RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 RB1CC1Q8TDY2 1594 aa-0.12□□□□□ -2.43
CLTC-208ENST00000496076 USP32Q8NFA0 1604 aa-0.13□□□□□ -2.43
CLTC-208ENST00000496076 FLNAP21333 2647 aaKnown RBP-0.13□□□□□ -2.43
CLTC-208ENST00000496076 DCHS2Q6V1P9 2916 aa-0.13□□□□□ -2.43
CLTC-208ENST00000496076 NCOA2Q15596 1464 aa-0.13□□□□□ -2.43
CLTC-208ENST00000496076 SPRR2BP35325 72 aa-0.13□□□□□ -2.43
CLTC-208ENST00000496076 LRP2P98164 4655 aa-0.13□□□□□ -2.43
CLTC-208ENST00000496076 NDUFB1O75438 58 aa-0.14□□□□□ -2.43
CLTC-208ENST00000496076 ADIRFQ15847 76 aa-0.14□□□□□ -2.43
CLTC-208ENST00000496076 POLR1AO95602 1720 aaPredicted RBP-0.14□□□□□ -2.43
CLTC-208ENST00000496076 SETXQ7Z333 2677 aaKnown RBP-0.15□□□□□ -2.43
CLTC-208ENST00000496076 APC2O95996 2303 aa-0.15□□□□□ -2.43
CLTC-208ENST00000496076 S100A13Q99584 98 aa-0.15□□□□□ -2.43
CLTC-208ENST00000496076 ST20Q9HBF5 79 aa-0.15□□□□□ -2.43
CLTC-208ENST00000496076 URB2Q14146 1524 aaKnown RBP-0.15□□□□□ -2.43
CLTC-208ENST00000496076 LTN1O94822 1766 aa-0.15□□□□□ -2.43
CLTC-208ENST00000496076 ZNF831Q5JPB2 1677 aa-0.15□□□□□ -2.43
CLTC-208ENST00000496076 KRTAP6-1Q3LI64 71 aa-0.16□□□□□ -2.44
CLTC-208ENST00000496076 STAB1Q9NY15 2570 aa-0.16□□□□□ -2.44
CLTC-208ENST00000496076 MED14O60244 1454 aa-0.16□□□□□ -2.44
CLTC-208ENST00000496076 CCDC18Q5T9S5 1454 aa-0.16□□□□□ -2.44
CLTC-208ENST00000496076 COX6B2Q6YFQ2 88 aa-0.17□□□□□ -2.44
CLTC-208ENST00000496076 RGPD8O14715 1765 aaPredicted RBP-0.17□□□□□ -2.44
CLTC-208ENST00000496076 RGPD5Q99666 1765 aa-0.17□□□□□ -2.44
CLTC-208ENST00000496076 HECTD4Q9Y4D8 3996 aa-0.17□□□□□ -2.44
CLTC-208ENST00000496076 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.18□□□□□ -2.44
CLTC-208ENST00000496076 CREBBPQ92793 2442 aa-0.18□□□□□ -2.44
CLTC-208ENST00000496076 DOT1LQ8TEK3 1739 aa-0.18□□□□□ -2.44
CLTC-208ENST00000496076 PRKDCP78527 4128 aaKnown RBP-0.19□□□□□ -2.44
CLTC-208ENST00000496076 UMAD1C9J7I0 102 aa-0.19□□□□□ -2.44
CLTC-208ENST00000496076 H3BUT2 72 aa-0.19□□□□□ -2.44
CLTC-208ENST00000496076 IFI6P09912 130 aa-0.19□□□□□ -2.44
CLTC-208ENST00000496076 LRP1BQ9NZR2 4599 aa-0.19□□□□□ -2.44
CLTC-208ENST00000496076 PIK3C2BO00750 1634 aa-0.2□□□□□ -2.44
CLTC-208ENST00000496076 FLNBO75369 2602 aaKnown RBP-0.2□□□□□ -2.44
CLTC-208ENST00000496076 C4AP0C0L4 1744 aa-0.2□□□□□ -2.44
CLTC-208ENST00000496076 C4BP0C0L5 1744 aa-0.2□□□□□ -2.44
CLTC-208ENST00000496076 A0A087WXM4 84 aa-0.2□□□□□ -2.44
CLTC-208ENST00000496076 IFI27P40305 119 aaPredicted RBP-0.2□□□□□ -2.44
CLTC-208ENST00000496076 DIP2BQ9P265 1576 aa-0.2□□□□□ -2.44
CLTC-208ENST00000496076 TIAM2Q8IVF5 1701 aa-0.21□□□□□ -2.44
CLTC-208ENST00000496076 NWD1Q149M9 1564 aa-0.21□□□□□ -2.44
CLTC-208ENST00000496076 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.21□□□□□ -2.44
CLTC-208ENST00000496076 DOPEY1Q5JWR5 2465 aa-0.21□□□□□ -2.44
CLTC-208ENST00000496076 REV3LO60673 3130 aa-0.21□□□□□ -2.44
CLTC-208ENST00000496076 DSTQ03001 7570 aaKnown RBP-0.21□□□□□ -2.44
CLTC-208ENST00000496076 ZANQ9Y493 2812 aa-0.22□□□□□ -2.44
CLTC-208ENST00000496076 ACANP16112 2415 aa-0.22□□□□□ -2.44
CLTC-208ENST00000496076 COL6A3P12111 3177 aa-0.22□□□□□ -2.44
CLTC-208ENST00000496076 ERVK-7P63135 1459 aa-0.22□□□□□ -2.45
CLTC-208ENST00000496076 KNL1Q8NG31 2342 aa-0.22□□□□□ -2.45
CLTC-208ENST00000496076 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.23□□□□□ -2.45
CLTC-208ENST00000496076 CICQ96RK0 1608 aaPredicted RBP-0.23□□□□□ -2.45
CLTC-208ENST00000496076 H0YGG7 62 aa-0.23□□□□□ -2.45
CLTC-208ENST00000496076 ATP5EP2Q5VTU8 51 aa-0.23□□□□□ -2.45
CLTC-208ENST00000496076 DCAF1Q9Y4B6 1507 aa-0.23□□□□□ -2.45
CLTC-208ENST00000496076 NESP48681 1621 aa-0.24□□□□□ -2.45
CLTC-208ENST00000496076 CNOT1A5YKK6 2376 aaKnown RBP-0.24□□□□□ -2.45
CLTC-208ENST00000496076 STAB2Q8WWQ8 2551 aa-0.24□□□□□ -2.45
CLTC-208ENST00000496076 SRRM2Q9UQ35 2752 aaKnown RBP-0.24□□□□□ -2.45
CLTC-208ENST00000496076 SMIM13P0DJ93 91 aa-0.24□□□□□ -2.45
CLTC-208ENST00000496076 DEFA5Q01523 94 aa-0.24□□□□□ -2.45
CLTC-208ENST00000496076 NREPQ16612 68 aa-0.24□□□□□ -2.45
CLTC-208ENST00000496076 PRO3102Q9H379 93 aa-0.24□□□□□ -2.45
CLTC-208ENST00000496076 MAGI3Q5TCQ9 1506 aa-0.24□□□□□ -2.45
CLTC-208ENST00000496076 TENM2Q9NT68 2774 aa-0.24□□□□□ -2.45
CLTC-208ENST00000496076 ARFGEF2Q9Y6D5 1785 aa-0.24□□□□□ -2.45
CLTC-208ENST00000496076 PCNX1Q96RV3 2341 aa-0.25□□□□□ -2.45
CLTC-208ENST00000496076 LINC00158P58513 81 aa-0.25□□□□□ -2.45
CLTC-208ENST00000496076 BVES-AS1Q5T3Y7 98 aa-0.25□□□□□ -2.45
CLTC-208ENST00000496076 NDUFA4O00483 81 aa-0.26□□□□□ -2.45
CLTC-208ENST00000496076 DEFB121Q5J5C9 76 aa-0.26□□□□□ -2.45
CLTC-208ENST00000496076 ADAMTS12P58397 1594 aa-0.27□□□□□ -2.45
CLTC-208ENST00000496076 C3orf79P0CE67 100 aa-0.27□□□□□ -2.45
CLTC-208ENST00000496076 PTPN23Q9H3S7 1636 aa-0.27□□□□□ -2.45
CLTC-208ENST00000496076 ARHGAP35Q9NRY4 1499 aa-0.28□□□□□ -2.45
CLTC-208ENST00000496076 MUC12Q9UKN1 5478 aa-0.28□□□□□ -2.45
CLTC-208ENST00000496076 KDM5DQ9BY66 1539 aa-0.29□□□□□ -2.46
CLTC-208ENST00000496076 TRANK1O15050 2925 aa-0.3□□□□□ -2.46
CLTC-208ENST00000496076 SCN11AQ9UI33 1791 aa-0.3□□□□□ -2.46
CLTC-208ENST00000496076 MUC2Q02817 5179 aa-0.3□□□□□ -2.46
CLTC-208ENST00000496076 ABCC1P33527 1531 aa-0.31□□□□□ -2.46
CLTC-208ENST00000496076 NBEAL1Q6ZS30 2694 aa-0.31□□□□□ -2.46
CLTC-208ENST00000496076 KRTAP6-2Q3LI66 62 aa-0.31□□□□□ -2.46
CLTC-208ENST00000496076 NF1P21359 2839 aa-0.32□□□□□ -2.46
CLTC-208ENST00000496076 AKAP13Q12802 2813 aa-0.32□□□□□ -2.46
CLTC-208ENST00000496076 PLCH1Q4KWH8 1693 aa-0.32□□□□□ -2.46
CLTC-208ENST00000496076 CCDC88BA6NC98 1476 aa-0.32□□□□□ -2.46
CLTC-208ENST00000496076 LCE6AA0A183 80 aa-0.32□□□□□ -2.46
CLTC-208ENST00000496076 SETD2Q9BYW2 2564 aaPredicted RBP-0.32□□□□□ -2.46
CLTC-208ENST00000496076 MAP1AP78559 2803 aaPredicted RBP-0.32□□□□□ -2.46
CLTC-208ENST00000496076 CFAP43Q8NDM7 1665 aa-0.33□□□□□ -2.46
CLTC-208ENST00000496076 PDE4DIPQ5VU43 2346 aa-0.33□□□□□ -2.46
CLTC-208ENST00000496076 C18orf32Q8TCD1 76 aa-0.33□□□□□ -2.46
CLTC-208ENST00000496076 RICTORQ6R327 1708 aa-0.33□□□□□ -2.46
CLTC-208ENST00000496076 H0YAA0 97 aa-0.34□□□□□ -2.46
CLTC-208ENST00000496076 PLXNC1O60486 1568 aa-0.34□□□□□ -2.46
CLTC-208ENST00000496076 SPRR2AP35326 72 aa-0.34□□□□□ -2.46
CLTC-208ENST00000496076 KRTAP19-7Q3SYF9 63 aa-0.34□□□□□ -2.46
CLTC-208ENST00000496076 DDX60LQ5H9U9 1706 aaKnown RBP-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms