RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ABCA1O95477 2261 aa1.99□□□□□ -2.09
ECHDC1-217ENST00000488087 PRB3Q04118 309 aaPredicted RBP1.98□□□□□ -2.09
ECHDC1-217ENST00000488087 Q8NDZ9 215 aa1.98□□□□□ -2.09
ECHDC1-217ENST00000488087 KIAA0100Q14667 2235 aaKnown RBP1.98□□□□□ -2.09
ECHDC1-217ENST00000488087 DNAH14Q0VDD8 3507 aa1.97□□□□□ -2.09
ECHDC1-217ENST00000488087 CACNA1EQ15878 2313 aa1.97□□□□□ -2.09
ECHDC1-217ENST00000488087 XIRP2A4UGR9 3374 aa1.97□□□□□ -2.09
ECHDC1-217ENST00000488087 TRANK1O15050 2925 aa1.97□□□□□ -2.09
ECHDC1-217ENST00000488087 DEFB131BA0A096LNP1 70 aa1.97□□□□□ -2.09
ECHDC1-217ENST00000488087 A0A1W2PNM2 257 aa1.97□□□□□ -2.09
ECHDC1-217ENST00000488087 H0Y9P7 68 aa1.97□□□□□ -2.09
ECHDC1-217ENST00000488087 IGLV1-51P01701 117 aa1.97□□□□□ -2.09
ECHDC1-217ENST00000488087 SPINK7P58062 85 aa1.97□□□□□ -2.09
ECHDC1-217ENST00000488087 SPATA8Q6RVD6 105 aa1.97□□□□□ -2.09
ECHDC1-217ENST00000488087 LINC00304Q8N9R0 145 aa1.97□□□□□ -2.09
ECHDC1-217ENST00000488087 XAGE1AQ9HD64 81 aa1.97□□□□□ -2.09
ECHDC1-217ENST00000488087 CHD9Q3L8U1 2897 aa1.97□□□□□ -2.09
ECHDC1-217ENST00000488087 TNRC18O15417 2968 aaPredicted RBP1.97□□□□□ -2.09
ECHDC1-217ENST00000488087 IGKV3-7A0A075B6H7 116 aa1.96□□□□□ -2.1
ECHDC1-217ENST00000488087 K7EQZ3 153 aa1.96□□□□□ -2.1
ECHDC1-217ENST00000488087 CHD7Q9P2D1 2997 aa1.96□□□□□ -2.1
ECHDC1-217ENST00000488087 USP34Q70CQ2 3546 aa1.96□□□□□ -2.1
ECHDC1-217ENST00000488087 ZZEF1O43149 2961 aa1.95□□□□□ -2.1
ECHDC1-217ENST00000488087 NBEAQ8NFP9 2946 aa1.95□□□□□ -2.1
ECHDC1-217ENST00000488087 TRGV1A0A0A0MS02 117 aa1.95□□□□□ -2.1
ECHDC1-217ENST00000488087 IGKV2-24A0A0C4DH68 120 aa1.95□□□□□ -2.1
ECHDC1-217ENST00000488087 LYNX1G3V0Z9 82 aa1.95□□□□□ -2.1
ECHDC1-217ENST00000488087 LYNX1P0DP58 116 aa1.95□□□□□ -2.1
ECHDC1-217ENST00000488087 DEFB131AP59861 70 aa1.95□□□□□ -2.1
ECHDC1-217ENST00000488087 TP53AIP1Q9HCN2 124 aa1.95□□□□□ -2.1
ECHDC1-217ENST00000488087 SPTBN5Q9NRC6 3674 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-217ENST00000488087 DEFB112Q30KQ8 113 aa1.94□□□□□ -2.1
ECHDC1-217ENST00000488087 C1orf137Q5JT78 98 aa1.94□□□□□ -2.1
ECHDC1-217ENST00000488087 C5orf42Q9H799 3197 aa1.94□□□□□ -2.1
ECHDC1-217ENST00000488087 CFAP54Q96N23 3096 aa1.94□□□□□ -2.1
ECHDC1-217ENST00000488087 SDK1Q7Z5N4 2213 aa1.93□□□□□ -2.1
ECHDC1-217ENST00000488087 PLCE1Q9P212 2302 aa1.93□□□□□ -2.1
ECHDC1-217ENST00000488087 PTPRQQ9UMZ3 2332 aa1.93□□□□□ -2.1
ECHDC1-217ENST00000488087 H3BUX3 64 aa1.93□□□□□ -2.1
ECHDC1-217ENST00000488087 SPRR1AP35321 89 aa1.93□□□□□ -2.1
ECHDC1-217ENST00000488087 ROMO1P60602 79 aa1.93□□□□□ -2.1
ECHDC1-217ENST00000488087 SPAG11AQ6PDA7 123 aa1.93□□□□□ -2.1
ECHDC1-217ENST00000488087 ICE1Q9Y2F5 2266 aa1.93□□□□□ -2.1
ECHDC1-217ENST00000488087 ABCA4P78363 2273 aa1.92□□□□□ -2.1
ECHDC1-217ENST00000488087 B4DSR2 109 aa1.92□□□□□ -2.1
ECHDC1-217ENST00000488087 HRES1P13985 223 aa1.92□□□□□ -2.1
ECHDC1-217ENST00000488087 HTN1P15515 57 aa1.92□□□□□ -2.1
ECHDC1-217ENST00000488087 DEFB109BQ30KR1 87 aa1.92□□□□□ -2.1
ECHDC1-217ENST00000488087 UNQ6190/PRO20217Q6UXQ8 127 aa1.92□□□□□ -2.1
ECHDC1-217ENST00000488087 BRD3OSQ6XYD6 125 aa1.92□□□□□ -2.1
ECHDC1-217ENST00000488087 C6orf48Q9UBA6 75 aa1.92□□□□□ -2.1
ECHDC1-217ENST00000488087 DOPEY2Q9Y3R5 2298 aa1.92□□□□□ -2.1
ECHDC1-217ENST00000488087 FRYQ5TBA9 3013 aa1.91□□□□□ -2.1
ECHDC1-217ENST00000488087 VPS13AQ96RL7 3174 aa1.91□□□□□ -2.1
ECHDC1-217ENST00000488087 WNK2Q9Y3S1 2297 aa1.91□□□□□ -2.1
ECHDC1-217ENST00000488087 A0A087WSZ3 146 aa1.91□□□□□ -2.1
ECHDC1-217ENST00000488087 IGKV3OR2-268A0A0C4DH90 116 aa1.91□□□□□ -2.1
ECHDC1-217ENST00000488087 K7ERS5 55 aa1.91□□□□□ -2.1
ECHDC1-217ENST00000488087 PRB1P04280 392 aa1.91□□□□□ -2.1
ECHDC1-217ENST00000488087 C1orf134Q5TEV5 83 aa1.91□□□□□ -2.1
ECHDC1-217ENST00000488087 CSAG1Q6PB30 78 aa1.91□□□□□ -2.1
ECHDC1-217ENST00000488087 Q6ZRX8 168 aa1.91□□□□□ -2.1
ECHDC1-217ENST00000488087 BRCA2P51587 3418 aa1.91□□□□□ -2.1
ECHDC1-217ENST00000488087 REV3LO60673 3130 aa1.91□□□□□ -2.1
ECHDC1-217ENST00000488087 URB1O60287 2271 aaKnown RBP1.91□□□□□ -2.1
ECHDC1-217ENST00000488087 MKI67P46013 3256 aaKnown RBP1.9□□□□□ -2.1
ECHDC1-217ENST00000488087 CACNA1BQ00975 2339 aa1.9□□□□□ -2.1
ECHDC1-217ENST00000488087 FAM186AA6NE01 2351 aa1.9□□□□□ -2.11
ECHDC1-217ENST00000488087 UQCR11O14957 56 aa1.9□□□□□ -2.11
ECHDC1-217ENST00000488087 LINC00472Q9H8W2 130 aa1.9□□□□□ -2.11
ECHDC1-217ENST00000488087 NOP10Q9NPE3 64 aaKnown RBP1.9□□□□□ -2.11
ECHDC1-217ENST00000488087 PRO0255Q9UI72 69 aa1.9□□□□□ -2.11
ECHDC1-217ENST00000488087 ALMS1Q8TCU4 4167 aa1.9□□□□□ -2.11
ECHDC1-217ENST00000488087 MMP24-AS1A0A0U1RRL7 71 aa1.89□□□□□ -2.11
ECHDC1-217ENST00000488087 ACYP2P14621 99 aa1.89□□□□□ -2.11
ECHDC1-217ENST00000488087 MIR22HGQ0VDD5 57 aa1.89□□□□□ -2.11
ECHDC1-217ENST00000488087 KRTAP25-1Q3LHN0 102 aa1.89□□□□□ -2.11
ECHDC1-217ENST00000488087 CLPSL2Q6UWE3 100 aa1.89□□□□□ -2.11
ECHDC1-217ENST00000488087 WFDC13Q8IUB5 93 aa1.89□□□□□ -2.11
ECHDC1-217ENST00000488087 AHCTF1Q8WYP5 2266 aa1.89□□□□□ -2.11
ECHDC1-217ENST00000488087 FRYLO94915 3013 aa1.89□□□□□ -2.11
ECHDC1-217ENST00000488087 IGLV10-54A0A075B6I4 117 aa1.88□□□□□ -2.11
ECHDC1-217ENST00000488087 A0A1B0GU69 56 aa1.88□□□□□ -2.11
ECHDC1-217ENST00000488087 SPRR1BP22528 89 aa1.88□□□□□ -2.11
ECHDC1-217ENST00000488087 LELP1Q5T871 98 aa1.88□□□□□ -2.11
ECHDC1-217ENST00000488087 WFDC10BQ8IUB3 73 aa1.88□□□□□ -2.11
ECHDC1-217ENST00000488087 C4orf3Q8WVX3 66 aa1.88□□□□□ -2.11
ECHDC1-217ENST00000488087 LAMA3Q16787 3333 aa1.88□□□□□ -2.11
ECHDC1-217ENST00000488087 KALRNO60229 2985 aa1.88□□□□□ -2.11
ECHDC1-217ENST00000488087 LAMA2P24043 3122 aaKnown RBP1.88□□□□□ -2.11
ECHDC1-217ENST00000488087 CUL9Q8IWT3 2517 aa1.87□□□□□ -2.11
ECHDC1-217ENST00000488087 CFAP47Q6ZTR5 3102 aa1.87□□□□□ -2.11
ECHDC1-217ENST00000488087 MGAQ8IWI9 3026 aa1.87□□□□□ -2.11
ECHDC1-217ENST00000488087 ANGP03950 147 aaKnown RBP1.87□□□□□ -2.11
ECHDC1-217ENST00000488087 MSMBP08118 114 aa1.87□□□□□ -2.11
ECHDC1-217ENST00000488087 CR1P17927 2039 aa1.87□□□□□ -2.11
ECHDC1-217ENST00000488087 WDFY3Q8IZQ1 3526 aa1.87□□□□□ -2.11
ECHDC1-217ENST00000488087 DMAC1Q96GE9 116 aa1.87□□□□□ -2.11
ECHDC1-217ENST00000488087 PRO3102Q9H379 93 aa1.87□□□□□ -2.11
ECHDC1-217ENST00000488087 R4GN34 69 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms