.27
UBR4-217ENST00000497018 SPATA45Q537H7 98 aa0.84□□□□□ -2.27
UBR4-217ENST00000497018 XAF1Q6GPH4 301 aa0.84□□□□□ -2.27
UBR4-217ENST00000497018 CYP2G1PQ6ZSU1 146 aa0.84□□□□□ -2.27
UBR4-217ENST00000497018 Q8N6K4 173 aa0.84□□□□□ -2.27
UBR4-217ENST00000497018 COX7B2Q8TF08 81 aa0.84□□□□□ -2.27
UBR4-217ENST00000497018 MGST2Q99735 147 aa0.84□□□□□ -2.27
UBR4-217ENST00000497018 LCE3DQ9BYE3 92 aa0.84□□□□□ -2.27
UBR4-217ENST00000497018 RABAC1Q9UI14 185 aa0.84□□□□□ -2.27
UBR4-217ENST00000497018 APLNQ9ULZ1 77 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms