RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 ABCC6O95255 1503 aa1.11□□□□□ -2.23
PTCD3-214ENST00000483925 CACNA1HO95180 2353 aa1.11□□□□□ -2.23
PTCD3-214ENST00000483925 TTC28Q96AY4 2481 aa1.11□□□□□ -2.23
PTCD3-214ENST00000483925 PRXQ9BXM0 1461 aa1.11□□□□□ -2.23
PTCD3-214ENST00000483925 ETDCA0A1B0GVM5 59 aa1.1□□□□□ -2.23
PTCD3-214ENST00000483925 DDX60LQ5H9U9 1706 aaKnown RBP1.09□□□□□ -2.23
PTCD3-214ENST00000483925 NDUFA3O95167 84 aa1.09□□□□□ -2.23
PTCD3-214ENST00000483925 H1FX-AS1Q4G0G2 97 aa1.09□□□□□ -2.23
PTCD3-214ENST00000483925 PRO3102Q9H379 93 aa1.09□□□□□ -2.23
PTCD3-214ENST00000483925 MAST1Q9Y2H9 1570 aa1.08□□□□□ -2.24
PTCD3-214ENST00000483925 MEGF8Q7Z7M0 2845 aa1.08□□□□□ -2.24
PTCD3-214ENST00000483925 DEFB109BQ30KR1 87 aa1.08□□□□□ -2.24
PTCD3-214ENST00000483925 RNF17Q9BXT8 1623 aaKnown RBP1.07□□□□□ -2.24
PTCD3-214ENST00000483925 ALS2Q96Q42 1657 aa1.07□□□□□ -2.24
PTCD3-214ENST00000483925 PIEZO2Q9H5I5 2752 aa1.07□□□□□ -2.24
PTCD3-214ENST00000483925 CPS1P31327 1500 aa1.05□□□□□ -2.24
PTCD3-214ENST00000483925 GLI2P10070 1586 aa1.05□□□□□ -2.24
PTCD3-214ENST00000483925 SPTBN2O15020 2390 aa1.05□□□□□ -2.24
PTCD3-214ENST00000483925 C2CD3Q4AC94 2353 aa1.05□□□□□ -2.24
PTCD3-214ENST00000483925 K7EMI3 77 aa1.05□□□□□ -2.24
PTCD3-214ENST00000483925 SERF2P84101 59 aa1.05□□□□□ -2.24
PTCD3-214ENST00000483925 KRTAP19-3Q7Z4W3 81 aa1.05□□□□□ -2.24
PTCD3-214ENST00000483925 WFDC13Q8IUB5 93 aa1.05□□□□□ -2.24
PTCD3-214ENST00000483925 C3P01024 1663 aa1.04□□□□□ -2.24
PTCD3-214ENST00000483925 KLK9Q2XQG4 91 aa1.04□□□□□ -2.24
PTCD3-214ENST00000483925 LELP1Q5T871 98 aa1.04□□□□□ -2.24
PTCD3-214ENST00000483925 DOPEY2Q9Y3R5 2298 aa1.04□□□□□ -2.24
PTCD3-214ENST00000483925 PLCE1Q9P212 2302 aa1.04□□□□□ -2.24
PTCD3-214ENST00000483925 USF3Q68DE3 2245 aa1.03□□□□□ -2.24
PTCD3-214ENST00000483925 PTPRZ1P23471 2315 aaPredicted RBP1.03□□□□□ -2.24
PTCD3-214ENST00000483925 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.03□□□□□ -2.247e-7■■■■□ 20.6
PTCD3-214ENST00000483925 LINC00158P58513 81 aa1.03□□□□□ -2.24
PTCD3-214ENST00000483925 NMES1Q9C002 83 aa1.03□□□□□ -2.24
PTCD3-214ENST00000483925 PTPRQQ9UMZ3 2332 aa1.03□□□□□ -2.25
PTCD3-214ENST00000483925 DEPDC5O75140 1603 aa1.02□□□□□ -2.25
PTCD3-214ENST00000483925 POLQO75417 2590 aa1.02□□□□□ -2.25
PTCD3-214ENST00000483925 FCER1GP30273 86 aa1.02□□□□□ -2.25
PTCD3-214ENST00000483925 TJP1Q07157 1748 aa1.02□□□□□ -2.25
PTCD3-214ENST00000483925 SYCP2Q9BX26 1530 aa1.01□□□□□ -2.25
PTCD3-214ENST00000483925 SPINK1P00995 79 aa1.01□□□□□ -2.25
PTCD3-214ENST00000483925 NCBP2-AS2Q69YL0 99 aa1.01□□□□□ -2.25
PTCD3-214ENST00000483925 LY75O60449 1722 aa1.01□□□□□ -2.25
PTCD3-214ENST00000483925 ANK2Q01484 3957 aa1□□□□□ -2.25
PTCD3-214ENST00000483925 CRIP1P50238 77 aa1□□□□□ -2.25
PTCD3-214ENST00000483925 FRAS1Q86XX4 4008 aa0.99□□□□□ -2.25
PTCD3-214ENST00000483925 ABCA12Q86UK0 2595 aa0.99□□□□□ -2.25
PTCD3-214ENST00000483925 C4AP0C0L4 1744 aa0.98□□□□□ -2.25
PTCD3-214ENST00000483925 C4BP0C0L5 1744 aa0.98□□□□□ -2.25
PTCD3-214ENST00000483925 LYNX1G3V0Z9 82 aa0.98□□□□□ -2.25
PTCD3-214ENST00000483925 UGGT1Q9NYU2 1555 aa0.98□□□□□ -2.25
PTCD3-214ENST00000483925 TNCP24821 2201 aa0.97□□□□□ -2.25
PTCD3-214ENST00000483925 H0YAA0 97 aa0.97□□□□□ -2.25
PTCD3-214ENST00000483925 M0R1W7 72 aa0.97□□□□□ -2.25
PTCD3-214ENST00000483925 PRH1P02810 166 aa0.97□□□□□ -2.25
PTCD3-214ENST00000483925 ZNF469Q96JG9 3925 aaPredicted RBP0.96□□□□□ -2.25
PTCD3-214ENST00000483925 KIAA0586Q9BVV6 1533 aa0.96□□□□□ -2.26
PTCD3-214ENST00000483925 CNOT1A5YKK6 2376 aaKnown RBP0.96□□□□□ -2.26
PTCD3-214ENST00000483925 SMR3AQ99954 134 aa0.96□□□□□ -2.26
PTCD3-214ENST00000483925 BDP1A6H8Y1 2624 aa0.95□□□□□ -2.26
PTCD3-214ENST00000483925 KIF1AQ12756 1690 aa0.95□□□□□ -2.26
PTCD3-214ENST00000483925 KRTAP2-3P0C7H8 128 aa0.95□□□□□ -2.26
PTCD3-214ENST00000483925 KRTAP2-4Q9BYR9 128 aa0.95□□□□□ -2.26
PTCD3-214ENST00000483925 KRTAP2-1Q9BYU5 128 aa0.95□□□□□ -2.26
PTCD3-214ENST00000483925 CROCC2H7BZ55 1655 aa0.94□□□□□ -2.26
PTCD3-214ENST00000483925 CSMD3Q7Z407 3707 aa0.93□□□□□ -2.26
PTCD3-214ENST00000483925 PIEZO1Q92508 2521 aa0.93□□□□□ -2.26
PTCD3-214ENST00000483925 SPTBN1Q01082 2364 aaKnown RBP0.93□□□□□ -2.26
PTCD3-214ENST00000483925 ZNF292O60281 2723 aa0.93□□□□□ -2.26
PTCD3-214ENST00000483925 ADCY10Q96PN6 1610 aa0.93□□□□□ -2.26
PTCD3-214ENST00000483925 FANCD2Q9BXW9 1451 aa0.92□□□□□ -2.26
PTCD3-214ENST00000483925 F8P00451 2351 aa0.92□□□□□ -2.26
PTCD3-214ENST00000483925 U3KQA8 63 aa0.92□□□□□ -2.26
PTCD3-214ENST00000483925 CELSR2Q9HCU4 2923 aa0.92□□□□□ -2.26
PTCD3-214ENST00000483925 IGIPA6NJ69 53 aa0.91□□□□□ -2.26
PTCD3-214ENST00000483925 IAPPP10997 89 aa0.91□□□□□ -2.26
PTCD3-214ENST00000483925 MROH2AA6NES4 1674 aa0.91□□□□□ -2.26
PTCD3-214ENST00000483925 ITSN2Q9NZM3 1697 aa0.91□□□□□ -2.26
PTCD3-214ENST00000483925 CHD9Q3L8U1 2897 aa0.9□□□□□ -2.27
PTCD3-214ENST00000483925 MINOS1Q5TGZ0 78 aa0.9□□□□□ -2.27
PTCD3-214ENST00000483925 TPRP12270 2363 aaKnown RBP0.89□□□□□ -2.27
PTCD3-214ENST00000483925 SNRPGP15A8MWD9 76 aa0.89□□□□□ -2.27
PTCD3-214ENST00000483925 CLASP1Q7Z460 1538 aa0.89□□□□□ -2.27
PTCD3-214ENST00000483925 LOC730098B7Z3J9 87 aa0.88□□□□□ -2.27
PTCD3-214ENST00000483925 DEFB130BP0DP73 79 aa0.87□□□□□ -2.27
PTCD3-214ENST00000483925 DEFB130AP0DP74 79 aa0.87□□□□□ -2.27
PTCD3-214ENST00000483925 FBN2P35556 2912 aa0.87□□□□□ -2.27
PTCD3-214ENST00000483925 PLNP26678 52 aa0.86□□□□□ -2.27
PTCD3-214ENST00000483925 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
PTCD3-214ENST00000483925 PKDREJQ9NTG1 2253 aa0.86□□□□□ -2.27
PTCD3-214ENST00000483925 NOTCH1P46531 2555 aa0.85□□□□□ -2.27
PTCD3-214ENST00000483925 H0YGX0 51 aa0.85□□□□□ -2.27
PTCD3-214ENST00000483925 CMC2Q9NRP2 79 aa0.85□□□□□ -2.27
PTCD3-214ENST00000483925 TMEM167BQ9NRX6 74 aa0.85□□□□□ -2.27
PTCD3-214ENST00000483925 C6orf48Q9UBA6 75 aa0.85□□□□□ -2.27
PTCD3-214ENST00000483925 GVINP1Q7Z2Y8 2422 aa0.85□□□□□ -2.27
PTCD3-214ENST00000483925 AKAP6Q13023 2319 aa0.84□□□□□ -2.28
PTCD3-214ENST00000483925 APCP25054 2843 aa0.83□□□□□ -2.28
PTCD3-214ENST00000483925 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
PTCD3-214ENST00000483925 EFCAB6Q5THR3 1501 aa0.83□□□□□ -2.28
PTCD3-214ENST00000483925 ABCC8Q09428 1581 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 238.9 ms